Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm17132-201ENSMUST00000109542 1158 ntBASIC1.26□□□□□ -2.21
Lire1P11260 Gm14846-201ENSMUST00000121868 216 ntBASIC1.26□□□□□ -2.21
Lire1P11260 Gm27271-201ENSMUST00000183509 170 ntBASIC1.26□□□□□ -2.21
Lire1P11260 Mir7059-201ENSMUST00000184825 59 ntBASIC1.26□□□□□ -2.21
Lire1P11260 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Lire1P11260 Gm24252-201ENSMUST00000083700 132 ntBASIC1.26□□□□□ -2.21
Lire1P11260 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.25□□□□□ -2.21
Lire1P11260 Gm24865-201ENSMUST00000103246 96 ntBASIC1.25□□□□□ -2.21
Lire1P11260 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.25□□□□□ -2.21
Lire1P11260 Gm23893-201ENSMUST00000158106 134 ntBASIC1.25□□□□□ -2.21
Lire1P11260 Gm22403-201ENSMUST00000174919 84 ntBASIC1.25□□□□□ -2.21
Lire1P11260 Gm27236-201ENSMUST00000184147 442 ntBASIC1.25□□□□□ -2.21
Lire1P11260 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC1.25□□□□□ -2.21
Lire1P11260 Gm45704-201ENSMUST00000212582 403 ntBASIC1.25□□□□□ -2.21
Lire1P11260 Gm33654-201ENSMUST00000221704 215 ntBASIC1.25□□□□□ -2.21
Lire1P11260 Gm24150-201ENSMUST00000082759 104 ntBASIC1.25□□□□□ -2.21
Lire1P11260 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Lire1P11260 Gm26301-201ENSMUST00000104813 95 ntBASIC1.24□□□□□ -2.21
Lire1P11260 Gm23336-201ENSMUST00000117023 123 ntBASIC1.24□□□□□ -2.21
Lire1P11260 Gm22199-201ENSMUST00000122660 126 ntBASIC1.24□□□□□ -2.21
Lire1P11260 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.24□□□□□ -2.21
Lire1P11260 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.24□□□□□ -2.21
Lire1P11260 Gm22447-201ENSMUST00000158155 92 ntBASIC1.24□□□□□ -2.21
Lire1P11260 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.24□□□□□ -2.21
Lire1P11260 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC1.24□□□□□ -2.21
Lire1P11260 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Lire1P11260 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Lire1P11260 Gm22003-201ENSMUST00000101885 107 ntBASIC1.23□□□□□ -2.21
Lire1P11260 Gm23013-201ENSMUST00000104146 106 ntBASIC1.23□□□□□ -2.21
Lire1P11260 Gm25170-201ENSMUST00000104191 129 ntBASIC1.23□□□□□ -2.21
Lire1P11260 Gm25805-201ENSMUST00000122788 108 ntBASIC1.23□□□□□ -2.21
Lire1P11260 Gm24777-201ENSMUST00000157644 107 ntBASIC1.23□□□□□ -2.21
Lire1P11260 Gm25884-201ENSMUST00000157782 62 ntBASIC1.23□□□□□ -2.21
Lire1P11260 Gm25976-201ENSMUST00000158695 130 ntBASIC1.23□□□□□ -2.21
Lire1P11260 Gm26363-201ENSMUST00000158866 83 ntBASIC1.23□□□□□ -2.21
Lire1P11260 Gm23410-201ENSMUST00000179967 107 ntBASIC1.23□□□□□ -2.21
Lire1P11260 Gm22756-201ENSMUST00000180118 107 ntBASIC1.23□□□□□ -2.21
Lire1P11260 Gm28661-201ENSMUST00000188231 681 ntBASIC1.23□□□□□ -2.21
Lire1P11260 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.23□□□□□ -2.21
Lire1P11260 Gm22306-201ENSMUST00000082692 107 ntBASIC1.23□□□□□ -2.21
Lire1P11260 Gm22505-201ENSMUST00000082956 108 ntBASIC1.23□□□□□ -2.21
Lire1P11260 Gm22363-201ENSMUST00000083100 108 ntBASIC1.23□□□□□ -2.21
Lire1P11260 Gm23814-201ENSMUST00000083230 102 ntBASIC1.23□□□□□ -2.21
Lire1P11260 Gm23095-201ENSMUST00000083446 107 ntBASIC1.23□□□□□ -2.21
Lire1P11260 Gm10033-201ENSMUST00000072427 1813 ntBASIC1.22□□□□□ -2.21
Lire1P11260 Gm26500-201ENSMUST00000101867 106 ntBASIC1.22□□□□□ -2.21
Lire1P11260 Gm15443-201ENSMUST00000118947 820 ntBASIC1.22□□□□□ -2.21
Lire1P11260 Gm23106-201ENSMUST00000157554 101 ntBASIC1.22□□□□□ -2.21
Lire1P11260 Gm27545-201ENSMUST00000184755 202 ntBASIC1.22□□□□□ -2.21
Lire1P11260 Gm38274-201ENSMUST00000195689 148 ntBASIC1.22□□□□□ -2.21
Lire1P11260 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.22□□□□□ -2.21
Lire1P11260 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.22□□□□□ -2.21
Lire1P11260 AC114916.1-201ENSMUST00000228465 494 ntBASIC1.22□□□□□ -2.21
Lire1P11260 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
Lire1P11260 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.21□□□□□ -2.22
Lire1P11260 Gm22780-201ENSMUST00000104084 132 ntBASIC1.21□□□□□ -2.22
Lire1P11260 Gm12432-201ENSMUST00000119540 186 ntBASIC1.21□□□□□ -2.22
Lire1P11260 Gm22985-201ENSMUST00000122754 116 ntBASIC1.21□□□□□ -2.22
Lire1P11260 Cfap61-214ENSMUST00000167179 183 ntBASIC1.21□□□□□ -2.22
Lire1P11260 Gm23191-201ENSMUST00000179147 107 ntBASIC1.21□□□□□ -2.22
Lire1P11260 Gm27668-201ENSMUST00000184188 120 ntBASIC1.21□□□□□ -2.22
Lire1P11260 Gm44726-201ENSMUST00000203427 217 ntBASIC1.21□□□□□ -2.22
Lire1P11260 Gm26164-201ENSMUST00000083793 104 ntBASIC1.21□□□□□ -2.22
Lire1P11260 Gm16358-201ENSMUST00000146046 210 ntBASIC1.2□□□□□ -2.22
Lire1P11260 Gm23328-201ENSMUST00000157418 132 ntBASIC1.2□□□□□ -2.22
Lire1P11260 Gm23083-201ENSMUST00000157851 116 ntBASIC1.2□□□□□ -2.22
Lire1P11260 Gm25011-201ENSMUST00000158398 126 ntBASIC1.2□□□□□ -2.22
Lire1P11260 Gm26029-201ENSMUST00000158659 132 ntBASIC1.2□□□□□ -2.22
Lire1P11260 Gm9227-201ENSMUST00000194733 566 ntBASIC1.2□□□□□ -2.22
Lire1P11260 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.2□□□□□ -2.22
Lire1P11260 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC1.2□□□□□ -2.22
Lire1P11260 Gm24037-201ENSMUST00000082871 180 ntBASIC1.2□□□□□ -2.22
Lire1P11260 Gm23721-201ENSMUST00000083005 107 ntBASIC1.2□□□□□ -2.22
Lire1P11260 Gm12309-201ENSMUST00000119889 182 ntBASIC1.19□□□□□ -2.22
Lire1P11260 Gm24487-201ENSMUST00000178017 63 ntBASIC1.19□□□□□ -2.22
Lire1P11260 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Lire1P11260 Gm24966-201ENSMUST00000082443 79 ntBASIC1.19□□□□□ -2.22
Lire1P11260 Snord35a-201ENSMUST00000083884 90 ntBASIC1.19□□□□□ -2.22
Lire1P11260 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC1.19□□□□□ -2.22
Lire1P11260 Gm14914-201ENSMUST00000117576 2031 ntBASIC1.18□□□□□ -2.22
Lire1P11260 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Lire1P11260 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.18□□□□□ -2.22
Lire1P11260 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.18□□□□□ -2.22
Lire1P11260 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Lire1P11260 Gm22279-201ENSMUST00000157200 93 ntBASIC1.18□□□□□ -2.22
Lire1P11260 Gm22425-201ENSMUST00000158532 138 ntBASIC1.18□□□□□ -2.22
Lire1P11260 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Lire1P11260 Gm20257-202ENSMUST00000188643 130 ntBASIC1.18□□□□□ -2.22
Lire1P11260 Gm28992-201ENSMUST00000190534 139 ntBASIC1.18□□□□□ -2.22
Lire1P11260 Gm28408-201ENSMUST00000191557 463 ntBASIC1.18□□□□□ -2.22
Lire1P11260 Gm37713-201ENSMUST00000191746 198 ntBASIC1.18□□□□□ -2.22
Lire1P11260 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC1.18□□□□□ -2.22
Lire1P11260 Gm23299-201ENSMUST00000082708 79 ntBASIC1.18□□□□□ -2.22
Lire1P11260 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.18□□□□□ -2.22
Lire1P11260 Gm11891-201ENSMUST00000121241 619 ntBASIC1.17□□□□□ -2.22
Lire1P11260 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.17□□□□□ -2.22
Lire1P11260 Gm24393-201ENSMUST00000158135 97 ntBASIC1.17□□□□□ -2.22
Lire1P11260 Gm25434-201ENSMUST00000158278 167 ntBASIC1.17□□□□□ -2.22
Lire1P11260 Gm23760-201ENSMUST00000158350 116 ntBASIC1.17□□□□□ -2.22
Lire1P11260 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms