Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Gm25113-201ENSMUST00000157185 143 ntBASIC2.24□□□□□ -2.05
Capn1O35350 Gm23219-201ENSMUST00000158123 87 ntBASIC2.24□□□□□ -2.05
Capn1O35350 Gm24006-201ENSMUST00000158462 132 ntBASIC2.24□□□□□ -2.05
Capn1O35350 Gm22075-201ENSMUST00000158599 192 ntBASIC2.24□□□□□ -2.05
Capn1O35350 Gm19123-201ENSMUST00000190716 651 ntBASIC2.24□□□□□ -2.05
Capn1O35350 Gm43865-201ENSMUST00000204721 127 ntBASIC2.24□□□□□ -2.05
Capn1O35350 AC132615.1-201ENSMUST00000213873 255 ntBASIC2.24□□□□□ -2.05
Capn1O35350 AC154390.1-201ENSMUST00000225629 277 ntBASIC2.24□□□□□ -2.05
Capn1O35350 Snora33-201ENSMUST00000093556 129 ntBASIC2.24□□□□□ -2.05
Capn1O35350 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
Capn1O35350 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Capn1O35350 Gm25485-201ENSMUST00000104120 132 ntBASIC2.23□□□□□ -2.05
Capn1O35350 Gm24835-201ENSMUST00000116777 111 ntBASIC2.23□□□□□ -2.05
Capn1O35350 Gm13756-201ENSMUST00000117618 222 ntBASIC2.23□□□□□ -2.05
Capn1O35350 Gm24594-201ENSMUST00000122502 99 ntBASIC2.23□□□□□ -2.05
Capn1O35350 Gm24385-201ENSMUST00000122694 350 ntBASIC2.23□□□□□ -2.05
Capn1O35350 Gm23980-201ENSMUST00000157135 158 ntBASIC2.23□□□□□ -2.05
Capn1O35350 Gm25866-201ENSMUST00000158245 112 ntBASIC2.23□□□□□ -2.05
Capn1O35350 Gm22664-201ENSMUST00000158719 105 ntBASIC2.23□□□□□ -2.05
Capn1O35350 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Capn1O35350 Gm27369-201ENSMUST00000185182 71 ntBASIC2.23□□□□□ -2.05
Capn1O35350 AC125167.1-201ENSMUST00000198698 141 ntBASIC2.23□□□□□ -2.05
Capn1O35350 AC159896.1-201ENSMUST00000215264 215 ntBASIC2.23□□□□□ -2.05
Capn1O35350 AC173482.5-201ENSMUST00000224181 327 ntBASIC2.23□□□□□ -2.05
Capn1O35350 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.23□□□□□ -2.05
Capn1O35350 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Capn1O35350 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Capn1O35350 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Capn1O35350 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Capn1O35350 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Capn1O35350 Gm14846-201ENSMUST00000121868 216 ntBASIC2.22□□□□□ -2.05
Capn1O35350 Gm23600-201ENSMUST00000157260 71 ntBASIC2.22□□□□□ -2.05
Capn1O35350 Gm22227-201ENSMUST00000157356 259 ntBASIC2.22□□□□□ -2.05
Capn1O35350 Gm23536-201ENSMUST00000157541 134 ntBASIC2.22□□□□□ -2.05
Capn1O35350 Gm24392-201ENSMUST00000158136 103 ntBASIC2.22□□□□□ -2.05
Capn1O35350 Gm24667-201ENSMUST00000158938 103 ntBASIC2.22□□□□□ -2.05
Capn1O35350 Gm28912-201ENSMUST00000189001 234 ntBASIC2.22□□□□□ -2.05
Capn1O35350 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.22□□□□□ -2.05
Capn1O35350 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC2.22□□□□□ -2.05
Capn1O35350 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.22□□□□□ -2.05
Capn1O35350 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.22□□□□□ -2.05
Capn1O35350 Gm24453-201ENSMUST00000083346 76 ntBASIC2.22□□□□□ -2.05
Capn1O35350 Mir181b-2-201ENSMUST00000083644 89 ntBASIC2.22□□□□□ -2.05
Capn1O35350 Mir107-201ENSMUST00000083660 87 ntBASIC2.22□□□□□ -2.05
Capn1O35350 Gm14491-201ENSMUST00000121919 199 ntBASIC2.21□□□□□ -2.06
Capn1O35350 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.21□□□□□ -2.06
Capn1O35350 Gm22011-201ENSMUST00000158790 123 ntBASIC2.21□□□□□ -2.06
Capn1O35350 Gm20477-201ENSMUST00000174028 280 ntBASIC2.21□□□□□ -2.06
Capn1O35350 Gm24412-201ENSMUST00000083426 109 ntBASIC2.21□□□□□ -2.06
Capn1O35350 Mir301-201ENSMUST00000083655 86 ntBASIC2.21□□□□□ -2.06
Capn1O35350 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Capn1O35350 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Capn1O35350 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Capn1O35350 Gm22097-201ENSMUST00000157929 278 ntBASIC2.2□□□□□ -2.06
Capn1O35350 Gm24210-201ENSMUST00000158263 133 ntBASIC2.2□□□□□ -2.06
Capn1O35350 Gm25615-201ENSMUST00000177836 94 ntBASIC2.2□□□□□ -2.06
Capn1O35350 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.2□□□□□ -2.06
Capn1O35350 Mir6336-201ENSMUST00000183581 130 ntBASIC2.2□□□□□ -2.06
Capn1O35350 Mir6925-201ENSMUST00000197857 70 ntBASIC2.2□□□□□ -2.06
Capn1O35350 Gm43626-201ENSMUST00000198575 162 ntBASIC2.2□□□□□ -2.06
Capn1O35350 Gm45907-201ENSMUST00000213023 193 ntBASIC2.2□□□□□ -2.06
Capn1O35350 AC153964.2-201ENSMUST00000217704 2474 ntBASIC2.19□□□□□ -2.06
Capn1O35350 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.19□□□□□ -2.06
Capn1O35350 Gm26015-201ENSMUST00000104402 125 ntBASIC2.19□□□□□ -2.06
Capn1O35350 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Capn1O35350 Gm22666-201ENSMUST00000158717 164 ntBASIC2.19□□□□□ -2.06
Capn1O35350 Gm27421-201ENSMUST00000184729 167 ntBASIC2.19□□□□□ -2.06
Capn1O35350 Mir7232-201ENSMUST00000197929 74 ntBASIC2.19□□□□□ -2.06
Capn1O35350 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Capn1O35350 Gm35736-201ENSMUST00000203681 313 ntBASIC2.19□□□□□ -2.06
Capn1O35350 Gm22421-201ENSMUST00000083058 107 ntBASIC2.19□□□□□ -2.06
Capn1O35350 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
Capn1O35350 Gm24212-201ENSMUST00000158258 132 ntBASIC2.18□□□□□ -2.06
Capn1O35350 Gm25658-201ENSMUST00000158472 128 ntBASIC2.18□□□□□ -2.06
Capn1O35350 Gm22947-201ENSMUST00000158559 91 ntBASIC2.18□□□□□ -2.06
Capn1O35350 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.18□□□□□ -2.06
Capn1O35350 Snora15-201ENSMUST00000177461 131 ntBASIC2.18□□□□□ -2.06
Capn1O35350 Mir6388-201ENSMUST00000184417 75 ntBASIC2.18□□□□□ -2.06
Capn1O35350 Gm29014-201ENSMUST00000191422 326 ntBASIC2.18□□□□□ -2.06
Capn1O35350 Gm43722-201ENSMUST00000196054 124 ntBASIC2.18□□□□□ -2.06
Capn1O35350 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
Capn1O35350 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Capn1O35350 Mir1951-201ENSMUST00000157981 89 ntBASIC2.17□□□□□ -2.06
Capn1O35350 Mir1927-201ENSMUST00000158579 109 ntBASIC2.17□□□□□ -2.06
Capn1O35350 Gm23194-201ENSMUST00000158813 105 ntBASIC2.17□□□□□ -2.06
Capn1O35350 Snord87-201ENSMUST00000175437 87 ntBASIC2.17□□□□□ -2.06
Capn1O35350 Gm23977-201ENSMUST00000177871 74 ntBASIC2.17□□□□□ -2.06
Capn1O35350 Gm23571-201ENSMUST00000180073 127 ntBASIC2.17□□□□□ -2.06
Capn1O35350 Gm27399-201ENSMUST00000184250 78 ntBASIC2.17□□□□□ -2.06
Capn1O35350 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC2.17□□□□□ -2.06
Capn1O35350 AC157476.1-201ENSMUST00000215555 169 ntBASIC2.17□□□□□ -2.06
Capn1O35350 AC165293.1-201ENSMUST00000219669 329 ntBASIC2.17□□□□□ -2.06
Capn1O35350 Gm24042-201ENSMUST00000083114 103 ntBASIC2.17□□□□□ -2.06
Capn1O35350 Rny1-201ENSMUST00000083767 112 ntBASIC2.17□□□□□ -2.06
Capn1O35350 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.17□□□□□ -2.06
Capn1O35350 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.17□□□□□ -2.06
Capn1O35350 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
Capn1O35350 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
Capn1O35350 Gm3852-201ENSMUST00000182781 264 ntBASIC2.16□□□□□ -2.06
Capn1O35350 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 106.2 ms