Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm25404-201ENSMUST00000082970 107 ntBASIC0.37□□□□□ -2.35
Sdc4O35988 Gm25896-201ENSMUST00000083713 136 ntBASIC0.37□□□□□ -2.35
Sdc4O35988 Gm25650-201ENSMUST00000083784 162 ntBASIC0.37□□□□□ -2.35
Sdc4O35988 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
Sdc4O35988 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC0.37□□□□□ -2.35
Sdc4O35988 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.37□□□□□ -2.35
Sdc4O35988 AC164297.1-201ENSMUST00000224484 1561 ntBASIC0.36□□□□□ -2.35
Sdc4O35988 Gm24338-201ENSMUST00000104205 127 ntBASIC0.36□□□□□ -2.35
Sdc4O35988 Gm11862-201ENSMUST00000119678 659 ntBASIC0.36□□□□□ -2.35
Sdc4O35988 Gm14761-201ENSMUST00000121363 262 ntBASIC0.36□□□□□ -2.35
Sdc4O35988 Gm24517-201ENSMUST00000122560 107 ntBASIC0.36□□□□□ -2.35
Sdc4O35988 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
Sdc4O35988 Gm26278-201ENSMUST00000157098 132 ntBASIC0.36□□□□□ -2.35
Sdc4O35988 Gm26116-201ENSMUST00000175600 77 ntBASIC0.36□□□□□ -2.35
Sdc4O35988 Gm28921-201ENSMUST00000190219 378 ntBASIC0.36□□□□□ -2.35
Sdc4O35988 Gm37869-201ENSMUST00000193385 595 ntBASIC0.36□□□□□ -2.35
Sdc4O35988 AC130821.1-201ENSMUST00000221997 293 ntBASIC0.36□□□□□ -2.35
Sdc4O35988 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.36□□□□□ -2.35
Sdc4O35988 AC117656.1-201ENSMUST00000225826 339 ntBASIC0.36□□□□□ -2.35
Sdc4O35988 AC102369.2-201ENSMUST00000219725 1679 ntBASIC0.36□□□□□ -2.35
Sdc4O35988 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
Sdc4O35988 Gm25787-201ENSMUST00000104709 92 ntBASIC0.35□□□□□ -2.35
Sdc4O35988 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
Sdc4O35988 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC0.35□□□□□ -2.35
Sdc4O35988 Gm25884-201ENSMUST00000157782 62 ntBASIC0.35□□□□□ -2.35
Sdc4O35988 Gm25633-201ENSMUST00000178565 107 ntBASIC0.35□□□□□ -2.35
Sdc4O35988 Gm42719-201ENSMUST00000197393 355 ntBASIC0.35□□□□□ -2.35
Sdc4O35988 Gm43810-201ENSMUST00000201018 232 ntBASIC0.35□□□□□ -2.35
Sdc4O35988 AC192616.3-201ENSMUST00000220797 1124 ntBASIC0.35□□□□□ -2.35
Sdc4O35988 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.35□□□□□ -2.35
Sdc4O35988 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.35□□□□□ -2.35
Sdc4O35988 AC156790.3-201ENSMUST00000226200 254 ntBASIC0.35□□□□□ -2.35
Sdc4O35988 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
Sdc4O35988 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
Sdc4O35988 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC0.34□□□□□ -2.36
Sdc4O35988 Gm23130-201ENSMUST00000104252 74 ntBASIC0.34□□□□□ -2.36
Sdc4O35988 Gm26303-201ENSMUST00000116845 119 ntBASIC0.34□□□□□ -2.36
Sdc4O35988 Gm11794-201ENSMUST00000119446 237 ntBASIC0.34□□□□□ -2.36
Sdc4O35988 Gm14922-201ENSMUST00000121131 163 ntBASIC0.34□□□□□ -2.36
Sdc4O35988 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.34□□□□□ -2.36
Sdc4O35988 Defb44-ps-201ENSMUST00000126871 219 ntBASIC0.34□□□□□ -2.36
Sdc4O35988 Gm26149-201ENSMUST00000157432 108 ntBASIC0.34□□□□□ -2.36
Sdc4O35988 Gm22522-201ENSMUST00000158271 151 ntBASIC0.34□□□□□ -2.36
Sdc4O35988 Gm20541-201ENSMUST00000173035 1406 ntBASIC0.34□□□□□ -2.36
Sdc4O35988 Gm25750-201ENSMUST00000175483 112 ntBASIC0.34□□□□□ -2.36
Sdc4O35988 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC0.34□□□□□ -2.36
Sdc4O35988 Gm27659-201ENSMUST00000183472 98 ntBASIC0.34□□□□□ -2.36
Sdc4O35988 Gm28435-201ENSMUST00000185496 108 ntBASIC0.34□□□□□ -2.36
Sdc4O35988 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC0.34□□□□□ -2.36
Sdc4O35988 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC0.34□□□□□ -2.36
Sdc4O35988 AC124346.1-201ENSMUST00000218539 364 ntBASIC0.34□□□□□ -2.36
Sdc4O35988 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.34□□□□□ -2.36
Sdc4O35988 Mir16-2-201ENSMUST00000083672 95 ntBASIC0.34□□□□□ -2.36
Sdc4O35988 Gm24261-201ENSMUST00000083744 104 ntBASIC0.34□□□□□ -2.36
Sdc4O35988 Gm23347-201ENSMUST00000083823 82 ntBASIC0.34□□□□□ -2.36
Sdc4O35988 Gm25513-201ENSMUST00000083861 162 ntBASIC0.34□□□□□ -2.36
Sdc4O35988 Gm37642-201ENSMUST00000193166 1735 ntBASIC0.33□□□□□ -2.36
Sdc4O35988 Mir465c-2-201ENSMUST00000104757 81 ntBASIC0.33□□□□□ -2.36
Sdc4O35988 Gm11512-201ENSMUST00000119669 663 ntBASIC0.33□□□□□ -2.36
Sdc4O35988 Gm25054-201ENSMUST00000157370 97 ntBASIC0.33□□□□□ -2.36
Sdc4O35988 Gm23352-201ENSMUST00000158428 64 ntBASIC0.33□□□□□ -2.36
Sdc4O35988 Gm24678-201ENSMUST00000158756 104 ntBASIC0.33□□□□□ -2.36
Sdc4O35988 Gm25643-201ENSMUST00000158874 103 ntBASIC0.33□□□□□ -2.36
Sdc4O35988 Gm21894-201ENSMUST00000179631 546 ntBASIC0.33□□□□□ -2.36
Sdc4O35988 Gm25253-201ENSMUST00000179958 107 ntBASIC0.33□□□□□ -2.36
Sdc4O35988 Gm43513-201ENSMUST00000199779 1076 ntBASIC0.33□□□□□ -2.36
Sdc4O35988 Gm29817-201ENSMUST00000210098 172 ntBASIC0.33□□□□□ -2.36
Sdc4O35988 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.33□□□□□ -2.36
Sdc4O35988 AC126554.1-201ENSMUST00000222161 271 ntBASIC0.33□□□□□ -2.36
Sdc4O35988 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
Sdc4O35988 Gm23969-201ENSMUST00000083324 74 ntBASIC0.33□□□□□ -2.36
Sdc4O35988 Mir155-201ENSMUST00000083463 65 ntBASIC0.33□□□□□ -2.36
Sdc4O35988 Mir465c-1-201ENSMUST00000093560 81 ntBASIC0.33□□□□□ -2.36
Sdc4O35988 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC0.32□□□□□ -2.36
Sdc4O35988 Gm23111-201ENSMUST00000122652 105 ntBASIC0.32□□□□□ -2.36
Sdc4O35988 Gm22796-201ENSMUST00000157234 106 ntBASIC0.32□□□□□ -2.36
Sdc4O35988 Gm23523-201ENSMUST00000180190 107 ntBASIC0.32□□□□□ -2.36
Sdc4O35988 Mir6364-201ENSMUST00000183396 86 ntBASIC0.32□□□□□ -2.36
Sdc4O35988 Gm28848-201ENSMUST00000189984 168 ntBASIC0.32□□□□□ -2.36
Sdc4O35988 Gm37438-201ENSMUST00000192813 393 ntBASIC0.32□□□□□ -2.36
Sdc4O35988 AC125167.1-201ENSMUST00000198698 141 ntBASIC0.32□□□□□ -2.36
Sdc4O35988 Gm44142-201ENSMUST00000203358 311 ntBASIC0.32□□□□□ -2.36
Sdc4O35988 AC162934.3-201ENSMUST00000223015 841 ntBASIC0.32□□□□□ -2.36
Sdc4O35988 Gm24038-201ENSMUST00000082872 159 ntBASIC0.32□□□□□ -2.36
Sdc4O35988 Gm25138-201ENSMUST00000083248 136 ntBASIC0.32□□□□□ -2.36
Sdc4O35988 Gm22935-201ENSMUST00000103960 104 ntBASIC0.31□□□□□ -2.36
Sdc4O35988 Gm24555-201ENSMUST00000104548 124 ntBASIC0.31□□□□□ -2.36
Sdc4O35988 Gm22281-201ENSMUST00000157198 103 ntBASIC0.31□□□□□ -2.36
Sdc4O35988 Snord116l12-201ENSMUST00000179816 94 ntBASIC0.31□□□□□ -2.36
Sdc4O35988 Mir195b-201ENSMUST00000184814 97 ntBASIC0.31□□□□□ -2.36
Sdc4O35988 Gm28917-201ENSMUST00000187294 237 ntBASIC0.31□□□□□ -2.36
Sdc4O35988 Gm28766-201ENSMUST00000191086 234 ntBASIC0.31□□□□□ -2.36
Sdc4O35988 Gm44462-201ENSMUST00000199696 129 ntBASIC0.31□□□□□ -2.36
Sdc4O35988 Gm44976-201ENSMUST00000205543 261 ntBASIC0.31□□□□□ -2.36
Sdc4O35988 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC0.31□□□□□ -2.36
Sdc4O35988 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC0.31□□□□□ -2.36
Sdc4O35988 AC098718.1-201ENSMUST00000226166 175 ntBASIC0.31□□□□□ -2.36
Sdc4O35988 Gm23093-201ENSMUST00000083450 102 ntBASIC0.31□□□□□ -2.36
Sdc4O35988 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
Sdc4O35988 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.3□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms