Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm26403-201ENSMUST00000158500 105 ntBASIC2.73□□□□□ -1.97
Shmt1P50431 Gm26022-201ENSMUST00000158663 108 ntBASIC2.73□□□□□ -1.97
Shmt1P50431 Gm23182-201ENSMUST00000158688 135 ntBASIC2.73□□□□□ -1.97
Shmt1P50431 Gm16546-201ENSMUST00000159442 355 ntBASIC2.73□□□□□ -1.97
Shmt1P50431 Gm25707-201ENSMUST00000175120 96 ntBASIC2.73□□□□□ -1.97
Shmt1P50431 Gm22800-201ENSMUST00000175627 94 ntBASIC2.73□□□□□ -1.97
Shmt1P50431 Mir6405-201ENSMUST00000184584 124 ntBASIC2.73□□□□□ -1.97
Shmt1P50431 Gm28900-201ENSMUST00000185232 156 ntBASIC2.73□□□□□ -1.97
Shmt1P50431 Gm43676-201ENSMUST00000197532 540 ntBASIC2.73□□□□□ -1.97
Shmt1P50431 AC159885.1-201ENSMUST00000222221 199 ntBASIC2.73□□□□□ -1.97
Shmt1P50431 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
Shmt1P50431 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Shmt1P50431 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
Shmt1P50431 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.72□□□□□ -1.97
Shmt1P50431 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Shmt1P50431 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.72□□□□□ -1.97
Shmt1P50431 Gm16533-201ENSMUST00000140035 228 ntBASIC2.72□□□□□ -1.97
Shmt1P50431 Gm25267-201ENSMUST00000158522 63 ntBASIC2.72□□□□□ -1.97
Shmt1P50431 Gm22858-201ENSMUST00000174972 76 ntBASIC2.72□□□□□ -1.97
Shmt1P50431 Gm22853-201ENSMUST00000174974 131 ntBASIC2.72□□□□□ -1.97
Shmt1P50431 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Shmt1P50431 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.72□□□□□ -1.97
Shmt1P50431 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.72□□□□□ -1.97
Shmt1P50431 Gm6030-201ENSMUST00000078768 402 ntBASIC2.72□□□□□ -1.97
Shmt1P50431 Gm22622-201ENSMUST00000082870 129 ntBASIC2.72□□□□□ -1.97
Shmt1P50431 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.72□□□□□ -1.97
Shmt1P50431 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Shmt1P50431 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.97
Shmt1P50431 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.97
Shmt1P50431 Gm22148-201ENSMUST00000104445 107 ntBASIC2.71□□□□□ -1.98
Shmt1P50431 Mir878-201ENSMUST00000104680 78 ntBASIC2.71□□□□□ -1.98
Shmt1P50431 Gm23651-201ENSMUST00000116755 120 ntBASIC2.71□□□□□ -1.98
Shmt1P50431 Gm24274-201ENSMUST00000116787 124 ntBASIC2.71□□□□□ -1.98
Shmt1P50431 Gm22193-201ENSMUST00000116868 76 ntBASIC2.71□□□□□ -1.98
Shmt1P50431 Gm14491-201ENSMUST00000121919 199 ntBASIC2.71□□□□□ -1.98
Shmt1P50431 Gm22557-201ENSMUST00000157804 102 ntBASIC2.71□□□□□ -1.98
Shmt1P50431 Mir1951-201ENSMUST00000157981 89 ntBASIC2.71□□□□□ -1.98
Shmt1P50431 Gm24075-201ENSMUST00000158175 72 ntBASIC2.71□□□□□ -1.98
Shmt1P50431 Gm19257-201ENSMUST00000186121 183 ntBASIC2.71□□□□□ -1.98
Shmt1P50431 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.71□□□□□ -1.98
Shmt1P50431 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.71□□□□□ -1.98
Shmt1P50431 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.71□□□□□ -1.98
Shmt1P50431 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.71□□□□□ -1.98
Shmt1P50431 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.71□□□□□ -1.98
Shmt1P50431 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Shmt1P50431 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.7□□□□□ -1.98
Shmt1P50431 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.7□□□□□ -1.98
Shmt1P50431 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Shmt1P50431 Gm23470-201ENSMUST00000157129 120 ntBASIC2.7□□□□□ -1.98
Shmt1P50431 Gm22483-201ENSMUST00000157986 274 ntBASIC2.7□□□□□ -1.98
Shmt1P50431 Gm24054-201ENSMUST00000158619 105 ntBASIC2.7□□□□□ -1.98
Shmt1P50431 Gm22139-201ENSMUST00000158747 105 ntBASIC2.7□□□□□ -1.98
Shmt1P50431 Gm42988-201ENSMUST00000198116 225 ntBASIC2.7□□□□□ -1.98
Shmt1P50431 Gm44459-201ENSMUST00000203926 160 ntBASIC2.7□□□□□ -1.98
Shmt1P50431 Gm5010-201ENSMUST00000213131 260 ntBASIC2.7□□□□□ -1.98
Shmt1P50431 Gm18502-201ENSMUST00000218679 199 ntBASIC2.7□□□□□ -1.98
Shmt1P50431 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.7□□□□□ -1.98
Shmt1P50431 Gm26265-201ENSMUST00000083277 135 ntBASIC2.7□□□□□ -1.98
Shmt1P50431 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Shmt1P50431 Gm10351-201ENSMUST00000087694 125 ntBASIC2.7□□□□□ -1.98
Shmt1P50431 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.69□□□□□ -1.98
Shmt1P50431 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Shmt1P50431 Mir466b-3-201ENSMUST00000103806 81 ntBASIC2.69□□□□□ -1.98
Shmt1P50431 Gm22270-201ENSMUST00000104034 132 ntBASIC2.69□□□□□ -1.98
Shmt1P50431 Gm25529-201ENSMUST00000104850 92 ntBASIC2.69□□□□□ -1.98
Shmt1P50431 Mir1298-201ENSMUST00000116681 98 ntBASIC2.69□□□□□ -1.98
Shmt1P50431 Gm13922-201ENSMUST00000119505 156 ntBASIC2.69□□□□□ -1.98
Shmt1P50431 Gm23230-201ENSMUST00000157298 133 ntBASIC2.69□□□□□ -1.98
Shmt1P50431 Gm24480-201ENSMUST00000157442 103 ntBASIC2.69□□□□□ -1.98
Shmt1P50431 Gm24358-201ENSMUST00000158424 288 ntBASIC2.69□□□□□ -1.98
Shmt1P50431 Gm29308-201ENSMUST00000188863 315 ntBASIC2.69□□□□□ -1.98
Shmt1P50431 Gm28537-201ENSMUST00000189026 315 ntBASIC2.69□□□□□ -1.98
Shmt1P50431 Gm29631-201ENSMUST00000191065 315 ntBASIC2.69□□□□□ -1.98
Shmt1P50431 Gm44338-201ENSMUST00000198614 110 ntBASIC2.69□□□□□ -1.98
Shmt1P50431 Gm43901-201ENSMUST00000203247 453 ntBASIC2.69□□□□□ -1.98
Shmt1P50431 Gm44564-201ENSMUST00000207985 180 ntBASIC2.69□□□□□ -1.98
Shmt1P50431 Gm18346-201ENSMUST00000216782 325 ntBASIC2.69□□□□□ -1.98
Shmt1P50431 AC164086.1-201ENSMUST00000221038 289 ntBASIC2.69□□□□□ -1.98
Shmt1P50431 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.69□□□□□ -1.98
Shmt1P50431 Gm23040-201ENSMUST00000083869 163 ntBASIC2.69□□□□□ -1.98
Shmt1P50431 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Shmt1P50431 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Shmt1P50431 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.69□□□□□ -1.98
Shmt1P50431 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Shmt1P50431 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Shmt1P50431 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Shmt1P50431 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.68□□□□□ -1.98
Shmt1P50431 Gm22349-201ENSMUST00000157864 107 ntBASIC2.68□□□□□ -1.98
Shmt1P50431 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Shmt1P50431 Gm29603-201ENSMUST00000186792 334 ntBASIC2.68□□□□□ -1.98
Shmt1P50431 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.68□□□□□ -1.98
Shmt1P50431 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
Shmt1P50431 Gm26493-201ENSMUST00000083155 136 ntBASIC2.68□□□□□ -1.98
Shmt1P50431 Gm24929-201ENSMUST00000083403 139 ntBASIC2.68□□□□□ -1.98
Shmt1P50431 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Shmt1P50431 Snord89-201ENSMUST00000104516 110 ntBASIC2.67□□□□□ -1.98
Shmt1P50431 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC2.67□□□□□ -1.98
Shmt1P50431 Gm23600-201ENSMUST00000157260 71 ntBASIC2.67□□□□□ -1.98
Shmt1P50431 Gm25476-201ENSMUST00000175125 185 ntBASIC2.67□□□□□ -1.98
Shmt1P50431 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 141.1 ms