Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 Gm23944-201ENSMUST00000178607 79 ntBASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Gm26283-201ENSMUST00000178625 79 ntBASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Gm25452-201ENSMUST00000178776 79 ntBASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Gm23286-201ENSMUST00000178963 79 ntBASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Gm22640-201ENSMUST00000179035 79 ntBASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Gm25984-201ENSMUST00000179129 79 ntBASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Gm25585-201ENSMUST00000179469 79 ntBASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Gm26374-201ENSMUST00000179737 79 ntBASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Gm24040-201ENSMUST00000179786 79 ntBASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Gm25017-201ENSMUST00000179805 79 ntBASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Gm23618-201ENSMUST00000179912 79 ntBASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Gm26284-201ENSMUST00000180107 79 ntBASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Gm24570-201ENSMUST00000180314 79 ntBASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Gm24654-201ENSMUST00000180315 79 ntBASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Gm27374-201ENSMUST00000183660 81 ntBASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Gm43602-201ENSMUST00000196772 300 ntBASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Gm43898-201ENSMUST00000204456 424 ntBASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Gm44057-201ENSMUST00000204547 96 ntBASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Gm44399-201ENSMUST00000205043 226 ntBASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Gm22249-201ENSMUST00000082485 136 ntBASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Gm25130-201ENSMUST00000082650 156 ntBASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Ccdc9bA3KGF9 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Ccdc9bA3KGF9 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Ccdc9bA3KGF9 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Ccdc9bA3KGF9 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC3.01□□□□□ -1.93
Ccdc9bA3KGF9 Gm25882-201ENSMUST00000157784 85 ntBASIC3.01□□□□□ -1.93
Ccdc9bA3KGF9 Gm23380-201ENSMUST00000158448 103 ntBASIC3.01□□□□□ -1.93
Ccdc9bA3KGF9 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.01□□□□□ -1.93
Ccdc9bA3KGF9 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC3.01□□□□□ -1.93
Ccdc9bA3KGF9 Gm25513-201ENSMUST00000083861 162 ntBASIC3.01□□□□□ -1.93
Ccdc9bA3KGF9 Gm14387-201ENSMUST00000121827 2055 ntBASIC3□□□□□ -1.93
Ccdc9bA3KGF9 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
Ccdc9bA3KGF9 Gm6954-201ENSMUST00000117416 225 ntBASIC3□□□□□ -1.93
Ccdc9bA3KGF9 Gm24936-201ENSMUST00000122598 247 ntBASIC3□□□□□ -1.93
Ccdc9bA3KGF9 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC3□□□□□ -1.93
Ccdc9bA3KGF9 Gm22946-201ENSMUST00000158558 82 ntBASIC3□□□□□ -1.93
Ccdc9bA3KGF9 Mir1927-201ENSMUST00000158579 109 ntBASIC3□□□□□ -1.93
Ccdc9bA3KGF9 Gm26214-201ENSMUST00000158581 107 ntBASIC3□□□□□ -1.93
Ccdc9bA3KGF9 Gm23775-201ENSMUST00000158991 249 ntBASIC3□□□□□ -1.93
Ccdc9bA3KGF9 Mir6916-201ENSMUST00000184514 63 ntBASIC3□□□□□ -1.93
Ccdc9bA3KGF9 Gm18665-201ENSMUST00000189783 270 ntBASIC3□□□□□ -1.93
Ccdc9bA3KGF9 Gm42719-201ENSMUST00000197393 355 ntBASIC3□□□□□ -1.93
Ccdc9bA3KGF9 Mir201-201ENSMUST00000083470 66 ntBASIC3□□□□□ -1.93
Ccdc9bA3KGF9 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3□□□□□ -1.93
Ccdc9bA3KGF9 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Ccdc9bA3KGF9 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Ccdc9bA3KGF9 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Ccdc9bA3KGF9 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC2.99□□□□□ -1.93
Ccdc9bA3KGF9 Gm18337-201ENSMUST00000219023 5762 ntBASIC2.99□□□□□ -1.93
Ccdc9bA3KGF9 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
Ccdc9bA3KGF9 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Ccdc9bA3KGF9 Gm22750-201ENSMUST00000102076 103 ntBASIC2.99□□□□□ -1.93
Ccdc9bA3KGF9 Mir693-201ENSMUST00000102187 89 ntBASIC2.99□□□□□ -1.93
Ccdc9bA3KGF9 Gm24890-201ENSMUST00000104389 102 ntBASIC2.99□□□□□ -1.93
Ccdc9bA3KGF9 Mir1195-201ENSMUST00000116818 98 ntBASIC2.99□□□□□ -1.93
Ccdc9bA3KGF9 Gm12954-201ENSMUST00000118610 611 ntBASIC2.99□□□□□ -1.93
Ccdc9bA3KGF9 Gm15067-201ENSMUST00000119534 156 ntBASIC2.99□□□□□ -1.93
Ccdc9bA3KGF9 Gm24916-201ENSMUST00000157287 79 ntBASIC2.99□□□□□ -1.93
Ccdc9bA3KGF9 Mir3103-201ENSMUST00000175474 67 ntBASIC2.99□□□□□ -1.93
Ccdc9bA3KGF9 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.99□□□□□ -1.93
Ccdc9bA3KGF9 Gm23303-201ENSMUST00000082714 152 ntBASIC2.99□□□□□ -1.93
Ccdc9bA3KGF9 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.99□□□□□ -1.93
Ccdc9bA3KGF9 Gm37158-201ENSMUST00000191652 5704 ntBASIC2.99□□□□□ -1.93
Ccdc9bA3KGF9 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Ccdc9bA3KGF9 Gm12025-201ENSMUST00000117768 144 ntBASIC2.98□□□□□ -1.93
Ccdc9bA3KGF9 Gm23671-201ENSMUST00000157472 103 ntBASIC2.98□□□□□ -1.93
Ccdc9bA3KGF9 Gm23504-201ENSMUST00000158988 95 ntBASIC2.98□□□□□ -1.93
Ccdc9bA3KGF9 Gm27672-201ENSMUST00000183751 204 ntBASIC2.98□□□□□ -1.93
Ccdc9bA3KGF9 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Ccdc9bA3KGF9 Gm23615-201ENSMUST00000082602 65 ntBASIC2.98□□□□□ -1.93
Ccdc9bA3KGF9 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
Ccdc9bA3KGF9 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Ccdc9bA3KGF9 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Ccdc9bA3KGF9 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Ccdc9bA3KGF9 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Ccdc9bA3KGF9 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Ccdc9bA3KGF9 Gm24234-201ENSMUST00000104316 107 ntBASIC2.97□□□□□ -1.93
Ccdc9bA3KGF9 Gm14567-201ENSMUST00000117155 174 ntBASIC2.97□□□□□ -1.93
Ccdc9bA3KGF9 Gm11253-201ENSMUST00000118486 201 ntBASIC2.97□□□□□ -1.93
Ccdc9bA3KGF9 Gm16186-201ENSMUST00000120132 216 ntBASIC2.97□□□□□ -1.93
Ccdc9bA3KGF9 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.97□□□□□ -1.93
Ccdc9bA3KGF9 Gm18486-201ENSMUST00000184040 298 ntBASIC2.97□□□□□ -1.93
Ccdc9bA3KGF9 Gm37085-201ENSMUST00000193780 196 ntBASIC2.97□□□□□ -1.93
Ccdc9bA3KGF9 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC2.97□□□□□ -1.93
Ccdc9bA3KGF9 Gm39147-201ENSMUST00000211376 465 ntBASIC2.97□□□□□ -1.93
Ccdc9bA3KGF9 AC173115.1-201ENSMUST00000220835 211 ntBASIC2.97□□□□□ -1.93
Ccdc9bA3KGF9 Mir155-201ENSMUST00000083463 65 ntBASIC2.97□□□□□ -1.93
Ccdc9bA3KGF9 Gm26175-201ENSMUST00000083794 131 ntBASIC2.97□□□□□ -1.93
Ccdc9bA3KGF9 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Ccdc9bA3KGF9 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Ccdc9bA3KGF9 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Ccdc9bA3KGF9 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Ccdc9bA3KGF9 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Ccdc9bA3KGF9 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms