Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Rfx1P48377 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Rfx1P48377 Gm11253-201ENSMUST00000118486 201 ntBASIC3.37□□□□□ -1.87
Rfx1P48377 Gm13922-201ENSMUST00000119505 156 ntBASIC3.37□□□□□ -1.87
Rfx1P48377 Gm23791-201ENSMUST00000122553 293 ntBASIC3.37□□□□□ -1.87
Rfx1P48377 Gm14389-201ENSMUST00000140453 241 ntBASIC3.37□□□□□ -1.87
Rfx1P48377 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC3.37□□□□□ -1.87
Rfx1P48377 Gm23716-201ENSMUST00000157348 144 ntBASIC3.37□□□□□ -1.87
Rfx1P48377 Gm26403-201ENSMUST00000158500 105 ntBASIC3.37□□□□□ -1.87
Rfx1P48377 Gm37693-201ENSMUST00000194562 234 ntBASIC3.37□□□□□ -1.87
Rfx1P48377 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC3.37□□□□□ -1.87
Rfx1P48377 Mir7215-201ENSMUST00000200383 51 ntBASIC3.37□□□□□ -1.87
Rfx1P48377 Gm25513-201ENSMUST00000083861 162 ntBASIC3.37□□□□□ -1.87
Rfx1P48377 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Rfx1P48377 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
Rfx1P48377 AC160984.1-201ENSMUST00000225855 3154 ntBASIC3.37□□□□□ -1.87
Rfx1P48377 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Rfx1P48377 Gm12954-201ENSMUST00000118610 611 ntBASIC3.36□□□□□ -1.87
Rfx1P48377 Gm23380-201ENSMUST00000158448 103 ntBASIC3.36□□□□□ -1.87
Rfx1P48377 Gm26160-201ENSMUST00000158965 63 ntBASIC3.36□□□□□ -1.87
Rfx1P48377 Gm22699-201ENSMUST00000175376 105 ntBASIC3.36□□□□□ -1.87
Rfx1P48377 Mir8103-201ENSMUST00000183945 107 ntBASIC3.36□□□□□ -1.87
Rfx1P48377 Gm42807-201ENSMUST00000200141 329 ntBASIC3.36□□□□□ -1.87
Rfx1P48377 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.36□□□□□ -1.87
Rfx1P48377 AC134601.1-201ENSMUST00000221058 109 ntBASIC3.36□□□□□ -1.87
Rfx1P48377 AC151902.2-201ENSMUST00000226419 301 ntBASIC3.36□□□□□ -1.87
Rfx1P48377 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Rfx1P48377 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Rfx1P48377 Gm22956-201ENSMUST00000122520 80 ntBASIC3.35□□□□□ -1.87
Rfx1P48377 Gm25825-201ENSMUST00000157091 124 ntBASIC3.35□□□□□ -1.87
Rfx1P48377 Gm25464-201ENSMUST00000175481 107 ntBASIC3.35□□□□□ -1.87
Rfx1P48377 Mir21b-201ENSMUST00000184317 108 ntBASIC3.35□□□□□ -1.87
Rfx1P48377 Gm44052-201ENSMUST00000203382 396 ntBASIC3.35□□□□□ -1.87
Rfx1P48377 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Rfx1P48377 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Rfx1P48377 AC159625.1-201ENSMUST00000220994 2625 ntBASIC3.35□□□□□ -1.87
Rfx1P48377 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Rfx1P48377 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
Rfx1P48377 Gm23609-201ENSMUST00000104542 127 ntBASIC3.34□□□□□ -1.87
Rfx1P48377 Mir1298-201ENSMUST00000116681 98 ntBASIC3.34□□□□□ -1.87
Rfx1P48377 Gm23718-201ENSMUST00000157350 307 ntBASIC3.34□□□□□ -1.87
Rfx1P48377 Gm19257-201ENSMUST00000186121 183 ntBASIC3.34□□□□□ -1.87
Rfx1P48377 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Rfx1P48377 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC3.34□□□□□ -1.87
Rfx1P48377 Gm45386-201ENSMUST00000210194 218 ntBASIC3.34□□□□□ -1.87
Rfx1P48377 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Rfx1P48377 AC125374.3-201ENSMUST00000214983 2810 ntBASIC3.33□□□□□ -1.88
Rfx1P48377 Gm14536-201ENSMUST00000118324 138 ntBASIC3.33□□□□□ -1.88
Rfx1P48377 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC3.33□□□□□ -1.88
Rfx1P48377 Gm15027-201ENSMUST00000120922 138 ntBASIC3.33□□□□□ -1.88
Rfx1P48377 Gm22477-201ENSMUST00000122569 316 ntBASIC3.33□□□□□ -1.88
Rfx1P48377 Gm2830-201ENSMUST00000140330 385 ntBASIC3.33□□□□□ -1.88
Rfx1P48377 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC3.33□□□□□ -1.88
Rfx1P48377 Gm23983-201ENSMUST00000157142 114 ntBASIC3.33□□□□□ -1.88
Rfx1P48377 Gm22731-201ENSMUST00000158086 94 ntBASIC3.33□□□□□ -1.88
Rfx1P48377 Mir1927-201ENSMUST00000158579 109 ntBASIC3.33□□□□□ -1.88
Rfx1P48377 Gm24676-201ENSMUST00000158758 75 ntBASIC3.33□□□□□ -1.88
Rfx1P48377 Gm27527-201ENSMUST00000183903 99 ntBASIC3.33□□□□□ -1.88
Rfx1P48377 Gm27878-201ENSMUST00000184000 106 ntBASIC3.33□□□□□ -1.88
Rfx1P48377 Gm44338-201ENSMUST00000198614 110 ntBASIC3.33□□□□□ -1.88
Rfx1P48377 Gm35736-201ENSMUST00000203681 313 ntBASIC3.33□□□□□ -1.88
Rfx1P48377 AC125350.4-201ENSMUST00000225895 273 ntBASIC3.33□□□□□ -1.88
Rfx1P48377 Mir218-1-201ENSMUST00000083669 110 ntBASIC3.33□□□□□ -1.88
Rfx1P48377 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
Rfx1P48377 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.32□□□□□ -1.88
Rfx1P48377 Gm23043-201ENSMUST00000157890 109 ntBASIC3.32□□□□□ -1.88
Rfx1P48377 Gm22967-201ENSMUST00000157956 239 ntBASIC3.32□□□□□ -1.88
Rfx1P48377 Gm22330-201ENSMUST00000158068 115 ntBASIC3.32□□□□□ -1.88
Rfx1P48377 Mir7k-201ENSMUST00000184115 110 ntBASIC3.32□□□□□ -1.88
Rfx1P48377 Gm43932-201ENSMUST00000204499 52 ntBASIC3.32□□□□□ -1.88
Rfx1P48377 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC3.32□□□□□ -1.88
Rfx1P48377 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC3.32□□□□□ -1.88
Rfx1P48377 Gm25130-201ENSMUST00000082650 156 ntBASIC3.32□□□□□ -1.88
Rfx1P48377 Mir488-201ENSMUST00000093595 109 ntBASIC3.32□□□□□ -1.88
Rfx1P48377 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Rfx1P48377 Gm43373-201ENSMUST00000202552 2870 ntBASIC3.32□□□□□ -1.88
Rfx1P48377 AC124456.1-201ENSMUST00000217391 2597 ntBASIC3.31□□□□□ -1.88
Rfx1P48377 Gm26293-201ENSMUST00000104170 84 ntBASIC3.31□□□□□ -1.88
Rfx1P48377 Gm22023-201ENSMUST00000104354 130 ntBASIC3.31□□□□□ -1.88
Rfx1P48377 Gm24443-201ENSMUST00000157242 132 ntBASIC3.31□□□□□ -1.88
Rfx1P48377 Gm25476-201ENSMUST00000175125 185 ntBASIC3.31□□□□□ -1.88
Rfx1P48377 Mir6917-201ENSMUST00000184111 61 ntBASIC3.31□□□□□ -1.88
Rfx1P48377 Gm28912-201ENSMUST00000189001 234 ntBASIC3.31□□□□□ -1.88
Rfx1P48377 Gm42623-201ENSMUST00000197225 379 ntBASIC3.31□□□□□ -1.88
Rfx1P48377 Gm43587-201ENSMUST00000199590 204 ntBASIC3.31□□□□□ -1.88
Rfx1P48377 Mir155-201ENSMUST00000083463 65 ntBASIC3.31□□□□□ -1.88
Rfx1P48377 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC3.31□□□□□ -1.88
Rfx1P48377 Gm43877-201ENSMUST00000205029 2238 ntBASIC3.31□□□□□ -1.88
Rfx1P48377 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Rfx1P48377 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Rfx1P48377 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Rfx1P48377 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Rfx1P48377 Gm8260-201ENSMUST00000119230 353 ntBASIC3.3□□□□□ -1.88
Rfx1P48377 Gm26088-201ENSMUST00000157896 131 ntBASIC3.3□□□□□ -1.88
Rfx1P48377 Gm24681-201ENSMUST00000158760 107 ntBASIC3.3□□□□□ -1.88
Rfx1P48377 Gm23337-201ENSMUST00000158959 118 ntBASIC3.3□□□□□ -1.88
Rfx1P48377 Mir6376-201ENSMUST00000185149 131 ntBASIC3.3□□□□□ -1.88
Rfx1P48377 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.3□□□□□ -1.88
Rfx1P48377 Snord118-201ENSMUST00000082965 135 ntBASIC3.3□□□□□ -1.88
Rfx1P48377 Gm10813-201ENSMUST00000099936 90 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms