Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
Col3a1P08121 Gm43404-201ENSMUST00000200424 2534 ntBASIC2.3□□□□□ -2.04
Col3a1P08121 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Col3a1P08121 Gm22217-201ENSMUST00000157556 313 ntBASIC2.3□□□□□ -2.04
Col3a1P08121 Mir6338-201ENSMUST00000183389 109 ntBASIC2.3□□□□□ -2.04
Col3a1P08121 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC2.3□□□□□ -2.04
Col3a1P08121 AC154213.2-201ENSMUST00000227138 187 ntBASIC2.3□□□□□ -2.04
Col3a1P08121 Gm23095-201ENSMUST00000083446 107 ntBASIC2.3□□□□□ -2.04
Col3a1P08121 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Col3a1P08121 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.29□□□□□ -2.04
Col3a1P08121 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Col3a1P08121 Gm25068-201ENSMUST00000103895 110 ntBASIC2.29□□□□□ -2.04
Col3a1P08121 Gm25832-201ENSMUST00000104140 130 ntBASIC2.29□□□□□ -2.04
Col3a1P08121 Gm14922-201ENSMUST00000121131 163 ntBASIC2.29□□□□□ -2.04
Col3a1P08121 n-R5s150-201ENSMUST00000122705 108 ntBASIC2.29□□□□□ -2.04
Col3a1P08121 Gm26275-201ENSMUST00000157101 268 ntBASIC2.29□□□□□ -2.04
Col3a1P08121 Gm25220-201ENSMUST00000157546 95 ntBASIC2.29□□□□□ -2.04
Col3a1P08121 Gm25716-201ENSMUST00000158628 104 ntBASIC2.29□□□□□ -2.04
Col3a1P08121 Gm26337-201ENSMUST00000178000 79 ntBASIC2.29□□□□□ -2.04
Col3a1P08121 Gm25935-201ENSMUST00000178746 107 ntBASIC2.29□□□□□ -2.04
Col3a1P08121 Gm23922-201ENSMUST00000178792 79 ntBASIC2.29□□□□□ -2.04
Col3a1P08121 Gm24657-201ENSMUST00000180085 79 ntBASIC2.29□□□□□ -2.04
Col3a1P08121 Gm22996-201ENSMUST00000180236 79 ntBASIC2.29□□□□□ -2.04
Col3a1P08121 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC2.29□□□□□ -2.04
Col3a1P08121 Gm44470-201ENSMUST00000203913 142 ntBASIC2.29□□□□□ -2.04
Col3a1P08121 Gm24152-201ENSMUST00000082764 163 ntBASIC2.29□□□□□ -2.04
Col3a1P08121 Gm25896-201ENSMUST00000083713 136 ntBASIC2.29□□□□□ -2.04
Col3a1P08121 Gm23042-201ENSMUST00000083866 101 ntBASIC2.29□□□□□ -2.04
Col3a1P08121 Gm26314-201ENSMUST00000083891 107 ntBASIC2.29□□□□□ -2.04
Col3a1P08121 Gm25257-201ENSMUST00000083907 110 ntBASIC2.29□□□□□ -2.04
Col3a1P08121 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.29□□□□□ -2.04
Col3a1P08121 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Col3a1P08121 Gm37788-201ENSMUST00000193958 2705 ntBASIC2.29□□□□□ -2.04
Col3a1P08121 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Col3a1P08121 Gm14782-201ENSMUST00000120151 195 ntBASIC2.28□□□□□ -2.04
Col3a1P08121 Gm24379-201ENSMUST00000122695 86 ntBASIC2.28□□□□□ -2.04
Col3a1P08121 Gm23197-201ENSMUST00000158809 112 ntBASIC2.28□□□□□ -2.04
Col3a1P08121 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC2.28□□□□□ -2.04
Col3a1P08121 Mir7021-201ENSMUST00000197026 63 ntBASIC2.28□□□□□ -2.04
Col3a1P08121 Gm9251-201ENSMUST00000197202 628 ntBASIC2.28□□□□□ -2.04
Col3a1P08121 Mir721-201ENSMUST00000200230 88 ntBASIC2.28□□□□□ -2.04
Col3a1P08121 AC168880.2-201ENSMUST00000224488 201 ntBASIC2.28□□□□□ -2.04
Col3a1P08121 Gm24204-201ENSMUST00000082950 107 ntBASIC2.28□□□□□ -2.04
Col3a1P08121 Gm23454-201ENSMUST00000083332 133 ntBASIC2.28□□□□□ -2.04
Col3a1P08121 Gm13343-201ENSMUST00000116474 105 ntBASIC2.27□□□□□ -2.05
Col3a1P08121 Gm14748-201ENSMUST00000119819 411 ntBASIC2.27□□□□□ -2.05
Col3a1P08121 Gm22537-201ENSMUST00000158172 199 ntBASIC2.27□□□□□ -2.05
Col3a1P08121 Gm26406-201ENSMUST00000158503 124 ntBASIC2.27□□□□□ -2.05
Col3a1P08121 Gm24308-201ENSMUST00000177773 114 ntBASIC2.27□□□□□ -2.05
Col3a1P08121 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC2.27□□□□□ -2.05
Col3a1P08121 Gm26864-201ENSMUST00000181346 156 ntBASIC2.27□□□□□ -2.05
Col3a1P08121 Gm27979-201ENSMUST00000185126 56 ntBASIC2.27□□□□□ -2.05
Col3a1P08121 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC2.27□□□□□ -2.05
Col3a1P08121 Gm37693-201ENSMUST00000194562 234 ntBASIC2.27□□□□□ -2.05
Col3a1P08121 Gm42855-201ENSMUST00000197388 253 ntBASIC2.27□□□□□ -2.05
Col3a1P08121 Gm43991-201ENSMUST00000203751 274 ntBASIC2.27□□□□□ -2.05
Col3a1P08121 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.27□□□□□ -2.05
Col3a1P08121 AC124739.2-201ENSMUST00000222201 109 ntBASIC2.27□□□□□ -2.05
Col3a1P08121 Gm10351-201ENSMUST00000087694 125 ntBASIC2.27□□□□□ -2.05
Col3a1P08121 Gm4746-201ENSMUST00000120395 2406 ntBASIC2.27□□□□□ -2.05
Col3a1P08121 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Col3a1P08121 Gm37941-201ENSMUST00000192170 2309 ntBASIC2.27□□□□□ -2.05
Col3a1P08121 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Col3a1P08121 Gm5967-201ENSMUST00000172723 494 ntBASIC2.26□□□□□ -2.05
Col3a1P08121 Gm25198-201ENSMUST00000178574 110 ntBASIC2.26□□□□□ -2.05
Col3a1P08121 Gm43239-201ENSMUST00000200131 201 ntBASIC2.26□□□□□ -2.05
Col3a1P08121 CT025689.3-201ENSMUST00000223817 301 ntBASIC2.26□□□□□ -2.05
Col3a1P08121 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.26□□□□□ -2.05
Col3a1P08121 Gm26456-201ENSMUST00000082831 111 ntBASIC2.26□□□□□ -2.05
Col3a1P08121 Gm26495-201ENSMUST00000083152 137 ntBASIC2.26□□□□□ -2.05
Col3a1P08121 Mir146-201ENSMUST00000083667 65 ntBASIC2.26□□□□□ -2.05
Col3a1P08121 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Col3a1P08121 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Col3a1P08121 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.26□□□□□ -2.05
Col3a1P08121 Gm13992-201ENSMUST00000120558 156 ntBASIC2.26□□□□□ -2.05
Col3a1P08121 Gm23641-201ENSMUST00000157857 101 ntBASIC2.26□□□□□ -2.05
Col3a1P08121 Gm22516-201ENSMUST00000158266 124 ntBASIC2.26□□□□□ -2.05
Col3a1P08121 Gm22606-201ENSMUST00000158290 103 ntBASIC2.26□□□□□ -2.05
Col3a1P08121 Gm23196-201ENSMUST00000158806 107 ntBASIC2.26□□□□□ -2.05
Col3a1P08121 Gm28755-201ENSMUST00000185773 199 ntBASIC2.26□□□□□ -2.05
Col3a1P08121 Gm18991-201ENSMUST00000209225 746 ntBASIC2.26□□□□□ -2.05
Col3a1P08121 AC155167.3-201ENSMUST00000226349 217 ntBASIC2.26□□□□□ -2.05
Col3a1P08121 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.26□□□□□ -2.05
Col3a1P08121 Mir384-201ENSMUST00000083565 88 ntBASIC2.26□□□□□ -2.05
Col3a1P08121 Gm25651-201ENSMUST00000083782 119 ntBASIC2.26□□□□□ -2.05
Col3a1P08121 Gm23039-201ENSMUST00000083870 161 ntBASIC2.26□□□□□ -2.05
Col3a1P08121 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.26□□□□□ -2.05
Col3a1P08121 Gm27047-201ENSMUST00000183072 1819 ntBASIC2.25□□□□□ -2.05
Col3a1P08121 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC2.25□□□□□ -2.05
Col3a1P08121 Gm23651-201ENSMUST00000116755 120 ntBASIC2.25□□□□□ -2.05
Col3a1P08121 Gm25985-201ENSMUST00000122677 107 ntBASIC2.25□□□□□ -2.05
Col3a1P08121 Gm16162-201ENSMUST00000162296 297 ntBASIC2.25□□□□□ -2.05
Col3a1P08121 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC2.25□□□□□ -2.05
Col3a1P08121 Gm16404-201ENSMUST00000177739 468 ntBASIC2.25□□□□□ -2.05
Col3a1P08121 Gm6660-201ENSMUST00000179149 468 ntBASIC2.25□□□□□ -2.05
Col3a1P08121 Gm14598-201ENSMUST00000180109 468 ntBASIC2.25□□□□□ -2.05
Col3a1P08121 Gm14625-201ENSMUST00000180231 468 ntBASIC2.25□□□□□ -2.05
Col3a1P08121 Gm27761-201ENSMUST00000184091 131 ntBASIC2.25□□□□□ -2.05
Col3a1P08121 AC173345.2-201ENSMUST00000222795 153 ntBASIC2.25□□□□□ -2.05
Col3a1P08121 AC183092.1-201ENSMUST00000224301 153 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms