Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm25491-201ENSMUST00000158733 308 ntBASIC0.3□□□□□ -2.36
Scn8aQ9WTU3 Gm26116-201ENSMUST00000175600 77 ntBASIC0.3□□□□□ -2.36
Scn8aQ9WTU3 Gm27236-201ENSMUST00000184147 442 ntBASIC0.3□□□□□ -2.36
Scn8aQ9WTU3 Gm10193-201ENSMUST00000188288 231 ntBASIC0.3□□□□□ -2.36
Scn8aQ9WTU3 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC0.3□□□□□ -2.36
Scn8aQ9WTU3 Gm44392-201ENSMUST00000196758 115 ntBASIC0.3□□□□□ -2.36
Scn8aQ9WTU3 Gm32300-201ENSMUST00000221735 515 ntBASIC0.3□□□□□ -2.36
Scn8aQ9WTU3 AC151833.1-201ENSMUST00000227752 574 ntBASIC0.3□□□□□ -2.36
Scn8aQ9WTU3 AC163295.1-201ENSMUST00000227840 314 ntBASIC0.3□□□□□ -2.36
Scn8aQ9WTU3 Gm22229-201ENSMUST00000082987 108 ntBASIC0.3□□□□□ -2.36
Scn8aQ9WTU3 Gm26326-201ENSMUST00000083070 129 ntBASIC0.3□□□□□ -2.36
Scn8aQ9WTU3 Gm4746-201ENSMUST00000120395 2406 ntBASIC0.29□□□□□ -2.36
Scn8aQ9WTU3 Gm13475-201ENSMUST00000119290 234 ntBASIC0.29□□□□□ -2.36
Scn8aQ9WTU3 Gm23557-201ENSMUST00000157820 138 ntBASIC0.29□□□□□ -2.36
Scn8aQ9WTU3 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
Scn8aQ9WTU3 Gm27545-201ENSMUST00000184755 202 ntBASIC0.29□□□□□ -2.36
Scn8aQ9WTU3 Gm44055-201ENSMUST00000204376 247 ntBASIC0.29□□□□□ -2.36
Scn8aQ9WTU3 Gm44487-201ENSMUST00000205145 325 ntBASIC0.29□□□□□ -2.36
Scn8aQ9WTU3 AC124772.1-201ENSMUST00000221325 151 ntBASIC0.29□□□□□ -2.36
Scn8aQ9WTU3 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
Scn8aQ9WTU3 Gm24527-201ENSMUST00000082920 107 ntBASIC0.29□□□□□ -2.36
Scn8aQ9WTU3 Gm24268-201ENSMUST00000082990 110 ntBASIC0.29□□□□□ -2.36
Scn8aQ9WTU3 Gm22759-201ENSMUST00000102276 96 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm22831-201ENSMUST00000102473 109 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm14884-201ENSMUST00000120456 196 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm24596-201ENSMUST00000122504 107 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm22281-201ENSMUST00000157198 103 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm24584-201ENSMUST00000157972 107 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm25211-201ENSMUST00000177553 107 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm25245-201ENSMUST00000178139 107 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm26245-201ENSMUST00000178491 107 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm23610-201ENSMUST00000178659 107 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm25101-201ENSMUST00000179057 107 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm23712-201ENSMUST00000179713 107 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm25173-201ENSMUST00000179794 107 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm24870-201ENSMUST00000179897 107 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm22645-201ENSMUST00000180010 107 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm24565-201ENSMUST00000180099 107 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm23805-201ENSMUST00000180129 107 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm25327-201ENSMUST00000180263 107 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm22418-201ENSMUST00000180326 107 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm28740-201ENSMUST00000186142 215 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm43220-201ENSMUST00000199299 282 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm43993-201ENSMUST00000203972 247 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 AC162387.1-201ENSMUST00000213369 213 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm23629-201ENSMUST00000082465 107 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm23924-201ENSMUST00000082474 108 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm22749-201ENSMUST00000082490 107 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm22747-201ENSMUST00000082495 107 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm22063-201ENSMUST00000082560 107 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm23057-201ENSMUST00000082801 107 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm26324-201ENSMUST00000083073 107 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm24535-201ENSMUST00000083140 107 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm26127-201ENSMUST00000083193 107 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm24456-201ENSMUST00000083198 107 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm24018-201ENSMUST00000083232 107 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm25577-201ENSMUST00000083414 107 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm24861-201ENSMUST00000083459 107 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Mir350-201ENSMUST00000083639 99 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm23103-201ENSMUST00000083725 107 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm23732-201ENSMUST00000083751 107 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm22352-201ENSMUST00000083917 107 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm24448-201ENSMUST00000083979 107 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm22886-201ENSMUST00000093714 107 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm24381-201ENSMUST00000122697 104 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Mir6389-201ENSMUST00000183661 102 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm35212-201ENSMUST00000196672 606 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 AC125020.2-201ENSMUST00000218894 348 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 AC116465.1-201ENSMUST00000220324 235 ntBASIC0.28□□□□□ -2.36
Scn8aQ9WTU3 AC164297.1-201ENSMUST00000224484 1561 ntBASIC0.28□□□□□ -2.37
Scn8aQ9WTU3 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.28□□□□□ -2.37
Scn8aQ9WTU3 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.27□□□□□ -2.37
Scn8aQ9WTU3 Gm26271-201ENSMUST00000158349 104 ntBASIC0.27□□□□□ -2.37
Scn8aQ9WTU3 Gm18296-201ENSMUST00000192475 783 ntBASIC0.27□□□□□ -2.37
Scn8aQ9WTU3 Gm26265-202ENSMUST00000196326 133 ntBASIC0.27□□□□□ -2.37
Scn8aQ9WTU3 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC0.27□□□□□ -2.37
Scn8aQ9WTU3 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
Scn8aQ9WTU3 DQ267101-201ENSMUST00000082562 73 ntBASIC0.27□□□□□ -2.37
Scn8aQ9WTU3 Gm25475-201ENSMUST00000082825 180 ntBASIC0.27□□□□□ -2.37
Scn8aQ9WTU3 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.27□□□□□ -2.37
Scn8aQ9WTU3 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC0.27□□□□□ -2.37
Scn8aQ9WTU3 Gm13729-201ENSMUST00000120328 406 ntBASIC0.26□□□□□ -2.37
Scn8aQ9WTU3 Gm22143-201ENSMUST00000157401 203 ntBASIC0.26□□□□□ -2.37
Scn8aQ9WTU3 Gm23535-201ENSMUST00000157542 106 ntBASIC0.26□□□□□ -2.37
Scn8aQ9WTU3 Gm22522-201ENSMUST00000158271 151 ntBASIC0.26□□□□□ -2.37
Scn8aQ9WTU3 Mir1936-201ENSMUST00000158699 93 ntBASIC0.26□□□□□ -2.37
Scn8aQ9WTU3 Gm36956-201ENSMUST00000193830 214 ntBASIC0.26□□□□□ -2.37
Scn8aQ9WTU3 Mir6896-201ENSMUST00000198033 73 ntBASIC0.26□□□□□ -2.37
Scn8aQ9WTU3 Gm44828-201ENSMUST00000203745 106 ntBASIC0.26□□□□□ -2.37
Scn8aQ9WTU3 AC122905.2-201ENSMUST00000220325 269 ntBASIC0.26□□□□□ -2.37
Scn8aQ9WTU3 AC153864.2-201ENSMUST00000220424 292 ntBASIC0.26□□□□□ -2.37
Scn8aQ9WTU3 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC0.26□□□□□ -2.37
Scn8aQ9WTU3 Gm9973-202ENSMUST00000220926 166 ntBASIC0.26□□□□□ -2.37
Scn8aQ9WTU3 CT009733.1-203ENSMUST00000224033 451 ntBASIC0.26□□□□□ -2.37
Scn8aQ9WTU3 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 98.8 ms