Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm26004-201ENSMUST00000158804 116 ntBASIC0.53□□□□□ -2.32
CopeO89079 Gm25166-201ENSMUST00000158909 111 ntBASIC0.53□□□□□ -2.32
CopeO89079 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.53□□□□□ -2.32
CopeO89079 Gm16404-201ENSMUST00000177739 468 ntBASIC0.53□□□□□ -2.32
CopeO89079 Gm24315-201ENSMUST00000177835 127 ntBASIC0.53□□□□□ -2.32
CopeO89079 Gm7958-201ENSMUST00000178255 468 ntBASIC0.53□□□□□ -2.32
CopeO89079 Gm7258-201ENSMUST00000179317 300 ntBASIC0.53□□□□□ -2.32
CopeO89079 Gm7950-201ENSMUST00000179633 468 ntBASIC0.53□□□□□ -2.32
CopeO89079 Gm14598-201ENSMUST00000180109 468 ntBASIC0.53□□□□□ -2.32
CopeO89079 Gm14625-201ENSMUST00000180231 468 ntBASIC0.53□□□□□ -2.32
CopeO89079 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.53□□□□□ -2.32
CopeO89079 DQ267101-201ENSMUST00000082562 73 ntBASIC0.53□□□□□ -2.32
CopeO89079 Mir155-201ENSMUST00000083463 65 ntBASIC0.53□□□□□ -2.32
CopeO89079 Gm27313-201ENSMUST00000183500 142 ntBASIC0.52□□□□□ -2.33
CopeO89079 Gm34015-201ENSMUST00000194908 451 ntBASIC0.52□□□□□ -2.33
CopeO89079 AL772265.1-201ENSMUST00000214379 305 ntBASIC0.52□□□□□ -2.33
CopeO89079 AC100209.2-201ENSMUST00000224461 451 ntBASIC0.52□□□□□ -2.33
CopeO89079 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
CopeO89079 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
CopeO89079 Gm23203-201ENSMUST00000104374 107 ntBASIC0.51□□□□□ -2.33
CopeO89079 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
CopeO89079 Gm11254-201ENSMUST00000122368 653 ntBASIC0.51□□□□□ -2.33
CopeO89079 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
CopeO89079 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
CopeO89079 Gm38060-201ENSMUST00000194822 464 ntBASIC0.51□□□□□ -2.33
CopeO89079 Gm44325-201ENSMUST00000196757 77 ntBASIC0.51□□□□□ -2.33
CopeO89079 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC0.51□□□□□ -2.33
CopeO89079 Gm45403-201ENSMUST00000209453 276 ntBASIC0.51□□□□□ -2.33
CopeO89079 AC120394.1-201ENSMUST00000217153 351 ntBASIC0.51□□□□□ -2.33
CopeO89079 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC0.51□□□□□ -2.33
CopeO89079 AC098718.1-201ENSMUST00000226166 175 ntBASIC0.51□□□□□ -2.33
CopeO89079 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
CopeO89079 Gm22884-201ENSMUST00000083127 140 ntBASIC0.51□□□□□ -2.33
CopeO89079 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.51□□□□□ -2.33
CopeO89079 Gm25207-201ENSMUST00000093745 107 ntBASIC0.51□□□□□ -2.33
CopeO89079 Gm45557-201ENSMUST00000210004 1651 ntBASIC0.5□□□□□ -2.33
CopeO89079 Gm11859-201ENSMUST00000118099 455 ntBASIC0.5□□□□□ -2.33
CopeO89079 Gm24277-201ENSMUST00000158661 104 ntBASIC0.5□□□□□ -2.33
CopeO89079 Gm24308-201ENSMUST00000177773 114 ntBASIC0.5□□□□□ -2.33
CopeO89079 Mir6364-201ENSMUST00000183396 86 ntBASIC0.5□□□□□ -2.33
CopeO89079 Gm28435-201ENSMUST00000185496 108 ntBASIC0.5□□□□□ -2.33
CopeO89079 Gm36956-201ENSMUST00000193830 214 ntBASIC0.5□□□□□ -2.33
CopeO89079 Gm43220-201ENSMUST00000199299 282 ntBASIC0.5□□□□□ -2.33
CopeO89079 Mir1b-201ENSMUST00000117012 122 ntBASIC0.49□□□□□ -2.33
CopeO89079 Gm11794-201ENSMUST00000119446 237 ntBASIC0.49□□□□□ -2.33
CopeO89079 Gm12143-201ENSMUST00000119666 332 ntBASIC0.49□□□□□ -2.33
CopeO89079 Gm24409-201ENSMUST00000157881 152 ntBASIC0.49□□□□□ -2.33
CopeO89079 Gm24005-201ENSMUST00000158459 296 ntBASIC0.49□□□□□ -2.33
CopeO89079 Gm17067-202ENSMUST00000180131 123 ntBASIC0.49□□□□□ -2.33
CopeO89079 Gm28921-201ENSMUST00000190219 378 ntBASIC0.49□□□□□ -2.33
CopeO89079 Gm20144-201ENSMUST00000203031 165 ntBASIC0.49□□□□□ -2.33
CopeO89079 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.49□□□□□ -2.33
CopeO89079 Gm23055-201ENSMUST00000082805 94 ntBASIC0.49□□□□□ -2.33
CopeO89079 Gm25007-201ENSMUST00000083808 133 ntBASIC0.49□□□□□ -2.33
CopeO89079 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.48□□□□□ -2.33
CopeO89079 Gm22482-201ENSMUST00000122563 359 ntBASIC0.48□□□□□ -2.33
CopeO89079 Gm22818-201ENSMUST00000157446 104 ntBASIC0.48□□□□□ -2.33
CopeO89079 Gm28992-201ENSMUST00000190534 139 ntBASIC0.48□□□□□ -2.33
CopeO89079 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.48□□□□□ -2.33
CopeO89079 AC112972.1-201ENSMUST00000227329 365 ntBASIC0.48□□□□□ -2.33
CopeO89079 Gm24966-201ENSMUST00000082443 79 ntBASIC0.48□□□□□ -2.33
CopeO89079 Mir701-201ENSMUST00000102208 109 ntBASIC0.47□□□□□ -2.33
CopeO89079 Gm14296-202ENSMUST00000108931 750 ntBASIC0.47□□□□□ -2.33
CopeO89079 Gm23435-201ENSMUST00000157183 156 ntBASIC0.47□□□□□ -2.33
CopeO89079 Gm25486-201ENSMUST00000158726 63 ntBASIC0.47□□□□□ -2.33
CopeO89079 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC0.47□□□□□ -2.33
CopeO89079 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC0.47□□□□□ -2.33
CopeO89079 Mir15a-201ENSMUST00000175266 84 ntBASIC0.47□□□□□ -2.33
CopeO89079 Mir1954-201ENSMUST00000175595 86 ntBASIC0.47□□□□□ -2.33
CopeO89079 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC0.47□□□□□ -2.33
CopeO89079 Gm5034-201ENSMUST00000199115 634 ntBASIC0.47□□□□□ -2.33
CopeO89079 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.47□□□□□ -2.33
CopeO89079 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC0.47□□□□□ -2.33
CopeO89079 Gm25789-201ENSMUST00000083294 76 ntBASIC0.47□□□□□ -2.33
CopeO89079 Gm24523-201ENSMUST00000083965 132 ntBASIC0.47□□□□□ -2.33
CopeO89079 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
CopeO89079 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
CopeO89079 Gm26301-201ENSMUST00000104813 95 ntBASIC0.46□□□□□ -2.34
CopeO89079 Gm12255-201ENSMUST00000117184 284 ntBASIC0.46□□□□□ -2.34
CopeO89079 Gm12433-201ENSMUST00000119659 255 ntBASIC0.46□□□□□ -2.34
CopeO89079 Gm23542-201ENSMUST00000158208 96 ntBASIC0.46□□□□□ -2.34
CopeO89079 Gm24678-201ENSMUST00000158756 104 ntBASIC0.46□□□□□ -2.34
CopeO89079 Snora24-201ENSMUST00000174989 130 ntBASIC0.46□□□□□ -2.34
CopeO89079 Gm22166-201ENSMUST00000178419 121 ntBASIC0.46□□□□□ -2.34
CopeO89079 Gm23288-201ENSMUST00000179213 121 ntBASIC0.46□□□□□ -2.34
CopeO89079 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
CopeO89079 Gm44465-201ENSMUST00000199536 114 ntBASIC0.46□□□□□ -2.34
CopeO89079 Gm44976-201ENSMUST00000205543 261 ntBASIC0.46□□□□□ -2.34
CopeO89079 Gm44960-201ENSMUST00000207403 141 ntBASIC0.46□□□□□ -2.34
CopeO89079 Gm44830-201ENSMUST00000207667 584 ntBASIC0.46□□□□□ -2.34
CopeO89079 AC134334.1-201ENSMUST00000214277 255 ntBASIC0.46□□□□□ -2.34
CopeO89079 AC154636.2-201ENSMUST00000222538 161 ntBASIC0.46□□□□□ -2.34
CopeO89079 Gm11410-201ENSMUST00000120053 1143 ntBASIC0.45□□□□□ -2.34
CopeO89079 Gm22796-201ENSMUST00000157234 106 ntBASIC0.45□□□□□ -2.34
CopeO89079 Gm26358-201ENSMUST00000158215 97 ntBASIC0.45□□□□□ -2.34
CopeO89079 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
CopeO89079 Mir6540-201ENSMUST00000184886 108 ntBASIC0.45□□□□□ -2.34
CopeO89079 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.45□□□□□ -2.34
CopeO89079 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.45□□□□□ -2.34
CopeO89079 AC163033.1-201ENSMUST00000218608 157 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms