Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.37□□□□□ -2.03
Best1O88870 Gm23536-201ENSMUST00000157541 134 ntBASIC2.37□□□□□ -2.03
Best1O88870 Gm20477-201ENSMUST00000174028 280 ntBASIC2.37□□□□□ -2.03
Best1O88870 Gm22258-201ENSMUST00000177645 94 ntBASIC2.37□□□□□ -2.03
Best1O88870 Gm26032-201ENSMUST00000178535 94 ntBASIC2.37□□□□□ -2.03
Best1O88870 Gm25210-201ENSMUST00000178813 94 ntBASIC2.37□□□□□ -2.03
Best1O88870 Gm25157-201ENSMUST00000178914 94 ntBASIC2.37□□□□□ -2.03
Best1O88870 Gm22046-201ENSMUST00000179027 94 ntBASIC2.37□□□□□ -2.03
Best1O88870 Gm22941-201ENSMUST00000179630 94 ntBASIC2.37□□□□□ -2.03
Best1O88870 Gm25471-201ENSMUST00000180126 94 ntBASIC2.37□□□□□ -2.03
Best1O88870 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Best1O88870 Mir466e-201ENSMUST00000198862 84 ntBASIC2.37□□□□□ -2.03
Best1O88870 Mir466c-1-201ENSMUST00000200654 84 ntBASIC2.37□□□□□ -2.03
Best1O88870 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.37□□□□□ -2.03
Best1O88870 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Best1O88870 Gm15162-201ENSMUST00000119325 283 ntBASIC2.36□□□□□ -2.03
Best1O88870 Gm15861-201ENSMUST00000120979 339 ntBASIC2.36□□□□□ -2.03
Best1O88870 Gm22097-201ENSMUST00000157929 278 ntBASIC2.36□□□□□ -2.03
Best1O88870 Gm23194-201ENSMUST00000158813 105 ntBASIC2.36□□□□□ -2.03
Best1O88870 Mir6353-201ENSMUST00000183596 113 ntBASIC2.36□□□□□ -2.03
Best1O88870 Gm29308-201ENSMUST00000188863 315 ntBASIC2.36□□□□□ -2.03
Best1O88870 Mir6925-201ENSMUST00000197857 70 ntBASIC2.36□□□□□ -2.03
Best1O88870 AC125167.1-201ENSMUST00000198698 141 ntBASIC2.36□□□□□ -2.03
Best1O88870 Gm43865-201ENSMUST00000204721 127 ntBASIC2.36□□□□□ -2.03
Best1O88870 AC159896.1-201ENSMUST00000215264 215 ntBASIC2.36□□□□□ -2.03
Best1O88870 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.36□□□□□ -2.03
Best1O88870 Gm24412-201ENSMUST00000083426 109 ntBASIC2.36□□□□□ -2.03
Best1O88870 Snord7-201ENSMUST00000083781 97 ntBASIC2.36□□□□□ -2.03
Best1O88870 Gm23847-201ENSMUST00000083829 110 ntBASIC2.36□□□□□ -2.03
Best1O88870 Gm22517-201ENSMUST00000158265 136 ntBASIC2.35□□□□□ -2.03
Best1O88870 Gm23005-201ENSMUST00000158950 136 ntBASIC2.35□□□□□ -2.03
Best1O88870 Gm23977-201ENSMUST00000177871 74 ntBASIC2.35□□□□□ -2.03
Best1O88870 Gm3852-201ENSMUST00000182781 264 ntBASIC2.35□□□□□ -2.03
Best1O88870 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Best1O88870 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.35□□□□□ -2.03
Best1O88870 AC165293.1-201ENSMUST00000219669 329 ntBASIC2.35□□□□□ -2.03
Best1O88870 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.35□□□□□ -2.03
Best1O88870 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
Best1O88870 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Best1O88870 Gm25315-201ENSMUST00000116823 121 ntBASIC2.34□□□□□ -2.03
Best1O88870 Gm11204-201ENSMUST00000122438 147 ntBASIC2.34□□□□□ -2.03
Best1O88870 Gm23599-201ENSMUST00000157261 251 ntBASIC2.34□□□□□ -2.03
Best1O88870 Gm23223-201ENSMUST00000158119 127 ntBASIC2.34□□□□□ -2.03
Best1O88870 Gm22675-201ENSMUST00000158430 104 ntBASIC2.34□□□□□ -2.03
Best1O88870 Gm23548-201ENSMUST00000158963 106 ntBASIC2.34□□□□□ -2.03
Best1O88870 Gm23002-201ENSMUST00000179221 107 ntBASIC2.34□□□□□ -2.03
Best1O88870 Mir7683-201ENSMUST00000183842 61 ntBASIC2.34□□□□□ -2.03
Best1O88870 Gm29657-201ENSMUST00000189807 342 ntBASIC2.34□□□□□ -2.03
Best1O88870 Trbv7-201ENSMUST00000193339 402 ntBASIC2.34□□□□□ -2.03
Best1O88870 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC2.34□□□□□ -2.03
Best1O88870 Gm45522-201ENSMUST00000210784 166 ntBASIC2.34□□□□□ -2.03
Best1O88870 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.34□□□□□ -2.03
Best1O88870 AC154390.1-201ENSMUST00000225629 277 ntBASIC2.34□□□□□ -2.03
Best1O88870 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Best1O88870 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
Best1O88870 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Best1O88870 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
Best1O88870 Gm17113-201ENSMUST00000170118 171 ntBASIC2.33□□□□□ -2.04
Best1O88870 Gm23571-201ENSMUST00000180073 127 ntBASIC2.33□□□□□ -2.04
Best1O88870 Mir6336-201ENSMUST00000183581 130 ntBASIC2.33□□□□□ -2.04
Best1O88870 Gm27369-201ENSMUST00000185182 71 ntBASIC2.33□□□□□ -2.04
Best1O88870 Gm8031-201ENSMUST00000213430 626 ntBASIC2.33□□□□□ -2.04
Best1O88870 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC2.33□□□□□ -2.04
Best1O88870 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.33□□□□□ -2.04
Best1O88870 Gm42862-201ENSMUST00000197494 2621 ntBASIC2.32□□□□□ -2.04
Best1O88870 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Best1O88870 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC2.32□□□□□ -2.04
Best1O88870 Gm26022-201ENSMUST00000158663 108 ntBASIC2.32□□□□□ -2.04
Best1O88870 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.32□□□□□ -2.04
Best1O88870 Snora15-201ENSMUST00000177461 131 ntBASIC2.32□□□□□ -2.04
Best1O88870 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.32□□□□□ -2.04
Best1O88870 AC154636.2-201ENSMUST00000222538 161 ntBASIC2.32□□□□□ -2.04
Best1O88870 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Best1O88870 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Best1O88870 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Best1O88870 Gm12797-201ENSMUST00000118645 273 ntBASIC2.31□□□□□ -2.04
Best1O88870 Gm24436-201ENSMUST00000157889 302 ntBASIC2.31□□□□□ -2.04
Best1O88870 Gm24210-201ENSMUST00000158263 133 ntBASIC2.31□□□□□ -2.04
Best1O88870 Gm24668-201ENSMUST00000158935 104 ntBASIC2.31□□□□□ -2.04
Best1O88870 Snord87-201ENSMUST00000175437 87 ntBASIC2.31□□□□□ -2.04
Best1O88870 Mir3103-201ENSMUST00000175474 67 ntBASIC2.31□□□□□ -2.04
Best1O88870 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Best1O88870 Gm29014-201ENSMUST00000191422 326 ntBASIC2.31□□□□□ -2.04
Best1O88870 Gm37693-201ENSMUST00000194562 234 ntBASIC2.31□□□□□ -2.04
Best1O88870 Gm45013-201ENSMUST00000206883 178 ntBASIC2.31□□□□□ -2.04
Best1O88870 Gm22421-201ENSMUST00000083058 107 ntBASIC2.31□□□□□ -2.04
Best1O88870 Gm24453-201ENSMUST00000083346 76 ntBASIC2.31□□□□□ -2.04
Best1O88870 Gm25513-201ENSMUST00000083861 162 ntBASIC2.31□□□□□ -2.04
Best1O88870 Gm25628-201ENSMUST00000084002 105 ntBASIC2.31□□□□□ -2.04
Best1O88870 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Best1O88870 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.3□□□□□ -2.04
Best1O88870 Gm25529-201ENSMUST00000104850 92 ntBASIC2.3□□□□□ -2.04
Best1O88870 Gm24358-201ENSMUST00000158424 288 ntBASIC2.3□□□□□ -2.04
Best1O88870 Gm23963-201ENSMUST00000179603 77 ntBASIC2.3□□□□□ -2.04
Best1O88870 Gm5900-201ENSMUST00000179862 375 ntBASIC2.3□□□□□ -2.04
Best1O88870 Mir7068-201ENSMUST00000183439 74 ntBASIC2.3□□□□□ -2.04
Best1O88870 Gm6105-201ENSMUST00000200580 624 ntBASIC2.3□□□□□ -2.04
Best1O88870 AC160863.1-201ENSMUST00000218412 317 ntBASIC2.3□□□□□ -2.04
Best1O88870 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.3□□□□□ -2.04
Best1O88870 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms