Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
TnfP06804 Gm37918-201ENSMUST00000192071 120 ntBASIC1.06□□□□□ -2.24
TnfP06804 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.06□□□□□ -2.24
TnfP06804 Snord1a-201ENSMUST00000083160 74 ntBASIC1.06□□□□□ -2.24
TnfP06804 Gm24494-201ENSMUST00000083804 81 ntBASIC1.06□□□□□ -2.24
TnfP06804 Gm22673-201ENSMUST00000104415 131 ntBASIC1.05□□□□□ -2.24
TnfP06804 Gm26363-201ENSMUST00000158866 83 ntBASIC1.05□□□□□ -2.24
TnfP06804 Gm45119-201ENSMUST00000207612 199 ntBASIC1.05□□□□□ -2.24
TnfP06804 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.05□□□□□ -2.24
TnfP06804 Gm24037-201ENSMUST00000082871 180 ntBASIC1.05□□□□□ -2.24
TnfP06804 Mir133a-1-201ENSMUST00000083465 68 ntBASIC1.05□□□□□ -2.24
TnfP06804 Gm23059-201ENSMUST00000158978 107 ntBASIC1.04□□□□□ -2.24
TnfP06804 Gm26180-201ENSMUST00000179942 107 ntBASIC1.04□□□□□ -2.24
TnfP06804 Gm20257-202ENSMUST00000188643 130 ntBASIC1.04□□□□□ -2.24
TnfP06804 Gm20144-201ENSMUST00000203031 165 ntBASIC1.04□□□□□ -2.24
TnfP06804 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC1.04□□□□□ -2.24
TnfP06804 Gm45704-201ENSMUST00000212582 403 ntBASIC1.04□□□□□ -2.24
TnfP06804 AC155712.1-201ENSMUST00000219704 160 ntBASIC1.04□□□□□ -2.24
TnfP06804 Gm33654-201ENSMUST00000221704 215 ntBASIC1.04□□□□□ -2.24
TnfP06804 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC1.04□□□□□ -2.24
TnfP06804 Gm11351-202ENSMUST00000225724 478 ntBASIC1.04□□□□□ -2.24
TnfP06804 AC151833.1-201ENSMUST00000227752 574 ntBASIC1.04□□□□□ -2.24
TnfP06804 Gm24152-201ENSMUST00000082764 163 ntBASIC1.04□□□□□ -2.24
TnfP06804 Gm25789-201ENSMUST00000083294 76 ntBASIC1.04□□□□□ -2.24
TnfP06804 Mir27b-201ENSMUST00000083541 73 ntBASIC1.04□□□□□ -2.24
TnfP06804 Gm22785-201ENSMUST00000104087 132 ntBASIC1.03□□□□□ -2.24
TnfP06804 Gm23836-201ENSMUST00000104434 129 ntBASIC1.03□□□□□ -2.24
TnfP06804 Gm12143-201ENSMUST00000119666 332 ntBASIC1.03□□□□□ -2.24
TnfP06804 Gm13967-201ENSMUST00000120404 380 ntBASIC1.03□□□□□ -2.24
TnfP06804 Mir1904-201ENSMUST00000122702 80 ntBASIC1.03□□□□□ -2.24
TnfP06804 Gm24487-201ENSMUST00000178017 63 ntBASIC1.03□□□□□ -2.24
TnfP06804 AL935138.1-201ENSMUST00000215309 196 ntBASIC1.03□□□□□ -2.24
TnfP06804 Gm24356-201ENSMUST00000082859 106 ntBASIC1.03□□□□□ -2.24
TnfP06804 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC1.03□□□□□ -2.24
TnfP06804 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
TnfP06804 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.03□□□□□ -2.25
TnfP06804 Gm26339-201ENSMUST00000102368 99 ntBASIC1.02□□□□□ -2.25
TnfP06804 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.02□□□□□ -2.25
TnfP06804 Gm24777-201ENSMUST00000157644 107 ntBASIC1.02□□□□□ -2.25
TnfP06804 Gm25434-201ENSMUST00000158278 167 ntBASIC1.02□□□□□ -2.25
TnfP06804 Gm23340-201ENSMUST00000158955 123 ntBASIC1.02□□□□□ -2.25
TnfP06804 Gm20462-201ENSMUST00000172623 408 ntBASIC1.02□□□□□ -2.25
TnfP06804 Gm23191-201ENSMUST00000179147 107 ntBASIC1.02□□□□□ -2.25
TnfP06804 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
TnfP06804 Gm27539-201ENSMUST00000184971 224 ntBASIC1.02□□□□□ -2.25
TnfP06804 Gm9251-201ENSMUST00000197202 628 ntBASIC1.02□□□□□ -2.25
TnfP06804 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC1.02□□□□□ -2.25
TnfP06804 Gm8125-201ENSMUST00000216602 738 ntBASIC1.02□□□□□ -2.25
TnfP06804 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.02□□□□□ -2.25
TnfP06804 Gm25274-201ENSMUST00000104296 135 ntBASIC1.01□□□□□ -2.25
TnfP06804 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC1.01□□□□□ -2.25
TnfP06804 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC1.01□□□□□ -2.25
TnfP06804 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC1.01□□□□□ -2.25
TnfP06804 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.01□□□□□ -2.25
TnfP06804 Gm2962-201ENSMUST00000159266 336 ntBASIC1.01□□□□□ -2.25
TnfP06804 Gm22929-201ENSMUST00000175517 107 ntBASIC1.01□□□□□ -2.25
TnfP06804 Gm43199-201ENSMUST00000200019 307 ntBASIC1.01□□□□□ -2.25
TnfP06804 AC122905.2-201ENSMUST00000220325 269 ntBASIC1.01□□□□□ -2.25
TnfP06804 AC126554.1-201ENSMUST00000222161 271 ntBASIC1.01□□□□□ -2.25
TnfP06804 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.01□□□□□ -2.25
TnfP06804 Gm23627-201ENSMUST00000082459 107 ntBASIC1.01□□□□□ -2.25
TnfP06804 Gm22502-201ENSMUST00000082488 107 ntBASIC1.01□□□□□ -2.25
TnfP06804 Gm25079-201ENSMUST00000082529 203 ntBASIC1.01□□□□□ -2.25
TnfP06804 Gm22977-201ENSMUST00000082615 107 ntBASIC1.01□□□□□ -2.25
TnfP06804 Gm24149-201ENSMUST00000082757 107 ntBASIC1.01□□□□□ -2.25
TnfP06804 Gm24038-201ENSMUST00000082872 159 ntBASIC1.01□□□□□ -2.25
TnfP06804 Gm12080-201ENSMUST00000119821 1883 ntBASIC1.01□□□□□ -2.25
TnfP06804 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.01□□□□□ -2.25
TnfP06804 Gm25805-201ENSMUST00000122788 108 ntBASIC1□□□□□ -2.25
TnfP06804 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1□□□□□ -2.25
TnfP06804 Gm23660-201ENSMUST00000178362 79 ntBASIC1□□□□□ -2.25
TnfP06804 Gm24088-201ENSMUST00000179100 79 ntBASIC1□□□□□ -2.25
TnfP06804 Gm28992-201ENSMUST00000190534 139 ntBASIC1□□□□□ -2.25
TnfP06804 Gm44960-201ENSMUST00000207403 141 ntBASIC1□□□□□ -2.25
TnfP06804 Gm45268-201ENSMUST00000210046 370 ntBASIC1□□□□□ -2.25
TnfP06804 AC125020.2-201ENSMUST00000218894 348 ntBASIC1□□□□□ -2.25
TnfP06804 Gm22685-201ENSMUST00000082848 106 ntBASIC1□□□□□ -2.25
TnfP06804 Gm24355-201ENSMUST00000082858 122 ntBASIC1□□□□□ -2.25
TnfP06804 Gm3867-201ENSMUST00000086108 279 ntBASIC1□□□□□ -2.25
TnfP06804 Gm10033-201ENSMUST00000072427 1813 ntBASIC0.99□□□□□ -2.25
TnfP06804 Gm26074-201ENSMUST00000104063 129 ntBASIC0.99□□□□□ -2.25
TnfP06804 Gm24588-201ENSMUST00000116696 83 ntBASIC0.99□□□□□ -2.25
TnfP06804 Gm22447-201ENSMUST00000158155 92 ntBASIC0.99□□□□□ -2.25
TnfP06804 Gm26213-201ENSMUST00000158582 110 ntBASIC0.99□□□□□ -2.25
TnfP06804 Gm24277-201ENSMUST00000158661 104 ntBASIC0.99□□□□□ -2.25
TnfP06804 Mir3061-201ENSMUST00000175129 91 ntBASIC0.99□□□□□ -2.25
TnfP06804 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC0.99□□□□□ -2.25
TnfP06804 Mir8116-201ENSMUST00000184134 97 ntBASIC0.99□□□□□ -2.25
TnfP06804 AC125167.1-201ENSMUST00000198698 141 ntBASIC0.99□□□□□ -2.25
TnfP06804 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC0.99□□□□□ -2.25
TnfP06804 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
TnfP06804 Gm24261-201ENSMUST00000083744 104 ntBASIC0.99□□□□□ -2.25
TnfP06804 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.99□□□□□ -2.25
TnfP06804 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
TnfP06804 Gm14782-201ENSMUST00000120151 195 ntBASIC0.98□□□□□ -2.25
TnfP06804 Gm14922-201ENSMUST00000121131 163 ntBASIC0.98□□□□□ -2.25
TnfP06804 Gm25909-201ENSMUST00000157619 121 ntBASIC0.98□□□□□ -2.25
TnfP06804 Gm24853-201ENSMUST00000158026 121 ntBASIC0.98□□□□□ -2.25
TnfP06804 Gm23893-201ENSMUST00000158106 134 ntBASIC0.98□□□□□ -2.25
TnfP06804 Mir5104-201ENSMUST00000175319 94 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms