Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm24116-201ENSMUST00000103975 107 ntBASIC2.37□□□□□ -2.03
Ercc3P49135 Gm25421-201ENSMUST00000104218 164 ntBASIC2.37□□□□□ -2.03
Ercc3P49135 Gm6444-201ENSMUST00000119611 458 ntBASIC2.37□□□□□ -2.03
Ercc3P49135 Gm15692-201ENSMUST00000152173 352 ntBASIC2.37□□□□□ -2.03
Ercc3P49135 Mir1949-201ENSMUST00000157434 141 ntBASIC2.37□□□□□ -2.03
Ercc3P49135 Gm23670-201ENSMUST00000157469 119 ntBASIC2.37□□□□□ -2.03
Ercc3P49135 Gm26345-201ENSMUST00000157534 120 ntBASIC2.37□□□□□ -2.03
Ercc3P49135 Gm22215-201ENSMUST00000157558 96 ntBASIC2.37□□□□□ -2.03
Ercc3P49135 Gm24770-201ENSMUST00000158505 92 ntBASIC2.37□□□□□ -2.03
Ercc3P49135 Mir3086-201ENSMUST00000175072 87 ntBASIC2.37□□□□□ -2.03
Ercc3P49135 Gm24818-201ENSMUST00000175093 161 ntBASIC2.37□□□□□ -2.03
Ercc3P49135 Gm22951-201ENSMUST00000179471 107 ntBASIC2.37□□□□□ -2.03
Ercc3P49135 Igkv15-102-201ENSMUST00000197885 287 ntBASIC2.37□□□□□ -2.03
Ercc3P49135 AC164086.1-201ENSMUST00000221038 289 ntBASIC2.37□□□□□ -2.03
Ercc3P49135 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC2.37□□□□□ -2.03
Ercc3P49135 Mir301-201ENSMUST00000083655 86 ntBASIC2.37□□□□□ -2.03
Ercc3P49135 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Ercc3P49135 Mir374b-201ENSMUST00000102314 95 ntBASIC2.36□□□□□ -2.03
Ercc3P49135 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.36□□□□□ -2.03
Ercc3P49135 Gm24909-201ENSMUST00000157290 280 ntBASIC2.36□□□□□ -2.03
Ercc3P49135 Gm22315-201ENSMUST00000158010 143 ntBASIC2.36□□□□□ -2.03
Ercc3P49135 Rnu7-201ENSMUST00000158458 62 ntBASIC2.36□□□□□ -2.03
Ercc3P49135 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.36□□□□□ -2.03
Ercc3P49135 Gm27540-201ENSMUST00000184950 187 ntBASIC2.36□□□□□ -2.03
Ercc3P49135 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC2.36□□□□□ -2.03
Ercc3P49135 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.36□□□□□ -2.03
Ercc3P49135 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC2.36□□□□□ -2.03
Ercc3P49135 Gm24625-201ENSMUST00000082622 130 ntBASIC2.36□□□□□ -2.03
Ercc3P49135 Gm24355-201ENSMUST00000082858 122 ntBASIC2.36□□□□□ -2.03
Ercc3P49135 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Ercc3P49135 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Ercc3P49135 Gm25113-201ENSMUST00000157185 143 ntBASIC2.35□□□□□ -2.03
Ercc3P49135 Gm22217-201ENSMUST00000157556 313 ntBASIC2.35□□□□□ -2.03
Ercc3P49135 Gm25460-201ENSMUST00000157954 127 ntBASIC2.35□□□□□ -2.03
Ercc3P49135 Gm22537-201ENSMUST00000158172 199 ntBASIC2.35□□□□□ -2.03
Ercc3P49135 Gm9156-201ENSMUST00000189660 463 ntBASIC2.35□□□□□ -2.03
Ercc3P49135 Gm29140-201ENSMUST00000190187 476 ntBASIC2.35□□□□□ -2.03
Ercc3P49135 Gm24615-201ENSMUST00000083268 113 ntBASIC2.35□□□□□ -2.03
Ercc3P49135 Mir107-201ENSMUST00000083660 87 ntBASIC2.35□□□□□ -2.03
Ercc3P49135 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.34□□□□□ -2.03
Ercc3P49135 Gm23013-201ENSMUST00000104146 106 ntBASIC2.34□□□□□ -2.03
Ercc3P49135 n-R5s67-201ENSMUST00000104336 114 ntBASIC2.34□□□□□ -2.03
Ercc3P49135 Gm24984-201ENSMUST00000104454 133 ntBASIC2.34□□□□□ -2.03
Ercc3P49135 Gm24632-201ENSMUST00000122770 323 ntBASIC2.34□□□□□ -2.03
Ercc3P49135 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.34□□□□□ -2.03
Ercc3P49135 Gm22768-201ENSMUST00000158366 153 ntBASIC2.34□□□□□ -2.03
Ercc3P49135 Gm27793-201ENSMUST00000183405 76 ntBASIC2.34□□□□□ -2.03
Ercc3P49135 Mir6995-201ENSMUST00000183658 71 ntBASIC2.34□□□□□ -2.03
Ercc3P49135 Mir7016-201ENSMUST00000184308 72 ntBASIC2.34□□□□□ -2.03
Ercc3P49135 Mir6901-201ENSMUST00000185062 62 ntBASIC2.34□□□□□ -2.03
Ercc3P49135 Gm28849-201ENSMUST00000188127 174 ntBASIC2.34□□□□□ -2.03
Ercc3P49135 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC2.34□□□□□ -2.03
Ercc3P49135 Gm28330-201ENSMUST00000190353 171 ntBASIC2.34□□□□□ -2.03
Ercc3P49135 AC239878.2-201ENSMUST00000224048 464 ntBASIC2.34□□□□□ -2.03
Ercc3P49135 CT010454.1-201ENSMUST00000225975 265 ntBASIC2.34□□□□□ -2.03
Ercc3P49135 Gm5899-201ENSMUST00000071770 270 ntBASIC2.34□□□□□ -2.03
Ercc3P49135 Mir429-201ENSMUST00000083493 83 ntBASIC2.34□□□□□ -2.03
Ercc3P49135 Snora33-201ENSMUST00000093556 129 ntBASIC2.34□□□□□ -2.03
Ercc3P49135 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Ercc3P49135 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.34□□□□□ -2.04
Ercc3P49135 Gm26479-201ENSMUST00000122620 106 ntBASIC2.33□□□□□ -2.04
Ercc3P49135 Gm16328-201ENSMUST00000126985 196 ntBASIC2.33□□□□□ -2.04
Ercc3P49135 Trav20-201ENSMUST00000142754 347 ntBASIC2.33□□□□□ -2.04
Ercc3P49135 Gm25658-201ENSMUST00000158472 128 ntBASIC2.33□□□□□ -2.04
Ercc3P49135 Gm26468-201ENSMUST00000158644 106 ntBASIC2.33□□□□□ -2.04
Ercc3P49135 Gm20477-201ENSMUST00000174028 280 ntBASIC2.33□□□□□ -2.04
Ercc3P49135 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC2.33□□□□□ -2.04
Ercc3P49135 Gm32175-201ENSMUST00000193641 346 ntBASIC2.33□□□□□ -2.04
Ercc3P49135 AC115735.2-201ENSMUST00000227135 351 ntBASIC2.33□□□□□ -2.04
Ercc3P49135 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC2.33□□□□□ -2.04
Ercc3P49135 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Ercc3P49135 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Ercc3P49135 Gm25875-201ENSMUST00000104323 107 ntBASIC2.32□□□□□ -2.04
Ercc3P49135 Gm22984-201ENSMUST00000122751 122 ntBASIC2.32□□□□□ -2.04
Ercc3P49135 Gm24478-201ENSMUST00000157439 158 ntBASIC2.32□□□□□ -2.04
Ercc3P49135 Gm25643-201ENSMUST00000158874 103 ntBASIC2.32□□□□□ -2.04
Ercc3P49135 Mir6905-201ENSMUST00000184228 70 ntBASIC2.32□□□□□ -2.04
Ercc3P49135 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Ercc3P49135 Gm45543-201ENSMUST00000209327 88 ntBASIC2.32□□□□□ -2.04
Ercc3P49135 Gm45456-201ENSMUST00000210841 243 ntBASIC2.32□□□□□ -2.04
Ercc3P49135 AC125374.2-201ENSMUST00000214278 162 ntBASIC2.32□□□□□ -2.04
Ercc3P49135 Gm46997-201ENSMUST00000222108 217 ntBASIC2.32□□□□□ -2.04
Ercc3P49135 AL606472.1-201ENSMUST00000224628 275 ntBASIC2.32□□□□□ -2.04
Ercc3P49135 Gm24164-201ENSMUST00000093663 104 ntBASIC2.32□□□□□ -2.04
Ercc3P49135 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
Ercc3P49135 Gm25377-201ENSMUST00000104334 129 ntBASIC2.31□□□□□ -2.04
Ercc3P49135 Gm26405-201ENSMUST00000158495 100 ntBASIC2.31□□□□□ -2.04
Ercc3P49135 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.31□□□□□ -2.04
Ercc3P49135 Snord87-201ENSMUST00000175437 87 ntBASIC2.31□□□□□ -2.04
Ercc3P49135 Gm22510-201ENSMUST00000179304 79 ntBASIC2.31□□□□□ -2.04
Ercc3P49135 Gm26336-201ENSMUST00000179449 79 ntBASIC2.31□□□□□ -2.04
Ercc3P49135 Gm26390-201ENSMUST00000179628 79 ntBASIC2.31□□□□□ -2.04
Ercc3P49135 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC2.31□□□□□ -2.04
Ercc3P49135 Gm43220-201ENSMUST00000199299 282 ntBASIC2.31□□□□□ -2.04
Ercc3P49135 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC2.31□□□□□ -2.04
Ercc3P49135 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Ercc3P49135 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Ercc3P49135 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
Ercc3P49135 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Ercc3P49135 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.3□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms