Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm14946-201ENSMUST00000119859 296 ntBASIC0.18□□□□□ -2.38
Hmgb3O54879 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.18□□□□□ -2.38
Hmgb3O54879 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC0.18□□□□□ -2.38
Hmgb3O54879 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC0.18□□□□□ -2.38
Hmgb3O54879 Gm22143-201ENSMUST00000157401 203 ntBASIC0.18□□□□□ -2.38
Hmgb3O54879 Gm22851-201ENSMUST00000178741 94 ntBASIC0.18□□□□□ -2.38
Hmgb3O54879 Gm25074-201ENSMUST00000178782 94 ntBASIC0.18□□□□□ -2.38
Hmgb3O54879 Mir6240-201ENSMUST00000184281 117 ntBASIC0.18□□□□□ -2.38
Hmgb3O54879 Gm27817-201ENSMUST00000184302 233 ntBASIC0.18□□□□□ -2.38
Hmgb3O54879 Mir468-201ENSMUST00000197332 78 ntBASIC0.18□□□□□ -2.38
Hmgb3O54879 Gm45315-201ENSMUST00000209283 333 ntBASIC0.18□□□□□ -2.38
Hmgb3O54879 AC116589.9-201ENSMUST00000221462 908 ntBASIC0.18□□□□□ -2.38
Hmgb3O54879 Gm23055-201ENSMUST00000082805 94 ntBASIC0.18□□□□□ -2.38
Hmgb3O54879 Mir155-201ENSMUST00000083463 65 ntBASIC0.18□□□□□ -2.38
Hmgb3O54879 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC0.18□□□□□ -2.38
Hmgb3O54879 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.18□□□□□ -2.38
Hmgb3O54879 Gm26278-201ENSMUST00000157098 132 ntBASIC0.17□□□□□ -2.38
Hmgb3O54879 Gm9593-201ENSMUST00000166034 469 ntBASIC0.17□□□□□ -2.38
Hmgb3O54879 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC0.17□□□□□ -2.38
Hmgb3O54879 Gm23714-201ENSMUST00000179259 105 ntBASIC0.17□□□□□ -2.38
Hmgb3O54879 Gm25121-201ENSMUST00000179846 79 ntBASIC0.17□□□□□ -2.38
Hmgb3O54879 Gm27313-201ENSMUST00000183500 142 ntBASIC0.17□□□□□ -2.38
Hmgb3O54879 Gm27894-201ENSMUST00000184177 92 ntBASIC0.17□□□□□ -2.38
Hmgb3O54879 AC153141.1-201ENSMUST00000218636 501 ntBASIC0.17□□□□□ -2.38
Hmgb3O54879 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.17□□□□□ -2.38
Hmgb3O54879 AC117656.1-201ENSMUST00000225826 339 ntBASIC0.17□□□□□ -2.38
Hmgb3O54879 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC0.17□□□□□ -2.38
Hmgb3O54879 Gm12143-201ENSMUST00000119666 332 ntBASIC0.16□□□□□ -2.38
Hmgb3O54879 Gm23996-201ENSMUST00000158062 131 ntBASIC0.16□□□□□ -2.38
Hmgb3O54879 Gm22983-201ENSMUST00000158308 104 ntBASIC0.16□□□□□ -2.38
Hmgb3O54879 Gm24111-201ENSMUST00000175491 97 ntBASIC0.16□□□□□ -2.38
Hmgb3O54879 Gm27717-201ENSMUST00000183933 151 ntBASIC0.16□□□□□ -2.38
Hmgb3O54879 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC0.16□□□□□ -2.38
Hmgb3O54879 Gm44488-201ENSMUST00000199467 119 ntBASIC0.16□□□□□ -2.38
Hmgb3O54879 Gm44828-201ENSMUST00000203745 106 ntBASIC0.16□□□□□ -2.38
Hmgb3O54879 Gm45815-201ENSMUST00000220241 146 ntBASIC0.16□□□□□ -2.38
Hmgb3O54879 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC0.16□□□□□ -2.38
Hmgb3O54879 Gm25582-201ENSMUST00000083412 110 ntBASIC0.16□□□□□ -2.38
Hmgb3O54879 Gm20541-201ENSMUST00000173035 1406 ntBASIC0.15□□□□□ -2.39
Hmgb3O54879 Gm22591-201ENSMUST00000104243 106 ntBASIC0.15□□□□□ -2.39
Hmgb3O54879 Defb44-ps-201ENSMUST00000126871 219 ntBASIC0.15□□□□□ -2.39
Hmgb3O54879 Mir6365-201ENSMUST00000183990 101 ntBASIC0.15□□□□□ -2.39
Hmgb3O54879 Gm37918-201ENSMUST00000192071 120 ntBASIC0.15□□□□□ -2.39
Hmgb3O54879 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC0.15□□□□□ -2.39
Hmgb3O54879 AC125167.1-201ENSMUST00000198698 141 ntBASIC0.15□□□□□ -2.39
Hmgb3O54879 Gm43220-201ENSMUST00000199299 282 ntBASIC0.15□□□□□ -2.39
Hmgb3O54879 Gm17906-201ENSMUST00000202480 901 ntBASIC0.15□□□□□ -2.39
Hmgb3O54879 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC0.15□□□□□ -2.39
Hmgb3O54879 Gm33654-201ENSMUST00000221704 215 ntBASIC0.15□□□□□ -2.39
Hmgb3O54879 AC173345.2-201ENSMUST00000222795 153 ntBASIC0.15□□□□□ -2.39
Hmgb3O54879 AC164297.3-201ENSMUST00000224238 94 ntBASIC0.15□□□□□ -2.39
Hmgb3O54879 AC183092.1-201ENSMUST00000224301 153 ntBASIC0.15□□□□□ -2.39
Hmgb3O54879 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
Hmgb3O54879 Mir324-201ENSMUST00000083600 89 ntBASIC0.15□□□□□ -2.39
Hmgb3O54879 Mir16-2-201ENSMUST00000083672 95 ntBASIC0.15□□□□□ -2.39
Hmgb3O54879 Mir490-201ENSMUST00000093567 84 ntBASIC0.15□□□□□ -2.39
Hmgb3O54879 Gm24163-201ENSMUST00000093660 132 ntBASIC0.15□□□□□ -2.39
Hmgb3O54879 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
Hmgb3O54879 Mir1961-201ENSMUST00000158643 112 ntBASIC0.14□□□□□ -2.39
Hmgb3O54879 Gm27475-201ENSMUST00000183420 61 ntBASIC0.14□□□□□ -2.39
Hmgb3O54879 Mir7065-201ENSMUST00000185110 61 ntBASIC0.14□□□□□ -2.39
Hmgb3O54879 Gm37997-201ENSMUST00000193515 267 ntBASIC0.14□□□□□ -2.39
Hmgb3O54879 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.14□□□□□ -2.39
Hmgb3O54879 Gm22809-201ENSMUST00000082743 156 ntBASIC0.14□□□□□ -2.39
Hmgb3O54879 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC0.13□□□□□ -2.39
Hmgb3O54879 Mir872-201ENSMUST00000104728 81 ntBASIC0.13□□□□□ -2.39
Hmgb3O54879 Gm14761-201ENSMUST00000121363 262 ntBASIC0.13□□□□□ -2.39
Hmgb3O54879 Gm24191-201ENSMUST00000157977 122 ntBASIC0.13□□□□□ -2.39
Hmgb3O54879 Mir1954-201ENSMUST00000175595 86 ntBASIC0.13□□□□□ -2.39
Hmgb3O54879 Snord116l12-201ENSMUST00000179816 94 ntBASIC0.13□□□□□ -2.39
Hmgb3O54879 Snord68-201ENSMUST00000082516 86 ntBASIC0.13□□□□□ -2.39
Hmgb3O54879 Gm26066-201ENSMUST00000083385 109 ntBASIC0.13□□□□□ -2.39
Hmgb3O54879 Gm22743-201ENSMUST00000083445 133 ntBASIC0.13□□□□□ -2.39
Hmgb3O54879 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.13□□□□□ -2.39
Hmgb3O54879 Gm13577-201ENSMUST00000121365 205 ntBASIC0.12□□□□□ -2.39
Hmgb3O54879 Gm11254-201ENSMUST00000122368 653 ntBASIC0.12□□□□□ -2.39
Hmgb3O54879 Gm24277-201ENSMUST00000158661 104 ntBASIC0.12□□□□□ -2.39
Hmgb3O54879 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
Hmgb3O54879 Gm28926-201ENSMUST00000191063 680 ntBASIC0.12□□□□□ -2.39
Hmgb3O54879 Gm36953-201ENSMUST00000195295 268 ntBASIC0.12□□□□□ -2.39
Hmgb3O54879 Gm44211-201ENSMUST00000204867 145 ntBASIC0.12□□□□□ -2.39
Hmgb3O54879 AC157476.1-201ENSMUST00000215555 169 ntBASIC0.12□□□□□ -2.39
Hmgb3O54879 AC154636.2-201ENSMUST00000222538 161 ntBASIC0.12□□□□□ -2.39
Hmgb3O54879 AC162934.3-201ENSMUST00000223015 841 ntBASIC0.12□□□□□ -2.39
Hmgb3O54879 Gm30155-201ENSMUST00000223458 339 ntBASIC0.12□□□□□ -2.39
Hmgb3O54879 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
Hmgb3O54879 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
Hmgb3O54879 Gm25783-201ENSMUST00000122525 190 ntBASIC0.11□□□□□ -2.39
Hmgb3O54879 Gm28992-201ENSMUST00000190534 139 ntBASIC0.11□□□□□ -2.39
Hmgb3O54879 AC122905.2-201ENSMUST00000220325 269 ntBASIC0.11□□□□□ -2.39
Hmgb3O54879 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.1□□□□□ -2.39
Hmgb3O54879 Gm26301-201ENSMUST00000104813 95 ntBASIC0.1□□□□□ -2.39
Hmgb3O54879 Gm14296-202ENSMUST00000108931 750 ntBASIC0.1□□□□□ -2.39
Hmgb3O54879 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC0.1□□□□□ -2.39
Hmgb3O54879 Gm11856-201ENSMUST00000118712 276 ntBASIC0.1□□□□□ -2.39
Hmgb3O54879 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC0.1□□□□□ -2.39
Hmgb3O54879 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
Hmgb3O54879 Gm23557-201ENSMUST00000157820 138 ntBASIC0.1□□□□□ -2.39
Hmgb3O54879 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC0.1□□□□□ -2.39
Hmgb3O54879 Gm26285-201ENSMUST00000177923 107 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms