Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Snord13-201ENSMUST00000157627 104 ntBASIC1.32□□□□□ -2.2
Upf3aQ3ULJ3 Gm24677-201ENSMUST00000158755 150 ntBASIC1.32□□□□□ -2.2
Upf3aQ3ULJ3 Gm26159-201ENSMUST00000158968 104 ntBASIC1.32□□□□□ -2.2
Upf3aQ3ULJ3 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.32□□□□□ -2.2
Upf3aQ3ULJ3 Gm27517-201ENSMUST00000184347 236 ntBASIC1.32□□□□□ -2.2
Upf3aQ3ULJ3 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC1.32□□□□□ -2.2
Upf3aQ3ULJ3 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.32□□□□□ -2.2
Upf3aQ3ULJ3 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.32□□□□□ -2.2
Upf3aQ3ULJ3 Gm44654-201ENSMUST00000208052 329 ntBASIC1.32□□□□□ -2.2
Upf3aQ3ULJ3 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.32□□□□□ -2.2
Upf3aQ3ULJ3 Gm24356-201ENSMUST00000082859 106 ntBASIC1.32□□□□□ -2.2
Upf3aQ3ULJ3 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.32□□□□□ -2.2
Upf3aQ3ULJ3 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Upf3aQ3ULJ3 Gm22085-201ENSMUST00000158344 110 ntBASIC1.31□□□□□ -2.2
Upf3aQ3ULJ3 Gm26405-201ENSMUST00000158495 100 ntBASIC1.31□□□□□ -2.2
Upf3aQ3ULJ3 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Upf3aQ3ULJ3 Gm26435-201ENSMUST00000179026 107 ntBASIC1.31□□□□□ -2.2
Upf3aQ3ULJ3 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC1.31□□□□□ -2.2
Upf3aQ3ULJ3 Gm21064-202ENSMUST00000190583 278 ntBASIC1.31□□□□□ -2.2
Upf3aQ3ULJ3 Gm35736-201ENSMUST00000203681 313 ntBASIC1.31□□□□□ -2.2
Upf3aQ3ULJ3 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC1.31□□□□□ -2.2
Upf3aQ3ULJ3 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC1.31□□□□□ -2.2
Upf3aQ3ULJ3 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.31□□□□□ -2.2
Upf3aQ3ULJ3 Snord14a-201ENSMUST00000082807 87 ntBASIC1.31□□□□□ -2.2
Upf3aQ3ULJ3 Gm25409-201ENSMUST00000083764 131 ntBASIC1.31□□□□□ -2.2
Upf3aQ3ULJ3 Gm26329-201ENSMUST00000093723 110 ntBASIC1.31□□□□□ -2.2
Upf3aQ3ULJ3 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.31□□□□□ -2.2
Upf3aQ3ULJ3 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.31□□□□□ -2.2
Upf3aQ3ULJ3 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Upf3aQ3ULJ3 Gm9059-201ENSMUST00000118319 183 ntBASIC1.3□□□□□ -2.2
Upf3aQ3ULJ3 Gm15861-201ENSMUST00000120979 339 ntBASIC1.3□□□□□ -2.2
Upf3aQ3ULJ3 Gm8121-201ENSMUST00000153583 499 ntBASIC1.3□□□□□ -2.2
Upf3aQ3ULJ3 Gm26150-201ENSMUST00000157426 151 ntBASIC1.3□□□□□ -2.2
Upf3aQ3ULJ3 Rnu7-201ENSMUST00000158458 62 ntBASIC1.3□□□□□ -2.2
Upf3aQ3ULJ3 Mir3057-201ENSMUST00000175040 91 ntBASIC1.3□□□□□ -2.2
Upf3aQ3ULJ3 Gm22862-201ENSMUST00000178593 121 ntBASIC1.3□□□□□ -2.2
Upf3aQ3ULJ3 Gm27668-201ENSMUST00000184188 120 ntBASIC1.3□□□□□ -2.2
Upf3aQ3ULJ3 Gm28288-201ENSMUST00000191019 214 ntBASIC1.3□□□□□ -2.2
Upf3aQ3ULJ3 Gm43250-201ENSMUST00000196536 273 ntBASIC1.3□□□□□ -2.2
Upf3aQ3ULJ3 Gm44483-201ENSMUST00000197203 97 ntBASIC1.3□□□□□ -2.2
Upf3aQ3ULJ3 Gm20144-201ENSMUST00000203031 165 ntBASIC1.3□□□□□ -2.2
Upf3aQ3ULJ3 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.3□□□□□ -2.2
Upf3aQ3ULJ3 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.3□□□□□ -2.2
Upf3aQ3ULJ3 Snord42a-201ENSMUST00000082606 65 ntBASIC1.3□□□□□ -2.2
Upf3aQ3ULJ3 Mir32-201ENSMUST00000083610 70 ntBASIC1.3□□□□□ -2.2
Upf3aQ3ULJ3 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Upf3aQ3ULJ3 Mir465b-1-201ENSMUST00000103940 79 ntBASIC1.29□□□□□ -2.2
Upf3aQ3ULJ3 Mir465b-2-201ENSMUST00000104662 79 ntBASIC1.29□□□□□ -2.2
Upf3aQ3ULJ3 Gm14307-201ENSMUST00000118930 291 ntBASIC1.29□□□□□ -2.2
Upf3aQ3ULJ3 Gm14297-201ENSMUST00000129110 291 ntBASIC1.29□□□□□ -2.2
Upf3aQ3ULJ3 Gm16362-201ENSMUST00000135189 214 ntBASIC1.29□□□□□ -2.2
Upf3aQ3ULJ3 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Upf3aQ3ULJ3 Gm16358-201ENSMUST00000146046 210 ntBASIC1.29□□□□□ -2.2
Upf3aQ3ULJ3 Gm23854-201ENSMUST00000158378 108 ntBASIC1.29□□□□□ -2.2
Upf3aQ3ULJ3 Gm25768-201ENSMUST00000158570 98 ntBASIC1.29□□□□□ -2.2
Upf3aQ3ULJ3 Gm17052-201ENSMUST00000165496 289 ntBASIC1.29□□□□□ -2.2
Upf3aQ3ULJ3 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.29□□□□□ -2.2
Upf3aQ3ULJ3 Gm27711-201ENSMUST00000183802 118 ntBASIC1.29□□□□□ -2.2
Upf3aQ3ULJ3 Gm27656-201ENSMUST00000185055 80 ntBASIC1.29□□□□□ -2.2
Upf3aQ3ULJ3 Gm9156-201ENSMUST00000189660 463 ntBASIC1.29□□□□□ -2.2
Upf3aQ3ULJ3 Gm28408-201ENSMUST00000191557 463 ntBASIC1.29□□□□□ -2.2
Upf3aQ3ULJ3 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.29□□□□□ -2.2
Upf3aQ3ULJ3 Gm44491-201ENSMUST00000196794 96 ntBASIC1.29□□□□□ -2.2
Upf3aQ3ULJ3 Mir7661-201ENSMUST00000197023 61 ntBASIC1.29□□□□□ -2.2
Upf3aQ3ULJ3 Gm45116-201ENSMUST00000207392 275 ntBASIC1.29□□□□□ -2.2
Upf3aQ3ULJ3 Gm46997-201ENSMUST00000222108 217 ntBASIC1.29□□□□□ -2.2
Upf3aQ3ULJ3 AC173345.2-201ENSMUST00000222795 153 ntBASIC1.29□□□□□ -2.2
Upf3aQ3ULJ3 AC183092.1-201ENSMUST00000224301 153 ntBASIC1.29□□□□□ -2.2
Upf3aQ3ULJ3 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.29□□□□□ -2.2
Upf3aQ3ULJ3 Gm10092-201ENSMUST00000077110 180 ntBASIC1.29□□□□□ -2.2
Upf3aQ3ULJ3 Snord118-201ENSMUST00000082965 135 ntBASIC1.29□□□□□ -2.2
Upf3aQ3ULJ3 Gm24536-201ENSMUST00000083144 107 ntBASIC1.29□□□□□ -2.2
Upf3aQ3ULJ3 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Upf3aQ3ULJ3 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Upf3aQ3ULJ3 Gm25759-201ENSMUST00000103988 129 ntBASIC1.28□□□□□ -2.2
Upf3aQ3ULJ3 Gm22021-201ENSMUST00000104353 107 ntBASIC1.28□□□□□ -2.2
Upf3aQ3ULJ3 Gm23907-201ENSMUST00000104595 189 ntBASIC1.28□□□□□ -2.2
Upf3aQ3ULJ3 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Upf3aQ3ULJ3 Gm24632-201ENSMUST00000122770 323 ntBASIC1.28□□□□□ -2.2
Upf3aQ3ULJ3 Gm22281-201ENSMUST00000157198 103 ntBASIC1.28□□□□□ -2.2
Upf3aQ3ULJ3 Gm23779-201ENSMUST00000157938 64 ntBASIC1.28□□□□□ -2.2
Upf3aQ3ULJ3 Gm24942-201ENSMUST00000158328 114 ntBASIC1.28□□□□□ -2.2
Upf3aQ3ULJ3 Gm22945-201ENSMUST00000158557 157 ntBASIC1.28□□□□□ -2.2
Upf3aQ3ULJ3 Gm24229-201ENSMUST00000158830 118 ntBASIC1.28□□□□□ -2.2
Upf3aQ3ULJ3 Gm23921-201ENSMUST00000175258 107 ntBASIC1.28□□□□□ -2.2
Upf3aQ3ULJ3 Gm25671-201ENSMUST00000178612 105 ntBASIC1.28□□□□□ -2.2
Upf3aQ3ULJ3 Gm23307-201ENSMUST00000179167 105 ntBASIC1.28□□□□□ -2.2
Upf3aQ3ULJ3 Gm25286-201ENSMUST00000179790 105 ntBASIC1.28□□□□□ -2.2
Upf3aQ3ULJ3 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC1.28□□□□□ -2.2
Upf3aQ3ULJ3 Gm27793-201ENSMUST00000183405 76 ntBASIC1.28□□□□□ -2.2
Upf3aQ3ULJ3 Gm45456-201ENSMUST00000210841 243 ntBASIC1.28□□□□□ -2.2
Upf3aQ3ULJ3 Gm11351-202ENSMUST00000225724 478 ntBASIC1.28□□□□□ -2.2
Upf3aQ3ULJ3 Gm24625-201ENSMUST00000082622 130 ntBASIC1.28□□□□□ -2.2
Upf3aQ3ULJ3 Gm25937-201ENSMUST00000083912 107 ntBASIC1.28□□□□□ -2.2
Upf3aQ3ULJ3 Gm15102-201ENSMUST00000118740 1502 ntBASIC1.28□□□□□ -2.2
Upf3aQ3ULJ3 Gm15101-201ENSMUST00000178818 1502 ntBASIC1.28□□□□□ -2.2
Upf3aQ3ULJ3 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
Upf3aQ3ULJ3 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.27□□□□□ -2.21
Upf3aQ3ULJ3 Gm22003-201ENSMUST00000101885 107 ntBASIC1.27□□□□□ -2.21
Upf3aQ3ULJ3 Gm22032-201ENSMUST00000116946 116 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 105.4 ms