Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm24480-201ENSMUST00000157442 103 ntBASIC2.94□□□□□ -1.94
Ddb1Q3U1J4 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.94□□□□□ -1.94
Ddb1Q3U1J4 Gm17528-201ENSMUST00000171026 239 ntBASIC2.94□□□□□ -1.94
Ddb1Q3U1J4 Gm28627-201ENSMUST00000186141 453 ntBASIC2.94□□□□□ -1.94
Ddb1Q3U1J4 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.94□□□□□ -1.94
Ddb1Q3U1J4 Gm43427-201ENSMUST00000198188 331 ntBASIC2.94□□□□□ -1.94
Ddb1Q3U1J4 Gm42774-201ENSMUST00000198854 283 ntBASIC2.94□□□□□ -1.94
Ddb1Q3U1J4 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.94□□□□□ -1.94
Ddb1Q3U1J4 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
Ddb1Q3U1J4 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
Ddb1Q3U1J4 Gm6897-201ENSMUST00000117714 138 ntBASIC2.93□□□□□ -1.94
Ddb1Q3U1J4 Gm14758-201ENSMUST00000119104 138 ntBASIC2.93□□□□□ -1.94
Ddb1Q3U1J4 Gm25115-201ENSMUST00000157187 140 ntBASIC2.93□□□□□ -1.94
Ddb1Q3U1J4 Gm24010-201ENSMUST00000157731 282 ntBASIC2.93□□□□□ -1.94
Ddb1Q3U1J4 Mir669n-201ENSMUST00000158636 54 ntBASIC2.93□□□□□ -1.94
Ddb1Q3U1J4 Gm24736-201ENSMUST00000158862 130 ntBASIC2.93□□□□□ -1.94
Ddb1Q3U1J4 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Ddb1Q3U1J4 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.93□□□□□ -1.94
Ddb1Q3U1J4 Gm25789-201ENSMUST00000083294 76 ntBASIC2.93□□□□□ -1.94
Ddb1Q3U1J4 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.93□□□□□ -1.94
Ddb1Q3U1J4 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Ddb1Q3U1J4 Gm24121-201ENSMUST00000102029 106 ntBASIC2.92□□□□□ -1.94
Ddb1Q3U1J4 Gm14602-201ENSMUST00000118625 340 ntBASIC2.92□□□□□ -1.94
Ddb1Q3U1J4 Gm23535-201ENSMUST00000157542 106 ntBASIC2.92□□□□□ -1.94
Ddb1Q3U1J4 Gm22416-201ENSMUST00000158590 88 ntBASIC2.92□□□□□ -1.94
Ddb1Q3U1J4 Gm25119-201ENSMUST00000158815 88 ntBASIC2.92□□□□□ -1.94
Ddb1Q3U1J4 Gm25836-201ENSMUST00000158918 123 ntBASIC2.92□□□□□ -1.94
Ddb1Q3U1J4 Gm27793-201ENSMUST00000183405 76 ntBASIC2.92□□□□□ -1.94
Ddb1Q3U1J4 Gm8031-201ENSMUST00000213430 626 ntBASIC2.92□□□□□ -1.94
Ddb1Q3U1J4 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.92□□□□□ -1.94
Ddb1Q3U1J4 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.92□□□□□ -1.94
Ddb1Q3U1J4 Gm23246-201ENSMUST00000083371 67 ntBASIC2.92□□□□□ -1.94
Ddb1Q3U1J4 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.91□□□□□ -1.94
Ddb1Q3U1J4 Gm12512-201ENSMUST00000119620 217 ntBASIC2.91□□□□□ -1.94
Ddb1Q3U1J4 Gm24594-201ENSMUST00000122502 99 ntBASIC2.91□□□□□ -1.94
Ddb1Q3U1J4 Gm26026-201ENSMUST00000122726 123 ntBASIC2.91□□□□□ -1.94
Ddb1Q3U1J4 Gm22337-201ENSMUST00000157721 132 ntBASIC2.91□□□□□ -1.94
Ddb1Q3U1J4 Gm24053-201ENSMUST00000158620 105 ntBASIC2.91□□□□□ -1.94
Ddb1Q3U1J4 Gm6788-201ENSMUST00000166459 270 ntBASIC2.91□□□□□ -1.94
Ddb1Q3U1J4 Gm25933-201ENSMUST00000178943 108 ntBASIC2.91□□□□□ -1.94
Ddb1Q3U1J4 Gm19257-201ENSMUST00000186121 183 ntBASIC2.91□□□□□ -1.94
Ddb1Q3U1J4 Gm44938-201ENSMUST00000208614 427 ntBASIC2.91□□□□□ -1.94
Ddb1Q3U1J4 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.91□□□□□ -1.94
Ddb1Q3U1J4 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Ddb1Q3U1J4 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Ddb1Q3U1J4 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
Ddb1Q3U1J4 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Ddb1Q3U1J4 Gm24280-201ENSMUST00000104237 134 ntBASIC2.9□□□□□ -1.95
Ddb1Q3U1J4 Gm13885-201ENSMUST00000117569 187 ntBASIC2.9□□□□□ -1.95
Ddb1Q3U1J4 Gm13345-201ENSMUST00000121928 228 ntBASIC2.9□□□□□ -1.95
Ddb1Q3U1J4 n-R5s150-201ENSMUST00000122705 108 ntBASIC2.9□□□□□ -1.95
Ddb1Q3U1J4 Gm23381-201ENSMUST00000157676 94 ntBASIC2.9□□□□□ -1.95
Ddb1Q3U1J4 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.9□□□□□ -1.95
Ddb1Q3U1J4 Gm22286-201ENSMUST00000179708 107 ntBASIC2.9□□□□□ -1.95
Ddb1Q3U1J4 Gm25253-201ENSMUST00000179958 107 ntBASIC2.9□□□□□ -1.95
Ddb1Q3U1J4 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.9□□□□□ -1.95
Ddb1Q3U1J4 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.9□□□□□ -1.95
Ddb1Q3U1J4 Mir3087-201ENSMUST00000199405 56 ntBASIC2.9□□□□□ -1.95
Ddb1Q3U1J4 Gm44555-201ENSMUST00000209008 148 ntBASIC2.9□□□□□ -1.95
Ddb1Q3U1J4 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
Ddb1Q3U1J4 Gm25538-201ENSMUST00000101943 107 ntBASIC2.89□□□□□ -1.95
Ddb1Q3U1J4 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Ddb1Q3U1J4 Gm23492-201ENSMUST00000116837 115 ntBASIC2.89□□□□□ -1.95
Ddb1Q3U1J4 Gm25888-201ENSMUST00000157778 302 ntBASIC2.89□□□□□ -1.95
Ddb1Q3U1J4 Gm25015-201ENSMUST00000158400 128 ntBASIC2.89□□□□□ -1.95
Ddb1Q3U1J4 Gm23350-201ENSMUST00000158429 103 ntBASIC2.89□□□□□ -1.95
Ddb1Q3U1J4 Gm27476-201ENSMUST00000183366 104 ntBASIC2.89□□□□□ -1.95
Ddb1Q3U1J4 Gm27753-201ENSMUST00000184742 203 ntBASIC2.89□□□□□ -1.95
Ddb1Q3U1J4 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.89□□□□□ -1.95
Ddb1Q3U1J4 Gm24625-201ENSMUST00000082622 130 ntBASIC2.89□□□□□ -1.95
Ddb1Q3U1J4 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
Ddb1Q3U1J4 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
Ddb1Q3U1J4 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Ddb1Q3U1J4 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.88□□□□□ -1.95
Ddb1Q3U1J4 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Ddb1Q3U1J4 Gm23109-201ENSMUST00000116867 126 ntBASIC2.88□□□□□ -1.95
Ddb1Q3U1J4 Gm22193-201ENSMUST00000116868 76 ntBASIC2.88□□□□□ -1.95
Ddb1Q3U1J4 Mir1936-201ENSMUST00000158699 93 ntBASIC2.88□□□□□ -1.95
Ddb1Q3U1J4 Gm25834-201ENSMUST00000158916 101 ntBASIC2.88□□□□□ -1.95
Ddb1Q3U1J4 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.88□□□□□ -1.95
Ddb1Q3U1J4 Gm32175-201ENSMUST00000193641 346 ntBASIC2.88□□□□□ -1.95
Ddb1Q3U1J4 AC159896.1-201ENSMUST00000215264 215 ntBASIC2.88□□□□□ -1.95
Ddb1Q3U1J4 AC158982.2-201ENSMUST00000226283 184 ntBASIC2.88□□□□□ -1.95
Ddb1Q3U1J4 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Ddb1Q3U1J4 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Ddb1Q3U1J4 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Ddb1Q3U1J4 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Ddb1Q3U1J4 Gm14652-201ENSMUST00000118479 235 ntBASIC2.87□□□□□ -1.95
Ddb1Q3U1J4 Gm24896-201ENSMUST00000122741 135 ntBASIC2.87□□□□□ -1.95
Ddb1Q3U1J4 Gm26105-201ENSMUST00000157253 190 ntBASIC2.87□□□□□ -1.95
Ddb1Q3U1J4 Gm22097-201ENSMUST00000157929 278 ntBASIC2.87□□□□□ -1.95
Ddb1Q3U1J4 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC2.87□□□□□ -1.95
Ddb1Q3U1J4 Gm43676-201ENSMUST00000197532 540 ntBASIC2.87□□□□□ -1.95
Ddb1Q3U1J4 Mir1291-201ENSMUST00000199842 117 ntBASIC2.87□□□□□ -1.95
Ddb1Q3U1J4 Gm44478-201ENSMUST00000204875 114 ntBASIC2.87□□□□□ -1.95
Ddb1Q3U1J4 AC157476.1-201ENSMUST00000215555 169 ntBASIC2.87□□□□□ -1.95
Ddb1Q3U1J4 AC154636.2-201ENSMUST00000222538 161 ntBASIC2.87□□□□□ -1.95
Ddb1Q3U1J4 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC2.87□□□□□ -1.95
Ddb1Q3U1J4 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.87□□□□□ -1.95
Ddb1Q3U1J4 AC098718.2-201ENSMUST00000226822 285 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 251.3 ms