Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC2.89□□□□□ -1.95
Hoxd3P09027 Gm24947-201ENSMUST00000158334 110 ntBASIC2.89□□□□□ -1.95
Hoxd3P09027 Gm29658-201ENSMUST00000185404 230 ntBASIC2.89□□□□□ -1.95
Hoxd3P09027 Mir7682-201ENSMUST00000198467 58 ntBASIC2.89□□□□□ -1.95
Hoxd3P09027 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC2.89□□□□□ -1.95
Hoxd3P09027 AC129219.3-201ENSMUST00000223790 196 ntBASIC2.89□□□□□ -1.95
Hoxd3P09027 Gm25800-201ENSMUST00000082636 134 ntBASIC2.89□□□□□ -1.95
Hoxd3P09027 Gm25205-201ENSMUST00000082841 103 ntBASIC2.89□□□□□ -1.95
Hoxd3P09027 Gm25581-201ENSMUST00000083410 164 ntBASIC2.89□□□□□ -1.95
Hoxd3P09027 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
Hoxd3P09027 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC2.89□□□□□ -1.95
Hoxd3P09027 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Hoxd3P09027 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Hoxd3P09027 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Hoxd3P09027 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
Hoxd3P09027 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Hoxd3P09027 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
Hoxd3P09027 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
Hoxd3P09027 Gm42888-201ENSMUST00000202425 4361 ntBASIC2.88□□□□□ -1.95
Hoxd3P09027 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Hoxd3P09027 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Hoxd3P09027 Gm14816-201ENSMUST00000117174 294 ntBASIC2.88□□□□□ -1.95
Hoxd3P09027 Gm11704-201ENSMUST00000120031 214 ntBASIC2.88□□□□□ -1.95
Hoxd3P09027 Gm14564-201ENSMUST00000122159 294 ntBASIC2.88□□□□□ -1.95
Hoxd3P09027 Gm22319-201ENSMUST00000157147 122 ntBASIC2.88□□□□□ -1.95
Hoxd3P09027 Gm23753-201ENSMUST00000157575 149 ntBASIC2.88□□□□□ -1.95
Hoxd3P09027 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC2.88□□□□□ -1.95
Hoxd3P09027 Gm28669-201ENSMUST00000188400 100 ntBASIC2.88□□□□□ -1.95
Hoxd3P09027 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC2.88□□□□□ -1.95
Hoxd3P09027 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Hoxd3P09027 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Hoxd3P09027 Gm45540-201ENSMUST00000209271 3606 ntBASIC2.88□□□□□ -1.95
Hoxd3P09027 AC121997.2-203ENSMUST00000228613 4192 ntBASIC2.88□□□□□ -1.95
Hoxd3P09027 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Hoxd3P09027 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Hoxd3P09027 Gm25727-201ENSMUST00000104522 131 ntBASIC2.87□□□□□ -1.95
Hoxd3P09027 Gm13862-201ENSMUST00000121220 197 ntBASIC2.87□□□□□ -1.95
Hoxd3P09027 Gm25887-201ENSMUST00000157777 84 ntBASIC2.87□□□□□ -1.95
Hoxd3P09027 Gm20693-201ENSMUST00000177431 211 ntBASIC2.87□□□□□ -1.95
Hoxd3P09027 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.87□□□□□ -1.95
Hoxd3P09027 Gm9156-201ENSMUST00000189660 463 ntBASIC2.87□□□□□ -1.95
Hoxd3P09027 Gm35736-201ENSMUST00000203681 313 ntBASIC2.87□□□□□ -1.95
Hoxd3P09027 AC100590.2-201ENSMUST00000219028 215 ntBASIC2.87□□□□□ -1.95
Hoxd3P09027 AC160865.1-201ENSMUST00000219873 151 ntBASIC2.87□□□□□ -1.95
Hoxd3P09027 AC124549.2-201ENSMUST00000224243 222 ntBASIC2.87□□□□□ -1.95
Hoxd3P09027 Mir323-201ENSMUST00000083683 86 ntBASIC2.87□□□□□ -1.95
Hoxd3P09027 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Hoxd3P09027 Gm45264-201ENSMUST00000210090 3995 ntBASIC2.87□□□□□ -1.95
Hoxd3P09027 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Hoxd3P09027 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
Hoxd3P09027 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Hoxd3P09027 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Hoxd3P09027 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Hoxd3P09027 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Hoxd3P09027 Gm24632-201ENSMUST00000122770 323 ntBASIC2.86□□□□□ -1.95
Hoxd3P09027 Gm24244-201ENSMUST00000157317 130 ntBASIC2.86□□□□□ -1.95
Hoxd3P09027 Gm25769-201ENSMUST00000158569 127 ntBASIC2.86□□□□□ -1.95
Hoxd3P09027 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
Hoxd3P09027 Gm25748-201ENSMUST00000175487 70 ntBASIC2.86□□□□□ -1.95
Hoxd3P09027 Mir6928-201ENSMUST00000185166 70 ntBASIC2.86□□□□□ -1.95
Hoxd3P09027 Gm37698-201ENSMUST00000192605 463 ntBASIC2.86□□□□□ -1.95
Hoxd3P09027 Gm2189-201ENSMUST00000201419 429 ntBASIC2.86□□□□□ -1.95
Hoxd3P09027 CT010444.1-201ENSMUST00000219963 3845 ntBASIC2.86□□□□□ -1.95
Hoxd3P09027 AC138401.2-201ENSMUST00000220461 365 ntBASIC2.86□□□□□ -1.95
Hoxd3P09027 Gm23736-201ENSMUST00000082553 75 ntBASIC2.86□□□□□ -1.95
Hoxd3P09027 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Hoxd3P09027 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Hoxd3P09027 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
Hoxd3P09027 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Hoxd3P09027 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Hoxd3P09027 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Hoxd3P09027 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Hoxd3P09027 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Hoxd3P09027 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Hoxd3P09027 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Hoxd3P09027 AC153948.1-201ENSMUST00000219080 3838 ntBASIC2.85□□□□□ -1.95
Hoxd3P09027 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC2.85□□□□□ -1.95
Hoxd3P09027 AC126033.1-201ENSMUST00000227628 6773 ntBASIC2.85□□□□□ -1.95
Hoxd3P09027 Gm25610-201ENSMUST00000104016 129 ntBASIC2.85□□□□□ -1.95
Hoxd3P09027 Gm22792-201ENSMUST00000157225 133 ntBASIC2.85□□□□□ -1.95
Hoxd3P09027 Gm23231-201ENSMUST00000157299 104 ntBASIC2.85□□□□□ -1.95
Hoxd3P09027 Gm22310-201ENSMUST00000157509 116 ntBASIC2.85□□□□□ -1.95
Hoxd3P09027 Gm25558-201ENSMUST00000158083 106 ntBASIC2.85□□□□□ -1.95
Hoxd3P09027 Gm24946-201ENSMUST00000158332 106 ntBASIC2.85□□□□□ -1.95
Hoxd3P09027 Gm23349-201ENSMUST00000158432 98 ntBASIC2.85□□□□□ -1.95
Hoxd3P09027 Gm27446-201ENSMUST00000183963 89 ntBASIC2.85□□□□□ -1.95
Hoxd3P09027 Mir7658-201ENSMUST00000184043 57 ntBASIC2.85□□□□□ -1.95
Hoxd3P09027 Mir7047-201ENSMUST00000184595 64 ntBASIC2.85□□□□□ -1.95
Hoxd3P09027 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC2.85□□□□□ -1.95
Hoxd3P09027 Gm44355-201ENSMUST00000200417 104 ntBASIC2.85□□□□□ -1.95
Hoxd3P09027 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC2.85□□□□□ -1.95
Hoxd3P09027 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC2.85□□□□□ -1.95
Hoxd3P09027 Gm45245-201ENSMUST00000210082 376 ntBASIC2.85□□□□□ -1.95
Hoxd3P09027 AC122327.1-201ENSMUST00000220778 108 ntBASIC2.85□□□□□ -1.95
Hoxd3P09027 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.85□□□□□ -1.95
Hoxd3P09027 Gm25124-201ENSMUST00000083345 164 ntBASIC2.85□□□□□ -1.95
Hoxd3P09027 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC2.85□□□□□ -1.95
Hoxd3P09027 Gm44842-201ENSMUST00000209173 3372 ntBASIC2.85□□□□□ -1.95
Hoxd3P09027 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Hoxd3P09027 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 220.8 ms