Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Gm43993-201ENSMUST00000203972 247 ntBASIC0.82□□□□□ -2.28
Shox2P70390 AC116589.9-201ENSMUST00000221462 908 ntBASIC0.82□□□□□ -2.28
Shox2P70390 Snord68-201ENSMUST00000082516 86 ntBASIC0.82□□□□□ -2.28
Shox2P70390 Mir27b-201ENSMUST00000083541 73 ntBASIC0.82□□□□□ -2.28
Shox2P70390 Gm26314-201ENSMUST00000083891 107 ntBASIC0.82□□□□□ -2.28
Shox2P70390 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC0.82□□□□□ -2.28
Shox2P70390 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC0.81□□□□□ -2.28
Shox2P70390 Gm25378-201ENSMUST00000104333 129 ntBASIC0.81□□□□□ -2.28
Shox2P70390 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.81□□□□□ -2.28
Shox2P70390 Gm13475-201ENSMUST00000119290 234 ntBASIC0.81□□□□□ -2.28
Shox2P70390 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
Shox2P70390 Gm22088-201ENSMUST00000158341 117 ntBASIC0.81□□□□□ -2.28
Shox2P70390 Gm24315-201ENSMUST00000177835 127 ntBASIC0.81□□□□□ -2.28
Shox2P70390 Gm27587-201ENSMUST00000185116 163 ntBASIC0.81□□□□□ -2.28
Shox2P70390 Gm28344-201ENSMUST00000185704 279 ntBASIC0.81□□□□□ -2.28
Shox2P70390 Gm38323-201ENSMUST00000192450 210 ntBASIC0.81□□□□□ -2.28
Shox2P70390 Gm38113-201ENSMUST00000193704 201 ntBASIC0.81□□□□□ -2.28
Shox2P70390 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC0.81□□□□□ -2.28
Shox2P70390 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC0.81□□□□□ -2.28
Shox2P70390 AL772265.1-201ENSMUST00000214379 305 ntBASIC0.81□□□□□ -2.28
Shox2P70390 Gm18696-201ENSMUST00000220103 274 ntBASIC0.81□□□□□ -2.28
Shox2P70390 AC130821.1-201ENSMUST00000221997 293 ntBASIC0.81□□□□□ -2.28
Shox2P70390 AC163295.1-201ENSMUST00000227840 314 ntBASIC0.81□□□□□ -2.28
Shox2P70390 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
Shox2P70390 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
Shox2P70390 Gm11891-201ENSMUST00000121241 619 ntBASIC0.8□□□□□ -2.28
Shox2P70390 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.8□□□□□ -2.28
Shox2P70390 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.8□□□□□ -2.28
Shox2P70390 Gm26200-201ENSMUST00000180273 79 ntBASIC0.8□□□□□ -2.28
Shox2P70390 AC163033.1-201ENSMUST00000218608 157 ntBASIC0.8□□□□□ -2.28
Shox2P70390 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC0.8□□□□□ -2.28
Shox2P70390 Gm26224-201ENSMUST00000082506 80 ntBASIC0.8□□□□□ -2.28
Shox2P70390 Gm23735-201ENSMUST00000082551 134 ntBASIC0.8□□□□□ -2.28
Shox2P70390 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
Shox2P70390 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
Shox2P70390 Gm42755-201ENSMUST00000198533 1493 ntBASIC0.8□□□□□ -2.28
Shox2P70390 Gm14922-201ENSMUST00000121131 163 ntBASIC0.79□□□□□ -2.28
Shox2P70390 Gm11254-201ENSMUST00000122368 653 ntBASIC0.79□□□□□ -2.28
Shox2P70390 Gm24476-201ENSMUST00000157437 131 ntBASIC0.79□□□□□ -2.28
Shox2P70390 Mir5104-201ENSMUST00000175319 94 ntBASIC0.79□□□□□ -2.28
Shox2P70390 Gm22166-201ENSMUST00000178419 121 ntBASIC0.79□□□□□ -2.28
Shox2P70390 Gm23288-201ENSMUST00000179213 121 ntBASIC0.79□□□□□ -2.28
Shox2P70390 Gm27640-201ENSMUST00000184580 147 ntBASIC0.79□□□□□ -2.28
Shox2P70390 Gm18296-201ENSMUST00000192475 783 ntBASIC0.79□□□□□ -2.28
Shox2P70390 Gm5034-201ENSMUST00000199115 634 ntBASIC0.79□□□□□ -2.28
Shox2P70390 Gm20102-201ENSMUST00000222445 220 ntBASIC0.79□□□□□ -2.28
Shox2P70390 AC162934.3-201ENSMUST00000223015 841 ntBASIC0.79□□□□□ -2.28
Shox2P70390 Gm23299-201ENSMUST00000082708 79 ntBASIC0.79□□□□□ -2.28
Shox2P70390 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
Shox2P70390 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.79□□□□□ -2.28
Shox2P70390 Gm14803-201ENSMUST00000117163 361 ntBASIC0.78□□□□□ -2.28
Shox2P70390 Gm12255-201ENSMUST00000117184 284 ntBASIC0.78□□□□□ -2.28
Shox2P70390 Gm24005-201ENSMUST00000158459 296 ntBASIC0.78□□□□□ -2.28
Shox2P70390 Mir6389-201ENSMUST00000183661 102 ntBASIC0.78□□□□□ -2.28
Shox2P70390 Gm27420-201ENSMUST00000183823 79 ntBASIC0.78□□□□□ -2.28
Shox2P70390 Gm28257-201ENSMUST00000185244 463 ntBASIC0.78□□□□□ -2.28
Shox2P70390 Gm42623-201ENSMUST00000197225 379 ntBASIC0.78□□□□□ -2.28
Shox2P70390 Gm44282-201ENSMUST00000203199 190 ntBASIC0.78□□□□□ -2.28
Shox2P70390 AC120394.1-201ENSMUST00000217153 351 ntBASIC0.78□□□□□ -2.28
Shox2P70390 AC112972.1-201ENSMUST00000227329 365 ntBASIC0.78□□□□□ -2.28
Shox2P70390 Gm23731-201ENSMUST00000083749 107 ntBASIC0.78□□□□□ -2.28
Shox2P70390 Gm22544-201ENSMUST00000104349 127 ntBASIC0.77□□□□□ -2.29
Shox2P70390 Gm14039-201ENSMUST00000118705 101 ntBASIC0.77□□□□□ -2.29
Shox2P70390 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.77□□□□□ -2.29
Shox2P70390 Gm22477-201ENSMUST00000122569 316 ntBASIC0.77□□□□□ -2.29
Shox2P70390 Gm25663-201ENSMUST00000157698 135 ntBASIC0.77□□□□□ -2.29
Shox2P70390 Gm25163-201ENSMUST00000158905 104 ntBASIC0.77□□□□□ -2.29
Shox2P70390 Gm22403-201ENSMUST00000174919 84 ntBASIC0.77□□□□□ -2.29
Shox2P70390 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.77□□□□□ -2.29
Shox2P70390 Gm27793-201ENSMUST00000183405 76 ntBASIC0.77□□□□□ -2.29
Shox2P70390 Gm27313-201ENSMUST00000183500 142 ntBASIC0.77□□□□□ -2.29
Shox2P70390 Gm28862-201ENSMUST00000188246 163 ntBASIC0.77□□□□□ -2.29
Shox2P70390 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC0.77□□□□□ -2.29
Shox2P70390 Gm43602-201ENSMUST00000196772 300 ntBASIC0.77□□□□□ -2.29
Shox2P70390 Gm25079-201ENSMUST00000082529 203 ntBASIC0.77□□□□□ -2.29
Shox2P70390 Gm23448-201ENSMUST00000083151 104 ntBASIC0.77□□□□□ -2.29
Shox2P70390 Snord35a-201ENSMUST00000083884 90 ntBASIC0.77□□□□□ -2.29
Shox2P70390 Gm22935-201ENSMUST00000103960 104 ntBASIC0.76□□□□□ -2.29
Shox2P70390 Mir872-201ENSMUST00000104728 81 ntBASIC0.76□□□□□ -2.29
Shox2P70390 Gm13729-201ENSMUST00000120328 406 ntBASIC0.76□□□□□ -2.29
Shox2P70390 Gm14980-201ENSMUST00000121247 736 ntBASIC0.76□□□□□ -2.29
Shox2P70390 Gm11389-201ENSMUST00000121407 430 ntBASIC0.76□□□□□ -2.29
Shox2P70390 Gm22281-201ENSMUST00000157198 103 ntBASIC0.76□□□□□ -2.29
Shox2P70390 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.76□□□□□ -2.29
Shox2P70390 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC0.76□□□□□ -2.29
Shox2P70390 Gm36953-201ENSMUST00000195295 268 ntBASIC0.76□□□□□ -2.29
Shox2P70390 AC162387.1-201ENSMUST00000213369 213 ntBASIC0.76□□□□□ -2.29
Shox2P70390 AC100209.2-201ENSMUST00000224461 451 ntBASIC0.76□□□□□ -2.29
Shox2P70390 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
Shox2P70390 Gm24594-201ENSMUST00000122502 99 ntBASIC0.75□□□□□ -2.29
Shox2P70390 Gm24577-201ENSMUST00000158580 63 ntBASIC0.75□□□□□ -2.29
Shox2P70390 Gm24323-201ENSMUST00000175342 77 ntBASIC0.75□□□□□ -2.29
Shox2P70390 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC0.75□□□□□ -2.29
Shox2P70390 Gm27817-201ENSMUST00000184302 233 ntBASIC0.75□□□□□ -2.29
Shox2P70390 Gm28506-201ENSMUST00000189937 150 ntBASIC0.75□□□□□ -2.29
Shox2P70390 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.75□□□□□ -2.29
Shox2P70390 AC173345.2-201ENSMUST00000222795 153 ntBASIC0.75□□□□□ -2.29
Shox2P70390 AC183092.1-201ENSMUST00000224301 153 ntBASIC0.75□□□□□ -2.29
Shox2P70390 AC098718.1-201ENSMUST00000226166 175 ntBASIC0.75□□□□□ -2.29
Shox2P70390 AC151833.1-201ENSMUST00000227752 574 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms