Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm23671-201ENSMUST00000157472 103 ntBASIC2.67□□□□□ -1.98
Col8a1Q00780 Gm22187-201ENSMUST00000157819 129 ntBASIC2.67□□□□□ -1.98
Col8a1Q00780 Gm24747-201ENSMUST00000157835 87 ntBASIC2.67□□□□□ -1.98
Col8a1Q00780 Gm23895-201ENSMUST00000158108 160 ntBASIC2.67□□□□□ -1.98
Col8a1Q00780 Gm37281-201ENSMUST00000192412 439 ntBASIC2.67□□□□□ -1.98
Col8a1Q00780 Gm42739-201ENSMUST00000200687 226 ntBASIC2.67□□□□□ -1.98
Col8a1Q00780 Gm22251-201ENSMUST00000083216 107 ntBASIC2.67□□□□□ -1.98
Col8a1Q00780 Gm23038-201ENSMUST00000083873 104 ntBASIC2.67□□□□□ -1.98
Col8a1Q00780 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Col8a1Q00780 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
Col8a1Q00780 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
Col8a1Q00780 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Col8a1Q00780 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
Col8a1Q00780 Gm14947-201ENSMUST00000133704 303 ntBASIC2.66□□□□□ -1.98
Col8a1Q00780 Gm22558-201ENSMUST00000157326 95 ntBASIC2.66□□□□□ -1.98
Col8a1Q00780 Gm22666-201ENSMUST00000158717 164 ntBASIC2.66□□□□□ -1.98
Col8a1Q00780 Gm23194-201ENSMUST00000158813 105 ntBASIC2.66□□□□□ -1.98
Col8a1Q00780 Gm26297-201ENSMUST00000179464 132 ntBASIC2.66□□□□□ -1.98
Col8a1Q00780 Gm18486-201ENSMUST00000184040 298 ntBASIC2.66□□□□□ -1.98
Col8a1Q00780 Gm27668-201ENSMUST00000184188 120 ntBASIC2.66□□□□□ -1.98
Col8a1Q00780 Gm18665-201ENSMUST00000189783 270 ntBASIC2.66□□□□□ -1.98
Col8a1Q00780 Gm38364-201ENSMUST00000191814 179 ntBASIC2.66□□□□□ -1.98
Col8a1Q00780 AC147101.2-201ENSMUST00000219756 184 ntBASIC2.66□□□□□ -1.98
Col8a1Q00780 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Col8a1Q00780 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.66□□□□□ -1.98
Col8a1Q00780 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.66□□□□□ -1.98
Col8a1Q00780 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Col8a1Q00780 Gm43256-201ENSMUST00000199995 3091 ntBASIC2.66□□□□□ -1.98
Col8a1Q00780 Gm44715-201ENSMUST00000209049 3839 ntBASIC2.66□□□□□ -1.98
Col8a1Q00780 Gm14387-201ENSMUST00000121827 2055 ntBASIC2.65□□□□□ -1.98
Col8a1Q00780 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Col8a1Q00780 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Col8a1Q00780 Gm15214-201ENSMUST00000122155 470 ntBASIC2.65□□□□□ -1.99
Col8a1Q00780 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.65□□□□□ -1.99
Col8a1Q00780 Gm24846-201ENSMUST00000158033 108 ntBASIC2.65□□□□□ -1.99
Col8a1Q00780 Gm22516-201ENSMUST00000158266 124 ntBASIC2.65□□□□□ -1.99
Col8a1Q00780 Mir3076-201ENSMUST00000175415 60 ntBASIC2.65□□□□□ -1.99
Col8a1Q00780 Gm22069-201ENSMUST00000179911 107 ntBASIC2.65□□□□□ -1.99
Col8a1Q00780 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.65□□□□□ -1.99
Col8a1Q00780 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.65□□□□□ -1.99
Col8a1Q00780 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.65□□□□□ -1.99
Col8a1Q00780 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
Col8a1Q00780 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.65□□□□□ -1.99
Col8a1Q00780 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Col8a1Q00780 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Col8a1Q00780 Gm15697-201ENSMUST00000121946 2902 ntBASIC2.65□□□□□ -1.99
Col8a1Q00780 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
Col8a1Q00780 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC2.64□□□□□ -1.99
Col8a1Q00780 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Col8a1Q00780 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Col8a1Q00780 Gm18337-201ENSMUST00000219023 5762 ntBASIC2.64□□□□□ -1.99
Col8a1Q00780 Gm25485-201ENSMUST00000104120 132 ntBASIC2.64□□□□□ -1.99
Col8a1Q00780 Gm8260-201ENSMUST00000119230 353 ntBASIC2.64□□□□□ -1.99
Col8a1Q00780 Gm15365-201ENSMUST00000122392 300 ntBASIC2.64□□□□□ -1.99
Col8a1Q00780 Gm25882-201ENSMUST00000157784 85 ntBASIC2.64□□□□□ -1.99
Col8a1Q00780 Gm22099-201ENSMUST00000157925 123 ntBASIC2.64□□□□□ -1.99
Col8a1Q00780 Gm24842-201ENSMUST00000158681 54 ntBASIC2.64□□□□□ -1.99
Col8a1Q00780 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.64□□□□□ -1.99
Col8a1Q00780 Gm44976-201ENSMUST00000205543 261 ntBASIC2.64□□□□□ -1.99
Col8a1Q00780 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.64□□□□□ -1.99
Col8a1Q00780 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
Col8a1Q00780 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Col8a1Q00780 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Col8a1Q00780 Gm6325-201ENSMUST00000122015 3114 ntBASIC2.64□□□□□ -1.99
Col8a1Q00780 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Col8a1Q00780 AC160984.1-201ENSMUST00000225855 3154 ntBASIC2.63□□□□□ -1.99
Col8a1Q00780 Gm13913-201ENSMUST00000121126 260 ntBASIC2.63□□□□□ -1.99
Col8a1Q00780 Gm26091-201ENSMUST00000122704 82 ntBASIC2.63□□□□□ -1.99
Col8a1Q00780 Gm25625-201ENSMUST00000157221 96 ntBASIC2.63□□□□□ -1.99
Col8a1Q00780 Mir7667-201ENSMUST00000183866 63 ntBASIC2.63□□□□□ -1.99
Col8a1Q00780 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC2.63□□□□□ -1.99
Col8a1Q00780 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.63□□□□□ -1.99
Col8a1Q00780 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Col8a1Q00780 Gm45130-201ENSMUST00000207574 3388 ntBASIC2.63□□□□□ -1.99
Col8a1Q00780 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Col8a1Q00780 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Col8a1Q00780 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Col8a1Q00780 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Col8a1Q00780 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
Col8a1Q00780 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC2.62□□□□□ -1.99
Col8a1Q00780 Gm22782-201ENSMUST00000104082 132 ntBASIC2.62□□□□□ -1.99
Col8a1Q00780 Gm26051-201ENSMUST00000104642 93 ntBASIC2.62□□□□□ -1.99
Col8a1Q00780 Gm26247-201ENSMUST00000116702 91 ntBASIC2.62□□□□□ -1.99
Col8a1Q00780 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.62□□□□□ -1.99
Col8a1Q00780 Gm22141-201ENSMUST00000157403 277 ntBASIC2.62□□□□□ -1.99
Col8a1Q00780 Gm22946-201ENSMUST00000158558 82 ntBASIC2.62□□□□□ -1.99
Col8a1Q00780 Gm20438-201ENSMUST00000174441 329 ntBASIC2.62□□□□□ -1.99
Col8a1Q00780 Gm25642-201ENSMUST00000175137 66 ntBASIC2.62□□□□□ -1.99
Col8a1Q00780 Gm42719-201ENSMUST00000197393 355 ntBASIC2.62□□□□□ -1.99
Col8a1Q00780 Gm43381-201ENSMUST00000198553 165 ntBASIC2.62□□□□□ -1.99
Col8a1Q00780 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.62□□□□□ -1.99
Col8a1Q00780 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.62□□□□□ -1.99
Col8a1Q00780 AC155167.3-201ENSMUST00000226349 217 ntBASIC2.62□□□□□ -1.99
Col8a1Q00780 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.62□□□□□ -1.99
Col8a1Q00780 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
Col8a1Q00780 Gm25589-201ENSMUST00000082502 166 ntBASIC2.62□□□□□ -1.99
Col8a1Q00780 Gm25856-201ENSMUST00000082786 75 ntBASIC2.62□□□□□ -1.99
Col8a1Q00780 Gm26493-201ENSMUST00000083155 136 ntBASIC2.62□□□□□ -1.99
Col8a1Q00780 Gm23244-201ENSMUST00000083375 92 ntBASIC2.62□□□□□ -1.99
Col8a1Q00780 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms