Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Gm14491-201ENSMUST00000121919 199 ntBASIC2.39□□□□□ -2.03
Lmx1bO88609 Gm24291-201ENSMUST00000157633 162 ntBASIC2.39□□□□□ -2.03
Lmx1bO88609 Mir1951-201ENSMUST00000157981 89 ntBASIC2.39□□□□□ -2.03
Lmx1bO88609 Gm22483-201ENSMUST00000157986 274 ntBASIC2.39□□□□□ -2.03
Lmx1bO88609 Gm24358-201ENSMUST00000158424 288 ntBASIC2.39□□□□□ -2.03
Lmx1bO88609 Mir1966-201ENSMUST00000158807 108 ntBASIC2.39□□□□□ -2.03
Lmx1bO88609 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Lmx1bO88609 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Lmx1bO88609 Gm19257-201ENSMUST00000186121 183 ntBASIC2.39□□□□□ -2.03
Lmx1bO88609 Mir1291-201ENSMUST00000199842 117 ntBASIC2.39□□□□□ -2.03
Lmx1bO88609 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.39□□□□□ -2.03
Lmx1bO88609 Gm44470-201ENSMUST00000203913 142 ntBASIC2.39□□□□□ -2.03
Lmx1bO88609 Gm23239-201ENSMUST00000083006 181 ntBASIC2.39□□□□□ -2.03
Lmx1bO88609 Snora34-201ENSMUST00000083402 138 ntBASIC2.39□□□□□ -2.03
Lmx1bO88609 Gm10813-201ENSMUST00000099936 90 ntBASIC2.39□□□□□ -2.03
Lmx1bO88609 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.39□□□□□ -2.03
Lmx1bO88609 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.39□□□□□ -2.03
Lmx1bO88609 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Lmx1bO88609 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
Lmx1bO88609 Gm22782-201ENSMUST00000104082 132 ntBASIC2.38□□□□□ -2.03
Lmx1bO88609 Gm22678-201ENSMUST00000116974 101 ntBASIC2.38□□□□□ -2.03
Lmx1bO88609 Gm12213-201ENSMUST00000119924 353 ntBASIC2.38□□□□□ -2.03
Lmx1bO88609 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.38□□□□□ -2.03
Lmx1bO88609 Gm25961-201ENSMUST00000157174 135 ntBASIC2.38□□□□□ -2.03
Lmx1bO88609 Gm25267-201ENSMUST00000158522 63 ntBASIC2.38□□□□□ -2.03
Lmx1bO88609 Mir21b-201ENSMUST00000184317 108 ntBASIC2.38□□□□□ -2.03
Lmx1bO88609 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Lmx1bO88609 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.38□□□□□ -2.03
Lmx1bO88609 Gm44564-201ENSMUST00000207985 180 ntBASIC2.38□□□□□ -2.03
Lmx1bO88609 Gm19563-201ENSMUST00000222031 270 ntBASIC2.38□□□□□ -2.03
Lmx1bO88609 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.38□□□□□ -2.03
Lmx1bO88609 Gm26493-201ENSMUST00000083155 136 ntBASIC2.38□□□□□ -2.03
Lmx1bO88609 Gm23264-201ENSMUST00000083372 107 ntBASIC2.38□□□□□ -2.03
Lmx1bO88609 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.38□□□□□ -2.03
Lmx1bO88609 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Lmx1bO88609 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.37□□□□□ -2.03
Lmx1bO88609 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Lmx1bO88609 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Lmx1bO88609 Gm24670-201ENSMUST00000104154 132 ntBASIC2.37□□□□□ -2.03
Lmx1bO88609 Gm16162-201ENSMUST00000162296 297 ntBASIC2.37□□□□□ -2.03
Lmx1bO88609 Gm24082-201ENSMUST00000175175 83 ntBASIC2.37□□□□□ -2.03
Lmx1bO88609 Gm24816-201ENSMUST00000175311 151 ntBASIC2.37□□□□□ -2.03
Lmx1bO88609 Gm26337-201ENSMUST00000178000 79 ntBASIC2.37□□□□□ -2.03
Lmx1bO88609 Mir6386-201ENSMUST00000183558 104 ntBASIC2.37□□□□□ -2.03
Lmx1bO88609 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Lmx1bO88609 Gm44024-201ENSMUST00000203008 476 ntBASIC2.37□□□□□ -2.03
Lmx1bO88609 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.37□□□□□ -2.03
Lmx1bO88609 AC164086.1-201ENSMUST00000221038 289 ntBASIC2.37□□□□□ -2.03
Lmx1bO88609 Gm26458-201ENSMUST00000082832 128 ntBASIC2.37□□□□□ -2.03
Lmx1bO88609 Gm26494-201ENSMUST00000083154 143 ntBASIC2.37□□□□□ -2.03
Lmx1bO88609 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.37□□□□□ -2.03
Lmx1bO88609 Gm24493-201ENSMUST00000083805 143 ntBASIC2.37□□□□□ -2.03
Lmx1bO88609 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.37□□□□□ -2.03
Lmx1bO88609 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.37□□□□□ -2.03
Lmx1bO88609 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Lmx1bO88609 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
Lmx1bO88609 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
Lmx1bO88609 Gm24126-201ENSMUST00000104111 106 ntBASIC2.36□□□□□ -2.03
Lmx1bO88609 Gm22658-201ENSMUST00000104196 155 ntBASIC2.36□□□□□ -2.03
Lmx1bO88609 Gm22148-201ENSMUST00000104445 107 ntBASIC2.36□□□□□ -2.03
Lmx1bO88609 Snord89-201ENSMUST00000104516 110 ntBASIC2.36□□□□□ -2.03
Lmx1bO88609 Gm22486-201ENSMUST00000116815 137 ntBASIC2.36□□□□□ -2.03
Lmx1bO88609 Gm23230-201ENSMUST00000157298 133 ntBASIC2.36□□□□□ -2.03
Lmx1bO88609 Gm26403-201ENSMUST00000158500 105 ntBASIC2.36□□□□□ -2.03
Lmx1bO88609 Gm26406-201ENSMUST00000158503 124 ntBASIC2.36□□□□□ -2.03
Lmx1bO88609 Gm16546-201ENSMUST00000159442 355 ntBASIC2.36□□□□□ -2.03
Lmx1bO88609 Gm25707-201ENSMUST00000175120 96 ntBASIC2.36□□□□□ -2.03
Lmx1bO88609 Gm23922-201ENSMUST00000178792 79 ntBASIC2.36□□□□□ -2.03
Lmx1bO88609 Gm24657-201ENSMUST00000180085 79 ntBASIC2.36□□□□□ -2.03
Lmx1bO88609 Gm22996-201ENSMUST00000180236 79 ntBASIC2.36□□□□□ -2.03
Lmx1bO88609 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.36□□□□□ -2.03
Lmx1bO88609 Ighv15-1-201ENSMUST00000194450 276 ntBASIC2.36□□□□□ -2.03
Lmx1bO88609 Gm45288-201ENSMUST00000210236 151 ntBASIC2.36□□□□□ -2.03
Lmx1bO88609 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.36□□□□□ -2.03
Lmx1bO88609 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.36□□□□□ -2.03
Lmx1bO88609 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
Lmx1bO88609 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.36□□□□□ -2.03
Lmx1bO88609 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Lmx1bO88609 Mir682-201ENSMUST00000102281 96 ntBASIC2.35□□□□□ -2.03
Lmx1bO88609 Gm26293-201ENSMUST00000104170 84 ntBASIC2.35□□□□□ -2.03
Lmx1bO88609 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.35□□□□□ -2.03
Lmx1bO88609 Gm24896-201ENSMUST00000122741 135 ntBASIC2.35□□□□□ -2.03
Lmx1bO88609 Gm22557-201ENSMUST00000157804 102 ntBASIC2.35□□□□□ -2.03
Lmx1bO88609 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.35□□□□□ -2.03
Lmx1bO88609 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC2.35□□□□□ -2.03
Lmx1bO88609 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.35□□□□□ -2.03
Lmx1bO88609 Gm43991-201ENSMUST00000203751 274 ntBASIC2.35□□□□□ -2.03
Lmx1bO88609 Gm5010-201ENSMUST00000213131 260 ntBASIC2.35□□□□□ -2.03
Lmx1bO88609 CT485607.2-201ENSMUST00000214650 91 ntBASIC2.35□□□□□ -2.03
Lmx1bO88609 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
Lmx1bO88609 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Lmx1bO88609 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Lmx1bO88609 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.34□□□□□ -2.03
Lmx1bO88609 Gm26341-201ENSMUST00000104561 134 ntBASIC2.34□□□□□ -2.03
Lmx1bO88609 Gm13922-201ENSMUST00000119505 156 ntBASIC2.34□□□□□ -2.03
Lmx1bO88609 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC2.34□□□□□ -2.03
Lmx1bO88609 Gm23588-201ENSMUST00000157659 99 ntBASIC2.34□□□□□ -2.03
Lmx1bO88609 Gm24075-201ENSMUST00000158175 72 ntBASIC2.34□□□□□ -2.03
Lmx1bO88609 Gm22664-201ENSMUST00000158719 105 ntBASIC2.34□□□□□ -2.03
Lmx1bO88609 Mir28b-201ENSMUST00000175399 80 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms