Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2□□□□□ -2.09
Smarce1O54941 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Smarce1O54941 Gm14001-201ENSMUST00000118847 247 ntBASIC1.99□□□□□ -2.09
Smarce1O54941 Gm22027-201ENSMUST00000122737 127 ntBASIC1.99□□□□□ -2.09
Smarce1O54941 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.99□□□□□ -2.09
Smarce1O54941 Gm25392-201ENSMUST00000157335 297 ntBASIC1.99□□□□□ -2.09
Smarce1O54941 Gm25642-201ENSMUST00000175137 66 ntBASIC1.99□□□□□ -2.09
Smarce1O54941 Gm25994-201ENSMUST00000175392 101 ntBASIC1.99□□□□□ -2.09
Smarce1O54941 Trbv7-201ENSMUST00000193339 402 ntBASIC1.99□□□□□ -2.09
Smarce1O54941 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.99□□□□□ -2.09
Smarce1O54941 Gm10092-201ENSMUST00000077110 180 ntBASIC1.99□□□□□ -2.09
Smarce1O54941 Gm24164-201ENSMUST00000093663 104 ntBASIC1.99□□□□□ -2.09
Smarce1O54941 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Smarce1O54941 Gm24283-201ENSMUST00000104233 107 ntBASIC1.98□□□□□ -2.09
Smarce1O54941 Gm13433-201ENSMUST00000121701 240 ntBASIC1.98□□□□□ -2.09
Smarce1O54941 Gm26479-201ENSMUST00000122620 106 ntBASIC1.98□□□□□ -2.09
Smarce1O54941 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.98□□□□□ -2.09
Smarce1O54941 Gm22984-201ENSMUST00000122751 122 ntBASIC1.98□□□□□ -2.09
Smarce1O54941 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC1.98□□□□□ -2.09
Smarce1O54941 Rnu7-201ENSMUST00000158458 62 ntBASIC1.98□□□□□ -2.09
Smarce1O54941 Gm24510-201ENSMUST00000174965 94 ntBASIC1.98□□□□□ -2.09
Smarce1O54941 Gm26864-201ENSMUST00000181346 156 ntBASIC1.98□□□□□ -2.09
Smarce1O54941 Gm44491-201ENSMUST00000196794 96 ntBASIC1.98□□□□□ -2.09
Smarce1O54941 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.98□□□□□ -2.09
Smarce1O54941 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.98□□□□□ -2.09
Smarce1O54941 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.98□□□□□ -2.09
Smarce1O54941 Gm24165-201ENSMUST00000082718 128 ntBASIC1.98□□□□□ -2.09
Smarce1O54941 Gm24536-201ENSMUST00000083144 107 ntBASIC1.98□□□□□ -2.09
Smarce1O54941 Mir429-201ENSMUST00000083493 83 ntBASIC1.98□□□□□ -2.09
Smarce1O54941 Mir151-201ENSMUST00000083678 68 ntBASIC1.98□□□□□ -2.09
Smarce1O54941 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Smarce1O54941 Gm25279-201ENSMUST00000122608 133 ntBASIC1.97□□□□□ -2.09
Smarce1O54941 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Smarce1O54941 Gm22217-201ENSMUST00000157556 313 ntBASIC1.97□□□□□ -2.09
Smarce1O54941 Gm25491-201ENSMUST00000158733 308 ntBASIC1.97□□□□□ -2.09
Smarce1O54941 Gm28849-201ENSMUST00000188127 174 ntBASIC1.97□□□□□ -2.09
Smarce1O54941 Gm28330-201ENSMUST00000190353 171 ntBASIC1.97□□□□□ -2.09
Smarce1O54941 Gm45344-201ENSMUST00000211610 341 ntBASIC1.97□□□□□ -2.09
Smarce1O54941 Gm23451-201ENSMUST00000083328 122 ntBASIC1.97□□□□□ -2.09
Smarce1O54941 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.96□□□□□ -2.1
Smarce1O54941 Gm23982-201ENSMUST00000157141 106 ntBASIC1.96□□□□□ -2.1
Smarce1O54941 Mir1949-201ENSMUST00000157434 141 ntBASIC1.96□□□□□ -2.1
Smarce1O54941 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.96□□□□□ -2.1
Smarce1O54941 Gm45754-201ENSMUST00000212380 279 ntBASIC1.96□□□□□ -2.1
Smarce1O54941 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.96□□□□□ -2.1
Smarce1O54941 Snord118-201ENSMUST00000082965 135 ntBASIC1.96□□□□□ -2.1
Smarce1O54941 Snord7-201ENSMUST00000083781 97 ntBASIC1.96□□□□□ -2.1
Smarce1O54941 Gm23039-201ENSMUST00000083870 161 ntBASIC1.96□□□□□ -2.1
Smarce1O54941 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Smarce1O54941 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.95□□□□□ -2.1
Smarce1O54941 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Smarce1O54941 Gm22935-201ENSMUST00000103960 104 ntBASIC1.95□□□□□ -2.1
Smarce1O54941 Gm25875-201ENSMUST00000104323 107 ntBASIC1.95□□□□□ -2.1
Smarce1O54941 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.95□□□□□ -2.1
Smarce1O54941 Gm11388-201ENSMUST00000120908 159 ntBASIC1.95□□□□□ -2.1
Smarce1O54941 Gm24635-201ENSMUST00000122712 128 ntBASIC1.95□□□□□ -2.1
Smarce1O54941 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.95□□□□□ -2.1
Smarce1O54941 Gm9156-201ENSMUST00000189660 463 ntBASIC1.95□□□□□ -2.1
Smarce1O54941 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Smarce1O54941 AC161426.1-201ENSMUST00000214137 286 ntBASIC1.95□□□□□ -2.1
Smarce1O54941 AC165092.3-201ENSMUST00000223602 282 ntBASIC1.95□□□□□ -2.1
Smarce1O54941 Gm9795-201ENSMUST00000062156 693 ntBASIC1.95□□□□□ -2.1
Smarce1O54941 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Smarce1O54941 Gm22683-201ENSMUST00000082854 137 ntBASIC1.95□□□□□ -2.1
Smarce1O54941 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.95□□□□□ -2.1
Smarce1O54941 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Smarce1O54941 Gm23492-201ENSMUST00000116837 115 ntBASIC1.94□□□□□ -2.1
Smarce1O54941 Gm12512-201ENSMUST00000119620 217 ntBASIC1.94□□□□□ -2.1
Smarce1O54941 Gm13711-201ENSMUST00000119708 453 ntBASIC1.94□□□□□ -2.1
Smarce1O54941 Gm14922-201ENSMUST00000121131 163 ntBASIC1.94□□□□□ -2.1
Smarce1O54941 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.94□□□□□ -2.1
Smarce1O54941 Gm25371-201ENSMUST00000158162 101 ntBASIC1.94□□□□□ -2.1
Smarce1O54941 Gm22768-201ENSMUST00000158366 153 ntBASIC1.94□□□□□ -2.1
Smarce1O54941 Gm23854-201ENSMUST00000158378 108 ntBASIC1.94□□□□□ -2.1
Smarce1O54941 Gm16162-201ENSMUST00000162296 297 ntBASIC1.94□□□□□ -2.1
Smarce1O54941 Gm20477-201ENSMUST00000174028 280 ntBASIC1.94□□□□□ -2.1
Smarce1O54941 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Smarce1O54941 Mir6351-201ENSMUST00000183826 99 ntBASIC1.94□□□□□ -2.1
Smarce1O54941 Gm27747-201ENSMUST00000184707 85 ntBASIC1.94□□□□□ -2.1
Smarce1O54941 Gm28383-201ENSMUST00000187563 139 ntBASIC1.94□□□□□ -2.1
Smarce1O54941 Gm29262-201ENSMUST00000190084 196 ntBASIC1.94□□□□□ -2.1
Smarce1O54941 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.94□□□□□ -2.1
Smarce1O54941 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.94□□□□□ -2.1
Smarce1O54941 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.94□□□□□ -2.1
Smarce1O54941 Gm24966-201ENSMUST00000082443 79 ntBASIC1.94□□□□□ -2.1
Smarce1O54941 Gm26495-201ENSMUST00000083152 137 ntBASIC1.94□□□□□ -2.1
Smarce1O54941 Gm10222-201ENSMUST00000088336 294 ntBASIC1.94□□□□□ -2.1
Smarce1O54941 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
Smarce1O54941 Mir767-201ENSMUST00000103256 107 ntBASIC1.93□□□□□ -2.1
Smarce1O54941 Mir873a-201ENSMUST00000104863 77 ntBASIC1.93□□□□□ -2.1
Smarce1O54941 Gm14792-201ENSMUST00000119725 258 ntBASIC1.93□□□□□ -2.1
Smarce1O54941 Gm14883-201ENSMUST00000120179 157 ntBASIC1.93□□□□□ -2.1
Smarce1O54941 Gm15379-201ENSMUST00000121224 648 ntBASIC1.93□□□□□ -2.1
Smarce1O54941 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.93□□□□□ -2.1
Smarce1O54941 Gm24847-201ENSMUST00000158032 108 ntBASIC1.93□□□□□ -2.1
Smarce1O54941 Gm24277-201ENSMUST00000158661 104 ntBASIC1.93□□□□□ -2.1
Smarce1O54941 Gm22665-201ENSMUST00000158720 275 ntBASIC1.93□□□□□ -2.1
Smarce1O54941 Gm27248-201ENSMUST00000184004 166 ntBASIC1.93□□□□□ -2.1
Smarce1O54941 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC1.93□□□□□ -2.1
Smarce1O54941 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.93□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 265 ms