Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Mir29c-201ENSMUST00000083614 88 ntBASIC1.59□□□□□ -2.15
Trafd1Q3UDK1 Snora33-201ENSMUST00000093556 129 ntBASIC1.59□□□□□ -2.15
Trafd1Q3UDK1 AC160115.1-201ENSMUST00000224678 1574 ntBASIC1.59□□□□□ -2.16
Trafd1Q3UDK1 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Trafd1Q3UDK1 Gm26080-201ENSMUST00000104069 131 ntBASIC1.58□□□□□ -2.16
Trafd1Q3UDK1 Gm22338-201ENSMUST00000157715 129 ntBASIC1.58□□□□□ -2.16
Trafd1Q3UDK1 Gm22731-201ENSMUST00000158086 94 ntBASIC1.58□□□□□ -2.16
Trafd1Q3UDK1 Gm22537-201ENSMUST00000158172 199 ntBASIC1.58□□□□□ -2.16
Trafd1Q3UDK1 Gm24501-201ENSMUST00000158452 62 ntBASIC1.58□□□□□ -2.16
Trafd1Q3UDK1 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.58□□□□□ -2.16
Trafd1Q3UDK1 Gm20923-201ENSMUST00000190009 319 ntBASIC1.58□□□□□ -2.16
Trafd1Q3UDK1 Gm21088-201ENSMUST00000190875 316 ntBASIC1.58□□□□□ -2.16
Trafd1Q3UDK1 Gm18433-201ENSMUST00000192747 197 ntBASIC1.58□□□□□ -2.16
Trafd1Q3UDK1 Gm42960-201ENSMUST00000202160 241 ntBASIC1.58□□□□□ -2.16
Trafd1Q3UDK1 Gm45005-201ENSMUST00000206640 157 ntBASIC1.58□□□□□ -2.16
Trafd1Q3UDK1 Gm44909-201ENSMUST00000208756 165 ntBASIC1.58□□□□□ -2.16
Trafd1Q3UDK1 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.58□□□□□ -2.16
Trafd1Q3UDK1 Gm24977-201ENSMUST00000083106 163 ntBASIC1.58□□□□□ -2.16
Trafd1Q3UDK1 Gm25793-201ENSMUST00000083287 107 ntBASIC1.58□□□□□ -2.16
Trafd1Q3UDK1 Mir148b-201ENSMUST00000083626 97 ntBASIC1.58□□□□□ -2.16
Trafd1Q3UDK1 Gm24163-201ENSMUST00000093660 132 ntBASIC1.58□□□□□ -2.16
Trafd1Q3UDK1 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.57□□□□□ -2.16
Trafd1Q3UDK1 Mup-ps22-201ENSMUST00000121611 243 ntBASIC1.57□□□□□ -2.16
Trafd1Q3UDK1 Gm22665-201ENSMUST00000158720 275 ntBASIC1.57□□□□□ -2.16
Trafd1Q3UDK1 Gm23090-201ENSMUST00000177331 78 ntBASIC1.57□□□□□ -2.16
Trafd1Q3UDK1 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Trafd1Q3UDK1 Gm23003-201ENSMUST00000179948 107 ntBASIC1.57□□□□□ -2.16
Trafd1Q3UDK1 Gm37889-201ENSMUST00000194174 251 ntBASIC1.57□□□□□ -2.16
Trafd1Q3UDK1 Gm37801-201ENSMUST00000194754 274 ntBASIC1.57□□□□□ -2.16
Trafd1Q3UDK1 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC1.57□□□□□ -2.16
Trafd1Q3UDK1 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.57□□□□□ -2.16
Trafd1Q3UDK1 Gm45754-201ENSMUST00000212380 279 ntBASIC1.57□□□□□ -2.16
Trafd1Q3UDK1 Gm29818-201ENSMUST00000218070 165 ntBASIC1.57□□□□□ -2.16
Trafd1Q3UDK1 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.57□□□□□ -2.16
Trafd1Q3UDK1 Gm5899-201ENSMUST00000071770 270 ntBASIC1.57□□□□□ -2.16
Trafd1Q3UDK1 Gm23378-201ENSMUST00000082942 107 ntBASIC1.57□□□□□ -2.16
Trafd1Q3UDK1 Gm22972-201ENSMUST00000083297 131 ntBASIC1.57□□□□□ -2.16
Trafd1Q3UDK1 Gm22294-201ENSMUST00000083308 104 ntBASIC1.57□□□□□ -2.16
Trafd1Q3UDK1 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Trafd1Q3UDK1 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Trafd1Q3UDK1 Gm12417-201ENSMUST00000119153 403 ntBASIC1.56□□□□□ -2.16
Trafd1Q3UDK1 Gm27723-201ENSMUST00000157398 63 ntBASIC1.56□□□□□ -2.16
Trafd1Q3UDK1 Gm22315-201ENSMUST00000158010 143 ntBASIC1.56□□□□□ -2.16
Trafd1Q3UDK1 Gm17052-201ENSMUST00000165496 289 ntBASIC1.56□□□□□ -2.16
Trafd1Q3UDK1 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.56□□□□□ -2.16
Trafd1Q3UDK1 Gm24333-201ENSMUST00000175101 84 ntBASIC1.56□□□□□ -2.16
Trafd1Q3UDK1 Gm7958-201ENSMUST00000178255 468 ntBASIC1.56□□□□□ -2.16
Trafd1Q3UDK1 Gm23714-201ENSMUST00000179259 105 ntBASIC1.56□□□□□ -2.16
Trafd1Q3UDK1 Gm24390-201ENSMUST00000179578 62 ntBASIC1.56□□□□□ -2.16
Trafd1Q3UDK1 Gm7950-201ENSMUST00000179633 468 ntBASIC1.56□□□□□ -2.16
Trafd1Q3UDK1 Gm27793-201ENSMUST00000183405 76 ntBASIC1.56□□□□□ -2.16
Trafd1Q3UDK1 Gm27722-201ENSMUST00000183908 76 ntBASIC1.56□□□□□ -2.16
Trafd1Q3UDK1 Gm27540-201ENSMUST00000184950 187 ntBASIC1.56□□□□□ -2.16
Trafd1Q3UDK1 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC1.56□□□□□ -2.16
Trafd1Q3UDK1 Gm18546-201ENSMUST00000197245 676 ntBASIC1.56□□□□□ -2.16
Trafd1Q3UDK1 Gm43035-201ENSMUST00000197626 517 ntBASIC1.56□□□□□ -2.16
Trafd1Q3UDK1 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.56□□□□□ -2.16
Trafd1Q3UDK1 Gm43220-201ENSMUST00000199299 282 ntBASIC1.56□□□□□ -2.16
Trafd1Q3UDK1 Gm35736-201ENSMUST00000203681 313 ntBASIC1.56□□□□□ -2.16
Trafd1Q3UDK1 Gm44055-201ENSMUST00000204376 247 ntBASIC1.56□□□□□ -2.16
Trafd1Q3UDK1 Gm44962-201ENSMUST00000206460 279 ntBASIC1.56□□□□□ -2.16
Trafd1Q3UDK1 Gm46997-201ENSMUST00000222108 217 ntBASIC1.56□□□□□ -2.16
Trafd1Q3UDK1 AC173345.2-201ENSMUST00000222795 153 ntBASIC1.56□□□□□ -2.16
Trafd1Q3UDK1 AC183092.1-201ENSMUST00000224301 153 ntBASIC1.56□□□□□ -2.16
Trafd1Q3UDK1 Gm24412-201ENSMUST00000083426 109 ntBASIC1.56□□□□□ -2.16
Trafd1Q3UDK1 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Trafd1Q3UDK1 Gm23015-201ENSMUST00000104145 128 ntBASIC1.55□□□□□ -2.16
Trafd1Q3UDK1 Gm24079-201ENSMUST00000104352 132 ntBASIC1.55□□□□□ -2.16
Trafd1Q3UDK1 Gm15213-201ENSMUST00000122098 216 ntBASIC1.55□□□□□ -2.16
Trafd1Q3UDK1 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.55□□□□□ -2.16
Trafd1Q3UDK1 Gm22281-201ENSMUST00000157198 103 ntBASIC1.55□□□□□ -2.16
Trafd1Q3UDK1 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.55□□□□□ -2.16
Trafd1Q3UDK1 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.55□□□□□ -2.16
Trafd1Q3UDK1 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.55□□□□□ -2.16
Trafd1Q3UDK1 Gm28992-201ENSMUST00000190534 139 ntBASIC1.55□□□□□ -2.16
Trafd1Q3UDK1 Gm29490-201ENSMUST00000190923 342 ntBASIC1.55□□□□□ -2.16
Trafd1Q3UDK1 Gm32175-201ENSMUST00000193641 346 ntBASIC1.55□□□□□ -2.16
Trafd1Q3UDK1 Gm26447-201ENSMUST00000082448 129 ntBASIC1.55□□□□□ -2.16
Trafd1Q3UDK1 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.55□□□□□ -2.16
Trafd1Q3UDK1 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Trafd1Q3UDK1 Mir875-201ENSMUST00000104698 78 ntBASIC1.54□□□□□ -2.16
Trafd1Q3UDK1 Mir873a-201ENSMUST00000104863 77 ntBASIC1.54□□□□□ -2.16
Trafd1Q3UDK1 Gm13967-201ENSMUST00000120404 380 ntBASIC1.54□□□□□ -2.16
Trafd1Q3UDK1 Gm11606-201ENSMUST00000120706 617 ntBASIC1.54□□□□□ -2.16
Trafd1Q3UDK1 Gm24598-201ENSMUST00000122510 74 ntBASIC1.54□□□□□ -2.16
Trafd1Q3UDK1 Gm24818-201ENSMUST00000175093 161 ntBASIC1.54□□□□□ -2.16
Trafd1Q3UDK1 Gm25253-201ENSMUST00000179958 107 ntBASIC1.54□□□□□ -2.16
Trafd1Q3UDK1 Gm27265-201ENSMUST00000183559 77 ntBASIC1.54□□□□□ -2.16
Trafd1Q3UDK1 Gm37918-201ENSMUST00000192071 120 ntBASIC1.54□□□□□ -2.16
Trafd1Q3UDK1 Gm38060-201ENSMUST00000194822 464 ntBASIC1.54□□□□□ -2.16
Trafd1Q3UDK1 Mir3535-201ENSMUST00000197651 147 ntBASIC1.54□□□□□ -2.16
Trafd1Q3UDK1 Mir3970-201ENSMUST00000199287 90 ntBASIC1.54□□□□□ -2.16
Trafd1Q3UDK1 Snord43-201ENSMUST00000199549 108 ntBASIC1.54□□□□□ -2.16
Trafd1Q3UDK1 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Trafd1Q3UDK1 Gm22571-201ENSMUST00000082984 70 ntBASIC1.54□□□□□ -2.16
Trafd1Q3UDK1 Gm25789-201ENSMUST00000083294 76 ntBASIC1.54□□□□□ -2.16
Trafd1Q3UDK1 Gm23970-201ENSMUST00000083319 107 ntBASIC1.54□□□□□ -2.16
Trafd1Q3UDK1 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.54□□□□□ -2.16
Trafd1Q3UDK1 Gm24116-201ENSMUST00000103975 107 ntBASIC1.53□□□□□ -2.16
Trafd1Q3UDK1 Gm23013-201ENSMUST00000104146 106 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms