Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.19□□□□□ -2.22
Ufd1P70362 Mir3092-201ENSMUST00000174954 96 ntBASIC1.19□□□□□ -2.22
Ufd1P70362 Gm26914-201ENSMUST00000182262 223 ntBASIC1.19□□□□□ -2.22
Ufd1P70362 Mir7679-201ENSMUST00000183379 63 ntBASIC1.19□□□□□ -2.22
Ufd1P70362 Gm28409-201ENSMUST00000187064 103 ntBASIC1.19□□□□□ -2.22
Ufd1P70362 Gm45207-201ENSMUST00000207469 145 ntBASIC1.19□□□□□ -2.22
Ufd1P70362 Gm45543-201ENSMUST00000209327 88 ntBASIC1.19□□□□□ -2.22
Ufd1P70362 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.19□□□□□ -2.22
Ufd1P70362 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.19□□□□□ -2.22
Ufd1P70362 Gm25930-201ENSMUST00000082785 107 ntBASIC1.19□□□□□ -2.22
Ufd1P70362 Gm23412-201ENSMUST00000083017 107 ntBASIC1.19□□□□□ -2.22
Ufd1P70362 Mir155-201ENSMUST00000083463 65 ntBASIC1.19□□□□□ -2.22
Ufd1P70362 Gm25513-201ENSMUST00000083861 162 ntBASIC1.19□□□□□ -2.22
Ufd1P70362 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.19□□□□□ -2.22
Ufd1P70362 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Ufd1P70362 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Ufd1P70362 Gm6444-201ENSMUST00000119611 458 ntBASIC1.18□□□□□ -2.22
Ufd1P70362 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.18□□□□□ -2.22
Ufd1P70362 Gm25642-201ENSMUST00000175137 66 ntBASIC1.18□□□□□ -2.22
Ufd1P70362 Gm7958-201ENSMUST00000178255 468 ntBASIC1.18□□□□□ -2.22
Ufd1P70362 Gm25450-201ENSMUST00000179144 107 ntBASIC1.18□□□□□ -2.22
Ufd1P70362 Gm7950-201ENSMUST00000179633 468 ntBASIC1.18□□□□□ -2.22
Ufd1P70362 Gm37338-201ENSMUST00000191986 127 ntBASIC1.18□□□□□ -2.22
Ufd1P70362 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.18□□□□□ -2.22
Ufd1P70362 Gm24116-201ENSMUST00000103975 107 ntBASIC1.17□□□□□ -2.22
Ufd1P70362 Gm25759-201ENSMUST00000103988 129 ntBASIC1.17□□□□□ -2.22
Ufd1P70362 Mir466f-3-201ENSMUST00000104788 94 ntBASIC1.17□□□□□ -2.22
Ufd1P70362 Gm12647-201ENSMUST00000118977 265 ntBASIC1.17□□□□□ -2.22
Ufd1P70362 Gm14922-201ENSMUST00000121131 163 ntBASIC1.17□□□□□ -2.22
Ufd1P70362 Gm24630-201ENSMUST00000122768 106 ntBASIC1.17□□□□□ -2.22
Ufd1P70362 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC1.17□□□□□ -2.22
Ufd1P70362 Gm22279-201ENSMUST00000157200 93 ntBASIC1.17□□□□□ -2.22
Ufd1P70362 Gm23474-201ENSMUST00000158884 75 ntBASIC1.17□□□□□ -2.22
Ufd1P70362 Gm16584-201ENSMUST00000159267 189 ntBASIC1.17□□□□□ -2.22
Ufd1P70362 Gm22264-201ENSMUST00000178200 107 ntBASIC1.17□□□□□ -2.22
Ufd1P70362 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.17□□□□□ -2.22
Ufd1P70362 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.17□□□□□ -2.22
Ufd1P70362 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.17□□□□□ -2.22
Ufd1P70362 Mir544-201ENSMUST00000103813 78 ntBASIC1.16□□□□□ -2.22
Ufd1P70362 Gm12512-201ENSMUST00000119620 217 ntBASIC1.16□□□□□ -2.22
Ufd1P70362 Gm26255-201ENSMUST00000122492 103 ntBASIC1.16□□□□□ -2.22
Ufd1P70362 Traj60-201ENSMUST00000167781 54 ntBASIC1.16□□□□□ -2.22
Ufd1P70362 Gm22114-201ENSMUST00000177756 107 ntBASIC1.16□□□□□ -2.22
Ufd1P70362 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC1.16□□□□□ -2.22
Ufd1P70362 Gm44063-201ENSMUST00000203307 376 ntBASIC1.16□□□□□ -2.22
Ufd1P70362 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.16□□□□□ -2.22
Ufd1P70362 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.16□□□□□ -2.22
Ufd1P70362 Gm23055-201ENSMUST00000082805 94 ntBASIC1.16□□□□□ -2.22
Ufd1P70362 Gm24038-201ENSMUST00000082872 159 ntBASIC1.16□□□□□ -2.22
Ufd1P70362 Gm25038-201ENSMUST00000082928 130 ntBASIC1.16□□□□□ -2.22
Ufd1P70362 Mir148b-201ENSMUST00000083626 97 ntBASIC1.16□□□□□ -2.22
Ufd1P70362 Gm26107-201ENSMUST00000083972 107 ntBASIC1.16□□□□□ -2.22
Ufd1P70362 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.16□□□□□ -2.22
Ufd1P70362 Gm24865-201ENSMUST00000103246 96 ntBASIC1.15□□□□□ -2.23
Ufd1P70362 Gm24283-201ENSMUST00000104233 107 ntBASIC1.15□□□□□ -2.23
Ufd1P70362 Gm22032-201ENSMUST00000116946 116 ntBASIC1.15□□□□□ -2.23
Ufd1P70362 Gm11857-201ENSMUST00000119817 324 ntBASIC1.15□□□□□ -2.23
Ufd1P70362 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC1.15□□□□□ -2.23
Ufd1P70362 Gm23759-201ENSMUST00000158351 268 ntBASIC1.15□□□□□ -2.23
Ufd1P70362 Gm2962-201ENSMUST00000159266 336 ntBASIC1.15□□□□□ -2.23
Ufd1P70362 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Ufd1P70362 Mir6352-201ENSMUST00000184495 116 ntBASIC1.15□□□□□ -2.23
Ufd1P70362 Trbv7-201ENSMUST00000193339 402 ntBASIC1.15□□□□□ -2.23
Ufd1P70362 Mir376a-201ENSMUST00000197584 68 ntBASIC1.15□□□□□ -2.23
Ufd1P70362 Gm44419-201ENSMUST00000203338 229 ntBASIC1.15□□□□□ -2.23
Ufd1P70362 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC1.15□□□□□ -2.23
Ufd1P70362 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1.15□□□□□ -2.23
Ufd1P70362 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.15□□□□□ -2.23
Ufd1P70362 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.15□□□□□ -2.23
Ufd1P70362 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.15□□□□□ -2.23
Ufd1P70362 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
Ufd1P70362 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.14□□□□□ -2.23
Ufd1P70362 Gm26135-201ENSMUST00000101993 72 ntBASIC1.14□□□□□ -2.23
Ufd1P70362 Gm25495-201ENSMUST00000104431 131 ntBASIC1.14□□□□□ -2.23
Ufd1P70362 Gm26342-201ENSMUST00000104557 129 ntBASIC1.14□□□□□ -2.23
Ufd1P70362 Gm15214-201ENSMUST00000122155 470 ntBASIC1.14□□□□□ -2.23
Ufd1P70362 Mir1904-201ENSMUST00000122702 80 ntBASIC1.14□□□□□ -2.23
Ufd1P70362 Gm22080-201ENSMUST00000157591 106 ntBASIC1.14□□□□□ -2.23
Ufd1P70362 Gm25884-201ENSMUST00000157782 62 ntBASIC1.14□□□□□ -2.23
Ufd1P70362 Gm26363-201ENSMUST00000158866 83 ntBASIC1.14□□□□□ -2.23
Ufd1P70362 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Ufd1P70362 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC1.14□□□□□ -2.23
Ufd1P70362 Snord50b-201ENSMUST00000178497 72 ntBASIC1.14□□□□□ -2.23
Ufd1P70362 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
Ufd1P70362 Gm18433-201ENSMUST00000192747 197 ntBASIC1.14□□□□□ -2.23
Ufd1P70362 Gm42719-201ENSMUST00000197393 355 ntBASIC1.14□□□□□ -2.23
Ufd1P70362 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.14□□□□□ -2.23
Ufd1P70362 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.14□□□□□ -2.23
Ufd1P70362 Mir322-201ENSMUST00000083484 95 ntBASIC1.14□□□□□ -2.23
Ufd1P70362 Gm24261-201ENSMUST00000083744 104 ntBASIC1.14□□□□□ -2.23
Ufd1P70362 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Ufd1P70362 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.13□□□□□ -2.23
Ufd1P70362 Gm23907-201ENSMUST00000104595 189 ntBASIC1.13□□□□□ -2.23
Ufd1P70362 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.13□□□□□ -2.23
Ufd1P70362 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.13□□□□□ -2.23
Ufd1P70362 Gm22164-201ENSMUST00000158413 106 ntBASIC1.13□□□□□ -2.23
Ufd1P70362 Gm22944-201ENSMUST00000158662 133 ntBASIC1.13□□□□□ -2.23
Ufd1P70362 Gm26159-201ENSMUST00000158968 104 ntBASIC1.13□□□□□ -2.23
Ufd1P70362 Mir6997-201ENSMUST00000184313 71 ntBASIC1.13□□□□□ -2.23
Ufd1P70362 Gm42774-201ENSMUST00000198854 283 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 130.2 ms