Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.24□□□□□ -2.05
Cdx4Q07424 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
Cdx4Q07424 Gm8260-201ENSMUST00000119230 353 ntBASIC2.24□□□□□ -2.05
Cdx4Q07424 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.24□□□□□ -2.05
Cdx4Q07424 Gm11471-201ENSMUST00000121824 198 ntBASIC2.24□□□□□ -2.05
Cdx4Q07424 Gm15466-201ENSMUST00000122299 333 ntBASIC2.24□□□□□ -2.05
Cdx4Q07424 Gm23655-201ENSMUST00000122627 105 ntBASIC2.24□□□□□ -2.05
Cdx4Q07424 Mir1936-201ENSMUST00000158699 93 ntBASIC2.24□□□□□ -2.05
Cdx4Q07424 Gm23268-201ENSMUST00000175494 78 ntBASIC2.24□□□□□ -2.05
Cdx4Q07424 Gm24388-201ENSMUST00000177872 107 ntBASIC2.24□□□□□ -2.05
Cdx4Q07424 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.24□□□□□ -2.05
Cdx4Q07424 Mir3969-201ENSMUST00000197106 92 ntBASIC2.24□□□□□ -2.05
Cdx4Q07424 Gm43676-201ENSMUST00000197532 540 ntBASIC2.24□□□□□ -2.05
Cdx4Q07424 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC2.24□□□□□ -2.05
Cdx4Q07424 AC164086.1-201ENSMUST00000221038 289 ntBASIC2.24□□□□□ -2.05
Cdx4Q07424 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.24□□□□□ -2.05
Cdx4Q07424 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Cdx4Q07424 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.24□□□□□ -2.05
Cdx4Q07424 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.24□□□□□ -2.05
Cdx4Q07424 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.24□□□□□ -2.05
Cdx4Q07424 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Cdx4Q07424 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Cdx4Q07424 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Cdx4Q07424 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
Cdx4Q07424 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
Cdx4Q07424 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.23□□□□□ -2.05
Cdx4Q07424 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.23□□□□□ -2.05
Cdx4Q07424 Gm23772-201ENSMUST00000104433 102 ntBASIC2.23□□□□□ -2.05
Cdx4Q07424 Gm15067-201ENSMUST00000119534 156 ntBASIC2.23□□□□□ -2.05
Cdx4Q07424 Gm25889-201ENSMUST00000157775 107 ntBASIC2.23□□□□□ -2.05
Cdx4Q07424 Gm24958-201ENSMUST00000158009 97 ntBASIC2.23□□□□□ -2.05
Cdx4Q07424 Gm26214-201ENSMUST00000158581 107 ntBASIC2.23□□□□□ -2.05
Cdx4Q07424 Gm25444-201ENSMUST00000158999 113 ntBASIC2.23□□□□□ -2.05
Cdx4Q07424 Mir3965-201ENSMUST00000175570 69 ntBASIC2.23□□□□□ -2.05
Cdx4Q07424 Mir5123-201ENSMUST00000177794 83 ntBASIC2.23□□□□□ -2.05
Cdx4Q07424 Mir7050-201ENSMUST00000184636 60 ntBASIC2.23□□□□□ -2.05
Cdx4Q07424 Gm28358-202ENSMUST00000189292 223 ntBASIC2.23□□□□□ -2.05
Cdx4Q07424 Gm37918-201ENSMUST00000192071 120 ntBASIC2.23□□□□□ -2.05
Cdx4Q07424 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.23□□□□□ -2.05
Cdx4Q07424 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.23□□□□□ -2.05
Cdx4Q07424 mt-Tt-201ENSMUST00000082422 67 ntBASIC2.23□□□□□ -2.05
Cdx4Q07424 Gm25797-201ENSMUST00000082640 107 ntBASIC2.23□□□□□ -2.05
Cdx4Q07424 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Cdx4Q07424 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.23□□□□□ -2.05
Cdx4Q07424 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Cdx4Q07424 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
Cdx4Q07424 Gm15214-201ENSMUST00000122155 470 ntBASIC2.22□□□□□ -2.05
Cdx4Q07424 Gm23559-201ENSMUST00000157824 103 ntBASIC2.22□□□□□ -2.05
Cdx4Q07424 Gm22665-201ENSMUST00000158720 275 ntBASIC2.22□□□□□ -2.05
Cdx4Q07424 Gm26160-201ENSMUST00000158965 63 ntBASIC2.22□□□□□ -2.05
Cdx4Q07424 Gm16111-201ENSMUST00000162128 285 ntBASIC2.22□□□□□ -2.05
Cdx4Q07424 Gm22853-201ENSMUST00000174974 131 ntBASIC2.22□□□□□ -2.05
Cdx4Q07424 Gm27527-201ENSMUST00000183903 99 ntBASIC2.22□□□□□ -2.05
Cdx4Q07424 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.22□□□□□ -2.05
Cdx4Q07424 Gm23445-201ENSMUST00000082800 107 ntBASIC2.22□□□□□ -2.05
Cdx4Q07424 Mir466-201ENSMUST00000093591 73 ntBASIC2.22□□□□□ -2.05
Cdx4Q07424 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.22□□□□□ -2.05
Cdx4Q07424 Gm43877-201ENSMUST00000205029 2238 ntBASIC2.21□□□□□ -2.06
Cdx4Q07424 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Cdx4Q07424 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Cdx4Q07424 Gm14536-201ENSMUST00000118324 138 ntBASIC2.21□□□□□ -2.06
Cdx4Q07424 Gm15027-201ENSMUST00000120922 138 ntBASIC2.21□□□□□ -2.06
Cdx4Q07424 Gm14491-201ENSMUST00000121919 199 ntBASIC2.21□□□□□ -2.06
Cdx4Q07424 Gm22281-201ENSMUST00000157198 103 ntBASIC2.21□□□□□ -2.06
Cdx4Q07424 Gm22850-201ENSMUST00000157714 82 ntBASIC2.21□□□□□ -2.06
Cdx4Q07424 Gm23080-201ENSMUST00000157846 103 ntBASIC2.21□□□□□ -2.06
Cdx4Q07424 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC2.21□□□□□ -2.06
Cdx4Q07424 Mir7667-201ENSMUST00000183866 63 ntBASIC2.21□□□□□ -2.06
Cdx4Q07424 Gm29604-201ENSMUST00000187176 163 ntBASIC2.21□□□□□ -2.06
Cdx4Q07424 Gm15235-201ENSMUST00000200572 194 ntBASIC2.21□□□□□ -2.06
Cdx4Q07424 Gm42739-201ENSMUST00000200687 226 ntBASIC2.21□□□□□ -2.06
Cdx4Q07424 Gm4945-201ENSMUST00000075152 453 ntBASIC2.21□□□□□ -2.06
Cdx4Q07424 Gm25684-201ENSMUST00000083941 107 ntBASIC2.21□□□□□ -2.06
Cdx4Q07424 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.21□□□□□ -2.06
Cdx4Q07424 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Cdx4Q07424 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Cdx4Q07424 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Cdx4Q07424 Gm22105-201ENSMUST00000116734 116 ntBASIC2.2□□□□□ -2.06
Cdx4Q07424 Gm16171-201ENSMUST00000118004 324 ntBASIC2.2□□□□□ -2.06
Cdx4Q07424 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.2□□□□□ -2.06
Cdx4Q07424 Gm25625-201ENSMUST00000157221 96 ntBASIC2.2□□□□□ -2.06
Cdx4Q07424 Gm23588-201ENSMUST00000157659 99 ntBASIC2.2□□□□□ -2.06
Cdx4Q07424 Gm24846-201ENSMUST00000158033 108 ntBASIC2.2□□□□□ -2.06
Cdx4Q07424 Gm22612-201ENSMUST00000158293 101 ntBASIC2.2□□□□□ -2.06
Cdx4Q07424 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.2□□□□□ -2.06
Cdx4Q07424 Gm28409-201ENSMUST00000187064 103 ntBASIC2.2□□□□□ -2.06
Cdx4Q07424 Gm37037-201ENSMUST00000194475 424 ntBASIC2.2□□□□□ -2.06
Cdx4Q07424 Gm24350-202ENSMUST00000198309 132 ntBASIC2.2□□□□□ -2.06
Cdx4Q07424 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.2□□□□□ -2.06
Cdx4Q07424 Gm30534-201ENSMUST00000217928 207 ntBASIC2.2□□□□□ -2.06
Cdx4Q07424 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.2□□□□□ -2.06
Cdx4Q07424 AC159885.1-201ENSMUST00000222221 199 ntBASIC2.2□□□□□ -2.06
Cdx4Q07424 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.2□□□□□ -2.06
Cdx4Q07424 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.2□□□□□ -2.06
Cdx4Q07424 Mir184-201ENSMUST00000083662 69 ntBASIC2.2□□□□□ -2.06
Cdx4Q07424 Gm23847-201ENSMUST00000083829 110 ntBASIC2.2□□□□□ -2.06
Cdx4Q07424 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.2□□□□□ -2.06
Cdx4Q07424 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.2□□□□□ -2.06
Cdx4Q07424 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.2□□□□□ -2.06
Cdx4Q07424 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms