Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm45543-201ENSMUST00000209327 88 ntBASIC1.76□□□□□ -2.13
H2afb1S4R1E0 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.76□□□□□ -2.13
H2afb1S4R1E0 AC173345.2-201ENSMUST00000222795 153 ntBASIC1.76□□□□□ -2.13
H2afb1S4R1E0 AC183092.1-201ENSMUST00000224301 153 ntBASIC1.76□□□□□ -2.13
H2afb1S4R1E0 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.76□□□□□ -2.13
H2afb1S4R1E0 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.76□□□□□ -2.13
H2afb1S4R1E0 AC183096.2-201ENSMUST00000228733 457 ntBASIC1.76□□□□□ -2.13
H2afb1S4R1E0 Gm9795-201ENSMUST00000062156 693 ntBASIC1.76□□□□□ -2.13
H2afb1S4R1E0 AC160115.1-201ENSMUST00000224678 1574 ntBASIC1.76□□□□□ -2.13
H2afb1S4R1E0 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
H2afb1S4R1E0 Gm11598-201ENSMUST00000119257 357 ntBASIC1.75□□□□□ -2.13
H2afb1S4R1E0 Gm26479-201ENSMUST00000122620 106 ntBASIC1.75□□□□□ -2.13
H2afb1S4R1E0 Gm24385-201ENSMUST00000122694 350 ntBASIC1.75□□□□□ -2.13
H2afb1S4R1E0 Gm22984-201ENSMUST00000122751 122 ntBASIC1.75□□□□□ -2.13
H2afb1S4R1E0 Gm22883-201ENSMUST00000157376 106 ntBASIC1.75□□□□□ -2.13
H2afb1S4R1E0 Gm25711-201ENSMUST00000158633 128 ntBASIC1.75□□□□□ -2.13
H2afb1S4R1E0 Gm24222-201ENSMUST00000158834 93 ntBASIC1.75□□□□□ -2.13
H2afb1S4R1E0 Gm25643-201ENSMUST00000158874 103 ntBASIC1.75□□□□□ -2.13
H2afb1S4R1E0 Gm20438-201ENSMUST00000174441 329 ntBASIC1.75□□□□□ -2.13
H2afb1S4R1E0 Gm24818-201ENSMUST00000175093 161 ntBASIC1.75□□□□□ -2.13
H2afb1S4R1E0 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.75□□□□□ -2.13
H2afb1S4R1E0 Gm32175-201ENSMUST00000193641 346 ntBASIC1.75□□□□□ -2.13
H2afb1S4R1E0 Mir6375-201ENSMUST00000197176 95 ntBASIC1.75□□□□□ -2.13
H2afb1S4R1E0 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.75□□□□□ -2.13
H2afb1S4R1E0 AC154390.1-201ENSMUST00000225629 277 ntBASIC1.75□□□□□ -2.13
H2afb1S4R1E0 Gm11351-202ENSMUST00000225724 478 ntBASIC1.75□□□□□ -2.13
H2afb1S4R1E0 Gm10222-201ENSMUST00000088336 294 ntBASIC1.75□□□□□ -2.13
H2afb1S4R1E0 Gm24164-201ENSMUST00000093663 104 ntBASIC1.75□□□□□ -2.13
H2afb1S4R1E0 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
H2afb1S4R1E0 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.74□□□□□ -2.13
H2afb1S4R1E0 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
H2afb1S4R1E0 Mir1195-201ENSMUST00000116818 98 ntBASIC1.74□□□□□ -2.13
H2afb1S4R1E0 Gm22027-201ENSMUST00000122737 127 ntBASIC1.74□□□□□ -2.13
H2afb1S4R1E0 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.74□□□□□ -2.13
H2afb1S4R1E0 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
H2afb1S4R1E0 Gm23983-201ENSMUST00000157142 114 ntBASIC1.74□□□□□ -2.13
H2afb1S4R1E0 Gm26345-201ENSMUST00000157534 120 ntBASIC1.74□□□□□ -2.13
H2afb1S4R1E0 Gm17161-201ENSMUST00000169187 524 ntBASIC1.74□□□□□ -2.13
H2afb1S4R1E0 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
H2afb1S4R1E0 Gm23977-201ENSMUST00000177871 74 ntBASIC1.74□□□□□ -2.13
H2afb1S4R1E0 Gm26435-201ENSMUST00000179026 107 ntBASIC1.74□□□□□ -2.13
H2afb1S4R1E0 Gm37918-201ENSMUST00000192071 120 ntBASIC1.74□□□□□ -2.13
H2afb1S4R1E0 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.74□□□□□ -2.13
H2afb1S4R1E0 Gm10092-201ENSMUST00000077110 180 ntBASIC1.74□□□□□ -2.13
H2afb1S4R1E0 Gm23039-201ENSMUST00000083870 161 ntBASIC1.74□□□□□ -2.13
H2afb1S4R1E0 Gm42770-201ENSMUST00000199657 4155 ntBASIC1.73□□□□□ -2.13
H2afb1S4R1E0 Mir873a-201ENSMUST00000104863 77 ntBASIC1.73□□□□□ -2.13
H2afb1S4R1E0 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
H2afb1S4R1E0 Gm22281-201ENSMUST00000157198 103 ntBASIC1.73□□□□□ -2.13
H2afb1S4R1E0 Gm22675-201ENSMUST00000158430 104 ntBASIC1.73□□□□□ -2.13
H2afb1S4R1E0 Snord11-201ENSMUST00000158468 84 ntBASIC1.73□□□□□ -2.13
H2afb1S4R1E0 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC1.73□□□□□ -2.13
H2afb1S4R1E0 Gm24390-201ENSMUST00000179578 62 ntBASIC1.73□□□□□ -2.13
H2afb1S4R1E0 Mir6336-201ENSMUST00000183581 130 ntBASIC1.73□□□□□ -2.13
H2afb1S4R1E0 Gm27544-201ENSMUST00000185069 155 ntBASIC1.73□□□□□ -2.13
H2afb1S4R1E0 Gm28992-201ENSMUST00000190534 139 ntBASIC1.73□□□□□ -2.13
H2afb1S4R1E0 Gm42960-201ENSMUST00000202160 241 ntBASIC1.73□□□□□ -2.13
H2afb1S4R1E0 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.73□□□□□ -2.13
H2afb1S4R1E0 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
H2afb1S4R1E0 Gm25090-201ENSMUST00000104000 132 ntBASIC1.72□□□□□ -2.13
H2afb1S4R1E0 Gm23013-201ENSMUST00000104146 106 ntBASIC1.72□□□□□ -2.13
H2afb1S4R1E0 Gm25529-201ENSMUST00000104850 92 ntBASIC1.72□□□□□ -2.13
H2afb1S4R1E0 Gm12417-201ENSMUST00000119153 403 ntBASIC1.72□□□□□ -2.13
H2afb1S4R1E0 Gm24598-201ENSMUST00000122510 74 ntBASIC1.72□□□□□ -2.13
H2afb1S4R1E0 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.72□□□□□ -2.13
H2afb1S4R1E0 Gm25392-201ENSMUST00000157335 297 ntBASIC1.72□□□□□ -2.13
H2afb1S4R1E0 Gm25253-201ENSMUST00000179958 107 ntBASIC1.72□□□□□ -2.13
H2afb1S4R1E0 Gm27793-201ENSMUST00000183405 76 ntBASIC1.72□□□□□ -2.13
H2afb1S4R1E0 Gm27979-201ENSMUST00000185126 56 ntBASIC1.72□□□□□ -2.13
H2afb1S4R1E0 Gm28921-201ENSMUST00000190219 378 ntBASIC1.72□□□□□ -2.13
H2afb1S4R1E0 Mir465d-201ENSMUST00000196314 58 ntBASIC1.72□□□□□ -2.13
H2afb1S4R1E0 Gm42834-201ENSMUST00000196845 256 ntBASIC1.72□□□□□ -2.13
H2afb1S4R1E0 Gm44989-201ENSMUST00000204749 217 ntBASIC1.72□□□□□ -2.13
H2afb1S4R1E0 Gm45907-201ENSMUST00000213023 193 ntBASIC1.72□□□□□ -2.13
H2afb1S4R1E0 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC1.72□□□□□ -2.13
H2afb1S4R1E0 Gm25788-201ENSMUST00000082721 131 ntBASIC1.72□□□□□ -2.13
H2afb1S4R1E0 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
H2afb1S4R1E0 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.72□□□□□ -2.13
H2afb1S4R1E0 Gm23982-201ENSMUST00000157141 106 ntBASIC1.71□□□□□ -2.14
H2afb1S4R1E0 Gm25051-201ENSMUST00000158602 249 ntBASIC1.71□□□□□ -2.14
H2afb1S4R1E0 Gm17052-201ENSMUST00000165496 289 ntBASIC1.71□□□□□ -2.14
H2afb1S4R1E0 Gm23090-201ENSMUST00000177331 78 ntBASIC1.71□□□□□ -2.14
H2afb1S4R1E0 Gm45013-201ENSMUST00000206883 178 ntBASIC1.71□□□□□ -2.14
H2afb1S4R1E0 AC165157.3-201ENSMUST00000220815 103 ntBASIC1.71□□□□□ -2.14
H2afb1S4R1E0 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.71□□□□□ -2.14
H2afb1S4R1E0 Gm46997-201ENSMUST00000222108 217 ntBASIC1.71□□□□□ -2.14
H2afb1S4R1E0 Gm25130-201ENSMUST00000082650 156 ntBASIC1.71□□□□□ -2.14
H2afb1S4R1E0 Gm24204-201ENSMUST00000082950 107 ntBASIC1.71□□□□□ -2.14
H2afb1S4R1E0 Gm26493-201ENSMUST00000083155 136 ntBASIC1.71□□□□□ -2.14
H2afb1S4R1E0 Mir107-201ENSMUST00000083660 87 ntBASIC1.71□□□□□ -2.14
H2afb1S4R1E0 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.71□□□□□ -2.14
H2afb1S4R1E0 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
H2afb1S4R1E0 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
H2afb1S4R1E0 Gm23015-201ENSMUST00000104145 128 ntBASIC1.7□□□□□ -2.14
H2afb1S4R1E0 Gm12941-201ENSMUST00000117934 220 ntBASIC1.7□□□□□ -2.14
H2afb1S4R1E0 Gm22321-201ENSMUST00000157152 104 ntBASIC1.7□□□□□ -2.14
H2afb1S4R1E0 Gm24909-201ENSMUST00000157290 280 ntBASIC1.7□□□□□ -2.14
H2afb1S4R1E0 Gm25333-201ENSMUST00000158035 246 ntBASIC1.7□□□□□ -2.14
H2afb1S4R1E0 Gm22731-201ENSMUST00000158086 94 ntBASIC1.7□□□□□ -2.14
H2afb1S4R1E0 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms