Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Mir466n-201ENSMUST00000104798 94 ntBASIC0.07□□□□□ -2.4
Cux1P53564 Gm11859-201ENSMUST00000118099 455 ntBASIC0.07□□□□□ -2.4
Cux1P53564 Gm12837-201ENSMUST00000120131 373 ntBASIC0.07□□□□□ -2.4
Cux1P53564 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
Cux1P53564 Mir3108-201ENSMUST00000175500 79 ntBASIC0.07□□□□□ -2.4
Cux1P53564 Gm24897-201ENSMUST00000179033 107 ntBASIC0.07□□□□□ -2.4
Cux1P53564 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.07□□□□□ -2.4
Cux1P53564 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.07□□□□□ -2.4
Cux1P53564 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.07□□□□□ -2.4
Cux1P53564 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.07□□□□□ -2.4
Cux1P53564 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.07□□□□□ -2.4
Cux1P53564 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.07□□□□□ -2.4
Cux1P53564 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.07□□□□□ -2.4
Cux1P53564 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.07□□□□□ -2.4
Cux1P53564 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.07□□□□□ -2.4
Cux1P53564 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.07□□□□□ -2.4
Cux1P53564 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.07□□□□□ -2.4
Cux1P53564 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.07□□□□□ -2.4
Cux1P53564 Gm22508-201ENSMUST00000082772 110 ntBASIC0.07□□□□□ -2.4
Cux1P53564 Gm25563-201ENSMUST00000104603 74 ntBASIC0.06□□□□□ -2.4
Cux1P53564 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC0.06□□□□□ -2.4
Cux1P53564 Gm38208-201ENSMUST00000192476 114 ntBASIC0.06□□□□□ -2.4
Cux1P53564 Gm42805-201ENSMUST00000196158 276 ntBASIC0.06□□□□□ -2.4
Cux1P53564 Mir703-201ENSMUST00000197105 109 ntBASIC0.06□□□□□ -2.4
Cux1P53564 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.06□□□□□ -2.4
Cux1P53564 Gm44137-201ENSMUST00000203670 367 ntBASIC0.06□□□□□ -2.4
Cux1P53564 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC0.06□□□□□ -2.4
Cux1P53564 AC162931.1-201ENSMUST00000214184 267 ntBASIC0.06□□□□□ -2.4
Cux1P53564 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.06□□□□□ -2.4
Cux1P53564 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
Cux1P53564 Gm25802-201ENSMUST00000082639 77 ntBASIC0.06□□□□□ -2.4
Cux1P53564 Gm14946-201ENSMUST00000119859 296 ntBASIC0.05□□□□□ -2.4
Cux1P53564 Gm22942-201ENSMUST00000158563 124 ntBASIC0.05□□□□□ -2.4
Cux1P53564 Gm25643-201ENSMUST00000158874 103 ntBASIC0.05□□□□□ -2.4
Cux1P53564 Gm24084-201ENSMUST00000175173 137 ntBASIC0.05□□□□□ -2.4
Cux1P53564 Gm43114-201ENSMUST00000198298 343 ntBASIC0.05□□□□□ -2.4
Cux1P53564 Gm45541-201ENSMUST00000210443 54 ntBASIC0.05□□□□□ -2.4
Cux1P53564 Gm22884-201ENSMUST00000083127 140 ntBASIC0.05□□□□□ -2.4
Cux1P53564 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC0.05□□□□□ -2.4
Cux1P53564 Gm15102-201ENSMUST00000118740 1502 ntBASIC0.04□□□□□ -2.4
Cux1P53564 Gm15101-201ENSMUST00000178818 1502 ntBASIC0.04□□□□□ -2.4
Cux1P53564 Gm14638-201ENSMUST00000121338 216 ntBASIC0.04□□□□□ -2.4
Cux1P53564 Gm24754-201ENSMUST00000177997 107 ntBASIC0.04□□□□□ -2.4
Cux1P53564 Gm24862-201ENSMUST00000179103 79 ntBASIC0.04□□□□□ -2.4
Cux1P53564 Gm23310-201ENSMUST00000179105 79 ntBASIC0.04□□□□□ -2.4
Cux1P53564 Gm25461-201ENSMUST00000179293 79 ntBASIC0.04□□□□□ -2.4
Cux1P53564 Gm44337-201ENSMUST00000196553 114 ntBASIC0.04□□□□□ -2.4
Cux1P53564 Gm45815-201ENSMUST00000220241 146 ntBASIC0.04□□□□□ -2.4
Cux1P53564 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC0.04□□□□□ -2.4
Cux1P53564 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.04□□□□□ -2.4
Cux1P53564 Gm22545-201ENSMUST00000104350 132 ntBASIC0.03□□□□□ -2.4
Cux1P53564 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
Cux1P53564 Gm21894-201ENSMUST00000179631 546 ntBASIC0.03□□□□□ -2.4
Cux1P53564 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC0.03□□□□□ -2.4
Cux1P53564 Gm20923-201ENSMUST00000190009 319 ntBASIC0.03□□□□□ -2.4
Cux1P53564 Gm21088-201ENSMUST00000190875 316 ntBASIC0.03□□□□□ -2.4
Cux1P53564 Gm26265-202ENSMUST00000196326 133 ntBASIC0.03□□□□□ -2.4
Cux1P53564 Gm35212-201ENSMUST00000196672 606 ntBASIC0.03□□□□□ -2.4
Cux1P53564 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.03□□□□□ -2.4
Cux1P53564 AC163033.1-201ENSMUST00000218608 157 ntBASIC0.03□□□□□ -2.4
Cux1P53564 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.03□□□□□ -2.4
Cux1P53564 CT485612.2-201ENSMUST00000223014 151 ntBASIC0.03□□□□□ -2.4
Cux1P53564 Gm14765-201ENSMUST00000121954 326 ntBASIC0.03□□□□□ -2.41
Cux1P53564 Gm25968-201ENSMUST00000157167 100 ntBASIC0.03□□□□□ -2.41
Cux1P53564 Gm22597-201ENSMUST00000157602 80 ntBASIC0.03□□□□□ -2.41
Cux1P53564 Gm22654-201ENSMUST00000157874 105 ntBASIC0.03□□□□□ -2.41
Cux1P53564 Gm23542-201ENSMUST00000158208 96 ntBASIC0.03□□□□□ -2.41
Cux1P53564 Gm20689-201ENSMUST00000176033 279 ntBASIC0.03□□□□□ -2.41
Cux1P53564 Gm38231-201ENSMUST00000192030 347 ntBASIC0.03□□□□□ -2.41
Cux1P53564 Gm14931-201ENSMUST00000111079 253 ntBASIC0.02□□□□□ -2.41
Cux1P53564 Gm22279-201ENSMUST00000157200 93 ntBASIC0.02□□□□□ -2.41
Cux1P53564 Gm23535-201ENSMUST00000157542 106 ntBASIC0.02□□□□□ -2.41
Cux1P53564 Gm25451-201ENSMUST00000177832 121 ntBASIC0.02□□□□□ -2.41
Cux1P53564 Gm22584-201ENSMUST00000177935 92 ntBASIC0.02□□□□□ -2.41
Cux1P53564 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC0.02□□□□□ -2.41
Cux1P53564 Gm22809-201ENSMUST00000082743 156 ntBASIC0.02□□□□□ -2.41
Cux1P53564 Gm12433-201ENSMUST00000119659 255 ntBASIC0.01□□□□□ -2.41
Cux1P53564 Gm23000-201ENSMUST00000157083 139 ntBASIC0.01□□□□□ -2.41
Cux1P53564 Gm25952-201ENSMUST00000175329 74 ntBASIC0.01□□□□□ -2.41
Cux1P53564 Gm27365-201ENSMUST00000184041 177 ntBASIC0.01□□□□□ -2.41
Cux1P53564 Gm28921-201ENSMUST00000190219 378 ntBASIC0.01□□□□□ -2.41
Cux1P53564 Gm44488-201ENSMUST00000199467 119 ntBASIC0.01□□□□□ -2.41
Cux1P53564 Gm44282-201ENSMUST00000203199 190 ntBASIC0.01□□□□□ -2.41
Cux1P53564 AC122905.2-201ENSMUST00000220325 269 ntBASIC0.01□□□□□ -2.41
Cux1P53564 Gm25703-201ENSMUST00000083123 151 ntBASIC0.01□□□□□ -2.41
Cux1P53564 Gm25784-201ENSMUST00000122524 81 ntBASIC0□□□□□ -2.41
Cux1P53564 Gm25805-201ENSMUST00000122788 108 ntBASIC0□□□□□ -2.41
Cux1P53564 Gm24726-201ENSMUST00000158232 121 ntBASIC0□□□□□ -2.41
Cux1P53564 Mir1936-201ENSMUST00000158699 93 ntBASIC0□□□□□ -2.41
Cux1P53564 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC0□□□□□ -2.41
Cux1P53564 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC0□□□□□ -2.41
Cux1P53564 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC0□□□□□ -2.41
Cux1P53564 Mir468-201ENSMUST00000197332 78 ntBASIC0□□□□□ -2.41
Cux1P53564 Gm43993-201ENSMUST00000203972 247 ntBASIC0□□□□□ -2.41
Cux1P53564 Gm30155-201ENSMUST00000223458 339 ntBASIC0□□□□□ -2.41
Cux1P53564 Gm26002-201ENSMUST00000101915 107 ntBASIC-0.01□□□□□ -2.41
Cux1P53564 Gm25611-201ENSMUST00000104017 133 ntBASIC-0.01□□□□□ -2.41
Cux1P53564 Gm13475-201ENSMUST00000119290 234 ntBASIC-0.01□□□□□ -2.41
Cux1P53564 Gm22236-201ENSMUST00000157093 106 ntBASIC-0.01□□□□□ -2.41
Cux1P53564 Gm23034-201ENSMUST00000158001 147 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms