Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm15281-201ENSMUST00000125181 351 ntBASIC3.52□□□□□ -1.85
Msx1P13297 Gm25835-201ENSMUST00000158917 144 ntBASIC3.52□□□□□ -1.85
Msx1P13297 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Msx1P13297 Gm44355-201ENSMUST00000200417 104 ntBASIC3.52□□□□□ -1.85
Msx1P13297 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.52□□□□□ -1.85
Msx1P13297 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC3.52□□□□□ -1.85
Msx1P13297 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Msx1P13297 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Msx1P13297 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Msx1P13297 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Msx1P13297 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Msx1P13297 AC164164.1-201ENSMUST00000223245 2340 ntBASIC3.52□□□□□ -1.85
Msx1P13297 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.51□□□□□ -1.85
Msx1P13297 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Msx1P13297 AC127302.3-201ENSMUST00000215480 2791 ntBASIC3.51□□□□□ -1.85
Msx1P13297 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.51□□□□□ -1.85
Msx1P13297 Gm15180-201ENSMUST00000117745 492 ntBASIC3.51□□□□□ -1.85
Msx1P13297 Gm23113-201ENSMUST00000158477 99 ntBASIC3.51□□□□□ -1.85
Msx1P13297 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.51□□□□□ -1.85
Msx1P13297 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.51□□□□□ -1.85
Msx1P13297 Gm27580-201ENSMUST00000183666 149 ntBASIC3.51□□□□□ -1.85
Msx1P13297 Gm45031-201ENSMUST00000206800 288 ntBASIC3.51□□□□□ -1.85
Msx1P13297 mt-Ts2-201ENSMUST00000082416 59 ntBASIC3.51□□□□□ -1.85
Msx1P13297 Gm24626-201ENSMUST00000082621 161 ntBASIC3.51□□□□□ -1.85
Msx1P13297 Gm25800-201ENSMUST00000082636 134 ntBASIC3.51□□□□□ -1.85
Msx1P13297 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Msx1P13297 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Msx1P13297 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Msx1P13297 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
Msx1P13297 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.5□□□□□ -1.85
Msx1P13297 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Msx1P13297 Gm26420-201ENSMUST00000104273 103 ntBASIC3.5□□□□□ -1.85
Msx1P13297 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC3.5□□□□□ -1.85
Msx1P13297 Gm28282-201ENSMUST00000186072 186 ntBASIC3.5□□□□□ -1.85
Msx1P13297 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Msx1P13297 Gm44600-201ENSMUST00000208540 111 ntBASIC3.5□□□□□ -1.85
Msx1P13297 AC124687.1-201ENSMUST00000221868 189 ntBASIC3.5□□□□□ -1.85
Msx1P13297 Gm23297-201ENSMUST00000083184 127 ntBASIC3.5□□□□□ -1.85
Msx1P13297 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
Msx1P13297 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.5□□□□□ -1.85
Msx1P13297 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Msx1P13297 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Msx1P13297 Gm23697-201ENSMUST00000103897 110 ntBASIC3.49□□□□□ -1.85
Msx1P13297 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.49□□□□□ -1.85
Msx1P13297 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC3.49□□□□□ -1.85
Msx1P13297 Gm14923-201ENSMUST00000118270 155 ntBASIC3.49□□□□□ -1.85
Msx1P13297 Gm11704-201ENSMUST00000120031 214 ntBASIC3.49□□□□□ -1.85
Msx1P13297 Gm12412-201ENSMUST00000121867 328 ntBASIC3.49□□□□□ -1.85
Msx1P13297 Gm24061-201ENSMUST00000157489 120 ntBASIC3.49□□□□□ -1.85
Msx1P13297 Gm22163-201ENSMUST00000158408 135 ntBASIC3.49□□□□□ -1.85
Msx1P13297 Gm25771-201ENSMUST00000158565 144 ntBASIC3.49□□□□□ -1.85
Msx1P13297 Gm23152-201ENSMUST00000175322 116 ntBASIC3.49□□□□□ -1.85
Msx1P13297 Gm28591-201ENSMUST00000185259 183 ntBASIC3.49□□□□□ -1.85
Msx1P13297 Gm44482-201ENSMUST00000199232 103 ntBASIC3.49□□□□□ -1.85
Msx1P13297 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC3.49□□□□□ -1.85
Msx1P13297 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.49□□□□□ -1.85
Msx1P13297 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.49□□□□□ -1.85
Msx1P13297 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Msx1P13297 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.49□□□□□ -1.85
Msx1P13297 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
Msx1P13297 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
Msx1P13297 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Msx1P13297 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
Msx1P13297 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.48□□□□□ -1.85
Msx1P13297 Gm22988-201ENSMUST00000122759 144 ntBASIC3.48□□□□□ -1.85
Msx1P13297 Gm25438-201ENSMUST00000158281 110 ntBASIC3.48□□□□□ -1.85
Msx1P13297 Mir3094-201ENSMUST00000175121 64 ntBASIC3.48□□□□□ -1.85
Msx1P13297 Gm22108-201ENSMUST00000177961 106 ntBASIC3.48□□□□□ -1.85
Msx1P13297 Gm24798-201ENSMUST00000179334 106 ntBASIC3.48□□□□□ -1.85
Msx1P13297 Gm21007-201ENSMUST00000221024 326 ntBASIC3.48□□□□□ -1.85
Msx1P13297 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.48□□□□□ -1.85
Msx1P13297 Gm23246-201ENSMUST00000083371 67 ntBASIC3.48□□□□□ -1.85
Msx1P13297 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.48□□□□□ -1.85
Msx1P13297 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Msx1P13297 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.47□□□□□ -1.85
Msx1P13297 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.47□□□□□ -1.85
Msx1P13297 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Msx1P13297 Snord78-201ENSMUST00000104032 66 ntBASIC3.47□□□□□ -1.85
Msx1P13297 Gm26387-201ENSMUST00000104238 132 ntBASIC3.47□□□□□ -1.85
Msx1P13297 Gm25878-201ENSMUST00000104327 93 ntBASIC3.47□□□□□ -1.85
Msx1P13297 Gm14674-201ENSMUST00000117816 342 ntBASIC3.47□□□□□ -1.85
Msx1P13297 Gm15733-201ENSMUST00000132957 242 ntBASIC3.47□□□□□ -1.85
Msx1P13297 Gm23234-201ENSMUST00000157304 134 ntBASIC3.47□□□□□ -1.85
Msx1P13297 Gm22310-201ENSMUST00000157509 116 ntBASIC3.47□□□□□ -1.85
Msx1P13297 Gm26415-201ENSMUST00000157673 292 ntBASIC3.47□□□□□ -1.85
Msx1P13297 Gm22129-201ENSMUST00000179034 107 ntBASIC3.47□□□□□ -1.85
Msx1P13297 Gm29658-201ENSMUST00000185404 230 ntBASIC3.47□□□□□ -1.85
Msx1P13297 Gm2189-201ENSMUST00000201419 429 ntBASIC3.47□□□□□ -1.85
Msx1P13297 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.47□□□□□ -1.85
Msx1P13297 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.47□□□□□ -1.85
Msx1P13297 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.47□□□□□ -1.85
Msx1P13297 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
Msx1P13297 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.46□□□□□ -1.85
Msx1P13297 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Msx1P13297 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
Msx1P13297 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.46□□□□□ -1.86
Msx1P13297 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.46□□□□□ -1.86
Msx1P13297 Gm24627-201ENSMUST00000122764 138 ntBASIC3.46□□□□□ -1.86
Msx1P13297 Gm23123-201ENSMUST00000157648 144 ntBASIC3.46□□□□□ -1.86
Msx1P13297 Gm23381-201ENSMUST00000157676 94 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms