Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm44976-201ENSMUST00000205543 261 ntBASIC3.33□□□□□ -1.88
RaraP11416 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.33□□□□□ -1.88
RaraP11416 AF357428-201ENSMUST00000083815 69 ntBASIC3.33□□□□□ -1.88
RaraP11416 Gm25684-201ENSMUST00000083941 107 ntBASIC3.33□□□□□ -1.88
RaraP11416 Snord64-201ENSMUST00000104003 67 ntBASIC3.32□□□□□ -1.88
RaraP11416 Gm12513-201ENSMUST00000118617 352 ntBASIC3.32□□□□□ -1.88
RaraP11416 Gm26084-201ENSMUST00000157903 104 ntBASIC3.32□□□□□ -1.88
RaraP11416 Gm22665-201ENSMUST00000158720 275 ntBASIC3.32□□□□□ -1.88
RaraP11416 Gm25069-201ENSMUST00000175238 86 ntBASIC3.32□□□□□ -1.88
RaraP11416 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RaraP11416 Gm43239-201ENSMUST00000200131 201 ntBASIC3.32□□□□□ -1.88
RaraP11416 Gm22738-201ENSMUST00000083440 147 ntBASIC3.32□□□□□ -1.88
RaraP11416 Mir184-201ENSMUST00000083662 69 ntBASIC3.32□□□□□ -1.88
RaraP11416 Gm25006-201ENSMUST00000083813 107 ntBASIC3.32□□□□□ -1.88
RaraP11416 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
RaraP11416 AC125374.3-201ENSMUST00000214983 2810 ntBASIC3.32□□□□□ -1.88
RaraP11416 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RaraP11416 Mir450b-201ENSMUST00000102095 82 ntBASIC3.31□□□□□ -1.88
RaraP11416 Gm23326-201ENSMUST00000157419 105 ntBASIC3.31□□□□□ -1.88
RaraP11416 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RaraP11416 Mir3092-201ENSMUST00000174954 96 ntBASIC3.31□□□□□ -1.88
RaraP11416 Gm44308-201ENSMUST00000197080 99 ntBASIC3.31□□□□□ -1.88
RaraP11416 Gm42719-201ENSMUST00000197393 355 ntBASIC3.31□□□□□ -1.88
RaraP11416 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC3.31□□□□□ -1.88
RaraP11416 Mir201-201ENSMUST00000083470 66 ntBASIC3.31□□□□□ -1.88
RaraP11416 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
RaraP11416 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
RaraP11416 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.31□□□□□ -1.88
RaraP11416 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RaraP11416 Gm24119-201ENSMUST00000103979 246 ntBASIC3.3□□□□□ -1.88
RaraP11416 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC3.3□□□□□ -1.88
RaraP11416 Gm25623-201ENSMUST00000157216 108 ntBASIC3.3□□□□□ -1.88
RaraP11416 Gm25393-201ENSMUST00000157336 285 ntBASIC3.3□□□□□ -1.88
RaraP11416 Gm27374-201ENSMUST00000183660 81 ntBASIC3.3□□□□□ -1.88
RaraP11416 Gm29602-201ENSMUST00000186887 442 ntBASIC3.3□□□□□ -1.88
RaraP11416 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.3□□□□□ -1.88
RaraP11416 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.3□□□□□ -1.88
RaraP11416 CT033785.1-201ENSMUST00000224872 272 ntBASIC3.3□□□□□ -1.88
RaraP11416 Gm23738-201ENSMUST00000082828 171 ntBASIC3.3□□□□□ -1.88
RaraP11416 Gm26126-201ENSMUST00000083188 164 ntBASIC3.3□□□□□ -1.88
RaraP11416 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.3□□□□□ -1.88
RaraP11416 Gm23747-201ENSMUST00000104228 131 ntBASIC3.29□□□□□ -1.88
RaraP11416 Snord100-201ENSMUST00000116836 74 ntBASIC3.29□□□□□ -1.88
RaraP11416 Gm11356-201ENSMUST00000118974 192 ntBASIC3.29□□□□□ -1.88
RaraP11416 Gm15190-201ENSMUST00000120855 276 ntBASIC3.29□□□□□ -1.88
RaraP11416 Gm22845-201ENSMUST00000157712 104 ntBASIC3.29□□□□□ -1.88
RaraP11416 Gm25646-201ENSMUST00000178527 79 ntBASIC3.29□□□□□ -1.88
RaraP11416 Gm43381-201ENSMUST00000198553 165 ntBASIC3.29□□□□□ -1.88
RaraP11416 Gm8219-201ENSMUST00000218309 242 ntBASIC3.29□□□□□ -1.88
RaraP11416 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
RaraP11416 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.29□□□□□ -1.88
RaraP11416 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
RaraP11416 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.29□□□□□ -1.88
RaraP11416 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
RaraP11416 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
RaraP11416 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
RaraP11416 AC154515.1-201ENSMUST00000226085 2841 ntBASIC3.28□□□□□ -1.88
RaraP11416 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
RaraP11416 Gm25323-201ENSMUST00000122555 103 ntBASIC3.28□□□□□ -1.88
RaraP11416 Gm24627-201ENSMUST00000122764 138 ntBASIC3.28□□□□□ -1.88
RaraP11416 Gm25888-201ENSMUST00000157778 302 ntBASIC3.28□□□□□ -1.88
RaraP11416 Gm27668-201ENSMUST00000184188 120 ntBASIC3.28□□□□□ -1.88
RaraP11416 Gm28591-201ENSMUST00000185259 183 ntBASIC3.28□□□□□ -1.88
RaraP11416 Gm32381-201ENSMUST00000203192 476 ntBASIC3.28□□□□□ -1.88
RaraP11416 Mir124a-3-201ENSMUST00000083520 68 ntBASIC3.28□□□□□ -1.88
RaraP11416 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
RaraP11416 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
RaraP11416 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RaraP11416 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
RaraP11416 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
RaraP11416 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm24068-201ENSMUST00000104513 132 ntBASIC3.27□□□□□ -1.89
RaraP11416 Cox20-ps-201ENSMUST00000119872 353 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm12412-201ENSMUST00000121867 328 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm26091-201ENSMUST00000122704 82 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm2830-201ENSMUST00000140330 385 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC3.27□□□□□ -1.89
RaraP11416 Gm24573-201ENSMUST00000175499 112 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm25098-201ENSMUST00000177580 79 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm23356-201ENSMUST00000177610 79 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm24027-201ENSMUST00000177611 79 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm22511-201ENSMUST00000177628 79 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm22630-201ENSMUST00000177781 79 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm23560-201ENSMUST00000177782 79 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm25462-201ENSMUST00000177833 79 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm26059-201ENSMUST00000177865 79 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm22255-201ENSMUST00000177933 79 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm25146-201ENSMUST00000177976 79 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm25523-201ENSMUST00000178044 79 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm24585-201ENSMUST00000178104 79 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm22627-201ENSMUST00000178127 79 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm22912-201ENSMUST00000178242 79 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm24866-201ENSMUST00000178338 79 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm22524-201ENSMUST00000178357 79 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm25710-201ENSMUST00000178367 79 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm23575-201ENSMUST00000178406 79 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm24872-201ENSMUST00000178434 79 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm22449-201ENSMUST00000178924 79 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm24702-201ENSMUST00000178965 79 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm24206-201ENSMUST00000179011 79 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 115.6 ms