Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm12785-201ENSMUST00000122052 172 ntBASIC1.73□□□□□ -2.13
Traf1P39428 Gm22598-201ENSMUST00000157600 127 ntBASIC1.73□□□□□ -2.13
Traf1P39428 Gm25423-201ENSMUST00000157609 107 ntBASIC1.73□□□□□ -2.13
Traf1P39428 Gm22085-201ENSMUST00000158344 110 ntBASIC1.73□□□□□ -2.13
Traf1P39428 Gm23208-201ENSMUST00000158666 127 ntBASIC1.73□□□□□ -2.13
Traf1P39428 Gm28992-201ENSMUST00000190534 139 ntBASIC1.73□□□□□ -2.13
Traf1P39428 AC164117.2-201ENSMUST00000222090 327 ntBASIC1.73□□□□□ -2.13
Traf1P39428 Gm11351-202ENSMUST00000225724 478 ntBASIC1.73□□□□□ -2.13
Traf1P39428 Gm10092-201ENSMUST00000077110 180 ntBASIC1.73□□□□□ -2.13
Traf1P39428 Gm23851-201ENSMUST00000083831 103 ntBASIC1.73□□□□□ -2.13
Traf1P39428 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Traf1P39428 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Traf1P39428 Gm15115-201ENSMUST00000121145 264 ntBASIC1.72□□□□□ -2.13
Traf1P39428 Gm25671-201ENSMUST00000178612 105 ntBASIC1.72□□□□□ -2.13
Traf1P39428 Gm23307-201ENSMUST00000179167 105 ntBASIC1.72□□□□□ -2.13
Traf1P39428 Gm25286-201ENSMUST00000179790 105 ntBASIC1.72□□□□□ -2.13
Traf1P39428 Gm19123-201ENSMUST00000190716 651 ntBASIC1.72□□□□□ -2.13
Traf1P39428 Gm28408-201ENSMUST00000191557 463 ntBASIC1.72□□□□□ -2.13
Traf1P39428 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC1.72□□□□□ -2.13
Traf1P39428 Gm16976-205ENSMUST00000227324 226 ntBASIC1.72□□□□□ -2.13
Traf1P39428 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
Traf1P39428 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.71□□□□□ -2.14
Traf1P39428 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC1.71□□□□□ -2.14
Traf1P39428 Gm24277-201ENSMUST00000158661 104 ntBASIC1.71□□□□□ -2.14
Traf1P39428 Gm28110-201ENSMUST00000185782 315 ntBASIC1.71□□□□□ -2.14
Traf1P39428 Gm29057-201ENSMUST00000186468 315 ntBASIC1.71□□□□□ -2.14
Traf1P39428 Gm29661-201ENSMUST00000186781 315 ntBASIC1.71□□□□□ -2.14
Traf1P39428 Gm28737-201ENSMUST00000186808 315 ntBASIC1.71□□□□□ -2.14
Traf1P39428 Gm29147-201ENSMUST00000186846 315 ntBASIC1.71□□□□□ -2.14
Traf1P39428 Gm29118-201ENSMUST00000186908 315 ntBASIC1.71□□□□□ -2.14
Traf1P39428 Gm28433-201ENSMUST00000187085 315 ntBASIC1.71□□□□□ -2.14
Traf1P39428 Gm29227-201ENSMUST00000187139 315 ntBASIC1.71□□□□□ -2.14
Traf1P39428 Gm28759-201ENSMUST00000187621 315 ntBASIC1.71□□□□□ -2.14
Traf1P39428 Gm28831-201ENSMUST00000187739 315 ntBASIC1.71□□□□□ -2.14
Traf1P39428 Gm28200-201ENSMUST00000187778 315 ntBASIC1.71□□□□□ -2.14
Traf1P39428 Gm29034-201ENSMUST00000188099 315 ntBASIC1.71□□□□□ -2.14
Traf1P39428 Gm28752-201ENSMUST00000188340 315 ntBASIC1.71□□□□□ -2.14
Traf1P39428 Gm29378-201ENSMUST00000188723 315 ntBASIC1.71□□□□□ -2.14
Traf1P39428 Gm28569-201ENSMUST00000188748 315 ntBASIC1.71□□□□□ -2.14
Traf1P39428 Gm28120-201ENSMUST00000188812 315 ntBASIC1.71□□□□□ -2.14
Traf1P39428 Gm29308-201ENSMUST00000188863 315 ntBASIC1.71□□□□□ -2.14
Traf1P39428 Gm28369-201ENSMUST00000188993 315 ntBASIC1.71□□□□□ -2.14
Traf1P39428 Gm28537-201ENSMUST00000189026 315 ntBASIC1.71□□□□□ -2.14
Traf1P39428 Gm28909-201ENSMUST00000189406 315 ntBASIC1.71□□□□□ -2.14
Traf1P39428 Gm28861-201ENSMUST00000189681 315 ntBASIC1.71□□□□□ -2.14
Traf1P39428 Gm29180-201ENSMUST00000190003 315 ntBASIC1.71□□□□□ -2.14
Traf1P39428 Gm29575-201ENSMUST00000190597 315 ntBASIC1.71□□□□□ -2.14
Traf1P39428 Gm29631-201ENSMUST00000191065 315 ntBASIC1.71□□□□□ -2.14
Traf1P39428 Gm28160-201ENSMUST00000191229 315 ntBASIC1.71□□□□□ -2.14
Traf1P39428 Gm29469-201ENSMUST00000191448 315 ntBASIC1.71□□□□□ -2.14
Traf1P39428 Gm37129-201ENSMUST00000195791 315 ntBASIC1.71□□□□□ -2.14
Traf1P39428 Gm44483-201ENSMUST00000197203 97 ntBASIC1.71□□□□□ -2.14
Traf1P39428 Gm23625-201ENSMUST00000082457 100 ntBASIC1.71□□□□□ -2.14
Traf1P39428 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.71□□□□□ -2.14
Traf1P39428 Mir653-201ENSMUST00000102402 85 ntBASIC1.7□□□□□ -2.14
Traf1P39428 Gm24818-201ENSMUST00000175093 161 ntBASIC1.7□□□□□ -2.14
Traf1P39428 Gm24366-201ENSMUST00000175383 86 ntBASIC1.7□□□□□ -2.14
Traf1P39428 Gm23267-201ENSMUST00000178490 132 ntBASIC1.7□□□□□ -2.14
Traf1P39428 Gm22862-201ENSMUST00000178593 121 ntBASIC1.7□□□□□ -2.14
Traf1P39428 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
Traf1P39428 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Traf1P39428 Mir181a-1-201ENSMUST00000083631 87 ntBASIC1.7□□□□□ -2.14
Traf1P39428 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.69□□□□□ -2.14
Traf1P39428 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Traf1P39428 Gm23355-201ENSMUST00000177614 107 ntBASIC1.69□□□□□ -2.14
Traf1P39428 Gm25450-201ENSMUST00000179144 107 ntBASIC1.69□□□□□ -2.14
Traf1P39428 Gm23148-201ENSMUST00000180367 107 ntBASIC1.69□□□□□ -2.14
Traf1P39428 Gm29613-201ENSMUST00000185846 313 ntBASIC1.69□□□□□ -2.14
Traf1P39428 Gm29544-201ENSMUST00000188860 313 ntBASIC1.69□□□□□ -2.14
Traf1P39428 Gm28808-201ENSMUST00000190978 313 ntBASIC1.69□□□□□ -2.14
Traf1P39428 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.69□□□□□ -2.14
Traf1P39428 Gm45207-201ENSMUST00000207469 145 ntBASIC1.69□□□□□ -2.14
Traf1P39428 Gm25258-201ENSMUST00000083049 107 ntBASIC1.69□□□□□ -2.14
Traf1P39428 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Traf1P39428 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.68□□□□□ -2.14
Traf1P39428 Mir466f-2-201ENSMUST00000104805 94 ntBASIC1.68□□□□□ -2.14
Traf1P39428 Gm16358-201ENSMUST00000146046 210 ntBASIC1.68□□□□□ -2.14
Traf1P39428 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.68□□□□□ -2.14
Traf1P39428 Gm23232-201ENSMUST00000157300 105 ntBASIC1.68□□□□□ -2.14
Traf1P39428 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.68□□□□□ -2.14
Traf1P39428 Gm23122-201ENSMUST00000157645 103 ntBASIC1.68□□□□□ -2.14
Traf1P39428 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC1.68□□□□□ -2.14
Traf1P39428 Gm37338-201ENSMUST00000191986 127 ntBASIC1.68□□□□□ -2.14
Traf1P39428 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.68□□□□□ -2.14
Traf1P39428 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Traf1P39428 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Traf1P39428 Mir466f-3-201ENSMUST00000104788 94 ntBASIC1.67□□□□□ -2.14
Traf1P39428 Gm14307-201ENSMUST00000118930 291 ntBASIC1.67□□□□□ -2.14
Traf1P39428 Gm14297-201ENSMUST00000129110 291 ntBASIC1.67□□□□□ -2.14
Traf1P39428 Gm16362-201ENSMUST00000135189 214 ntBASIC1.67□□□□□ -2.14
Traf1P39428 Gm23558-201ENSMUST00000157823 80 ntBASIC1.67□□□□□ -2.14
Traf1P39428 Gm23779-201ENSMUST00000157938 64 ntBASIC1.67□□□□□ -2.14
Traf1P39428 Gm27540-201ENSMUST00000184950 187 ntBASIC1.67□□□□□ -2.14
Traf1P39428 Gm44473-201ENSMUST00000204039 152 ntBASIC1.67□□□□□ -2.14
Traf1P39428 Gm45543-201ENSMUST00000209327 88 ntBASIC1.67□□□□□ -2.14
Traf1P39428 Gm10264-201ENSMUST00000220589 429 ntBASIC1.67□□□□□ -2.14
Traf1P39428 Gm25930-201ENSMUST00000082785 107 ntBASIC1.67□□□□□ -2.14
Traf1P39428 Gm26049-201ENSMUST00000157313 108 ntBASIC1.66□□□□□ -2.14
Traf1P39428 Gm37089-201ENSMUST00000195616 129 ntBASIC1.66□□□□□ -2.14
Traf1P39428 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms