Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Trim3Q9R1R2 Gm25937-201ENSMUST00000083912 107 ntBASIC1.45□□□□□ -2.18
Trim3Q9R1R2 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Trim3Q9R1R2 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Trim3Q9R1R2 Gm25938-201ENSMUST00000104139 166 ntBASIC1.44□□□□□ -2.18
Trim3Q9R1R2 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Trim3Q9R1R2 Gm15162-201ENSMUST00000119325 283 ntBASIC1.44□□□□□ -2.18
Trim3Q9R1R2 Gm8121-201ENSMUST00000153583 499 ntBASIC1.44□□□□□ -2.18
Trim3Q9R1R2 Gm24076-201ENSMUST00000158179 94 ntBASIC1.44□□□□□ -2.18
Trim3Q9R1R2 Gm25671-201ENSMUST00000178612 105 ntBASIC1.44□□□□□ -2.18
Trim3Q9R1R2 Gm23307-201ENSMUST00000179167 105 ntBASIC1.44□□□□□ -2.18
Trim3Q9R1R2 Gm25286-201ENSMUST00000179790 105 ntBASIC1.44□□□□□ -2.18
Trim3Q9R1R2 Mir6388-201ENSMUST00000184417 75 ntBASIC1.44□□□□□ -2.18
Trim3Q9R1R2 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.44□□□□□ -2.18
Trim3Q9R1R2 Gm43250-201ENSMUST00000196536 273 ntBASIC1.44□□□□□ -2.18
Trim3Q9R1R2 Gm45456-201ENSMUST00000210841 243 ntBASIC1.44□□□□□ -2.18
Trim3Q9R1R2 Gm45907-201ENSMUST00000213023 193 ntBASIC1.44□□□□□ -2.18
Trim3Q9R1R2 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC1.44□□□□□ -2.18
Trim3Q9R1R2 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
Trim3Q9R1R2 Gm24355-201ENSMUST00000082858 122 ntBASIC1.44□□□□□ -2.18
Trim3Q9R1R2 Snord118-201ENSMUST00000082965 135 ntBASIC1.44□□□□□ -2.18
Trim3Q9R1R2 Snora3-201ENSMUST00000083082 132 ntBASIC1.44□□□□□ -2.18
Trim3Q9R1R2 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Trim3Q9R1R2 Gm25832-201ENSMUST00000104140 130 ntBASIC1.43□□□□□ -2.18
Trim3Q9R1R2 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Trim3Q9R1R2 Gm14906-201ENSMUST00000119265 390 ntBASIC1.43□□□□□ -2.18
Trim3Q9R1R2 Gm15861-201ENSMUST00000120979 339 ntBASIC1.43□□□□□ -2.18
Trim3Q9R1R2 Gm25914-201ENSMUST00000157618 153 ntBASIC1.43□□□□□ -2.18
Trim3Q9R1R2 Gm25491-201ENSMUST00000158733 308 ntBASIC1.43□□□□□ -2.18
Trim3Q9R1R2 Mir669a-7-201ENSMUST00000180364 87 ntBASIC1.43□□□□□ -2.18
Trim3Q9R1R2 Gm27793-201ENSMUST00000183405 76 ntBASIC1.43□□□□□ -2.18
Trim3Q9R1R2 Gm27898-201ENSMUST00000183987 80 ntBASIC1.43□□□□□ -2.18
Trim3Q9R1R2 Mir6419-201ENSMUST00000184784 113 ntBASIC1.43□□□□□ -2.18
Trim3Q9R1R2 Gm28288-201ENSMUST00000191019 214 ntBASIC1.43□□□□□ -2.18
Trim3Q9R1R2 Gm37918-201ENSMUST00000192071 120 ntBASIC1.43□□□□□ -2.18
Trim3Q9R1R2 Mir669a-6-201ENSMUST00000196127 87 ntBASIC1.43□□□□□ -2.18
Trim3Q9R1R2 Mir669a-12-201ENSMUST00000197274 87 ntBASIC1.43□□□□□ -2.18
Trim3Q9R1R2 Mir669a-5-201ENSMUST00000197439 87 ntBASIC1.43□□□□□ -2.18
Trim3Q9R1R2 Mir669a-10-201ENSMUST00000197745 87 ntBASIC1.43□□□□□ -2.18
Trim3Q9R1R2 Mir669a-11-201ENSMUST00000197952 87 ntBASIC1.43□□□□□ -2.18
Trim3Q9R1R2 Mir669a-4-201ENSMUST00000198665 87 ntBASIC1.43□□□□□ -2.18
Trim3Q9R1R2 Mir669a-9-201ENSMUST00000200087 87 ntBASIC1.43□□□□□ -2.18
Trim3Q9R1R2 Mir669a-8-201ENSMUST00000200268 87 ntBASIC1.43□□□□□ -2.18
Trim3Q9R1R2 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC1.43□□□□□ -2.18
Trim3Q9R1R2 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.43□□□□□ -2.18
Trim3Q9R1R2 Gm16976-205ENSMUST00000227324 226 ntBASIC1.43□□□□□ -2.18
Trim3Q9R1R2 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.43□□□□□ -2.18
Trim3Q9R1R2 Gm25930-201ENSMUST00000082785 107 ntBASIC1.43□□□□□ -2.18
Trim3Q9R1R2 Gm25789-201ENSMUST00000083294 76 ntBASIC1.43□□□□□ -2.18
Trim3Q9R1R2 Mir320-201ENSMUST00000083594 82 ntBASIC1.43□□□□□ -2.18
Trim3Q9R1R2 Gm15102-201ENSMUST00000118740 1502 ntBASIC1.43□□□□□ -2.18
Trim3Q9R1R2 Gm15101-201ENSMUST00000178818 1502 ntBASIC1.43□□□□□ -2.18
Trim3Q9R1R2 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Trim3Q9R1R2 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.43□□□□□ -2.18
Trim3Q9R1R2 Gm14307-201ENSMUST00000118930 291 ntBASIC1.42□□□□□ -2.18
Trim3Q9R1R2 Gm11834-201ENSMUST00000122257 585 ntBASIC1.42□□□□□ -2.18
Trim3Q9R1R2 Gm14297-201ENSMUST00000129110 291 ntBASIC1.42□□□□□ -2.18
Trim3Q9R1R2 Gm16362-201ENSMUST00000135189 214 ntBASIC1.42□□□□□ -2.18
Trim3Q9R1R2 Gm16358-201ENSMUST00000146046 210 ntBASIC1.42□□□□□ -2.18
Trim3Q9R1R2 Gm23779-201ENSMUST00000157938 64 ntBASIC1.42□□□□□ -2.18
Trim3Q9R1R2 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC1.42□□□□□ -2.18
Trim3Q9R1R2 Gm37713-201ENSMUST00000191746 198 ntBASIC1.42□□□□□ -2.18
Trim3Q9R1R2 AC164086.1-201ENSMUST00000221038 289 ntBASIC1.42□□□□□ -2.18
Trim3Q9R1R2 Gm11351-202ENSMUST00000225724 478 ntBASIC1.42□□□□□ -2.18
Trim3Q9R1R2 Gm23625-201ENSMUST00000082457 100 ntBASIC1.42□□□□□ -2.18
Trim3Q9R1R2 Gm24625-201ENSMUST00000082622 130 ntBASIC1.42□□□□□ -2.18
Trim3Q9R1R2 Gm24536-201ENSMUST00000083144 107 ntBASIC1.42□□□□□ -2.18
Trim3Q9R1R2 Gm23851-201ENSMUST00000083831 103 ntBASIC1.42□□□□□ -2.18
Trim3Q9R1R2 Gm24163-201ENSMUST00000093660 132 ntBASIC1.42□□□□□ -2.18
Trim3Q9R1R2 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.42□□□□□ -2.18
Trim3Q9R1R2 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.42□□□□□ -2.18
Trim3Q9R1R2 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Trim3Q9R1R2 Gm14882-201ENSMUST00000117216 218 ntBASIC1.41□□□□□ -2.18
Trim3Q9R1R2 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC1.41□□□□□ -2.18
Trim3Q9R1R2 Gm23921-201ENSMUST00000175258 107 ntBASIC1.41□□□□□ -2.18
Trim3Q9R1R2 Gm28912-201ENSMUST00000189001 234 ntBASIC1.41□□□□□ -2.18
Trim3Q9R1R2 Gm44491-201ENSMUST00000196794 96 ntBASIC1.41□□□□□ -2.18
Trim3Q9R1R2 Gm42834-201ENSMUST00000196845 256 ntBASIC1.41□□□□□ -2.18
Trim3Q9R1R2 Gm45207-201ENSMUST00000207469 145 ntBASIC1.41□□□□□ -2.18
Trim3Q9R1R2 AC192333.1-201ENSMUST00000224573 376 ntBASIC1.41□□□□□ -2.18
Trim3Q9R1R2 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.41□□□□□ -2.18
Trim3Q9R1R2 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.4□□□□□ -2.18
Trim3Q9R1R2 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.4□□□□□ -2.18
Trim3Q9R1R2 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
Trim3Q9R1R2 Mir653-201ENSMUST00000102402 85 ntBASIC1.4□□□□□ -2.19
Trim3Q9R1R2 Gm22021-201ENSMUST00000104353 107 ntBASIC1.4□□□□□ -2.19
Trim3Q9R1R2 Gm26255-201ENSMUST00000122492 103 ntBASIC1.4□□□□□ -2.19
Trim3Q9R1R2 Gm22598-201ENSMUST00000157600 127 ntBASIC1.4□□□□□ -2.19
Trim3Q9R1R2 Gm23558-201ENSMUST00000157823 80 ntBASIC1.4□□□□□ -2.19
Trim3Q9R1R2 Gm24229-201ENSMUST00000158830 118 ntBASIC1.4□□□□□ -2.19
Trim3Q9R1R2 Gm24737-201ENSMUST00000158861 100 ntBASIC1.4□□□□□ -2.19
Trim3Q9R1R2 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Trim3Q9R1R2 Gm22862-201ENSMUST00000178593 121 ntBASIC1.4□□□□□ -2.19
Trim3Q9R1R2 Gm25450-201ENSMUST00000179144 107 ntBASIC1.4□□□□□ -2.19
Trim3Q9R1R2 Mir7009-201ENSMUST00000184519 64 ntBASIC1.4□□□□□ -2.19
Trim3Q9R1R2 Gm43220-201ENSMUST00000199299 282 ntBASIC1.4□□□□□ -2.19
Trim3Q9R1R2 Gm23370-201ENSMUST00000199545 130 ntBASIC1.4□□□□□ -2.19
Trim3Q9R1R2 Gm43505-201ENSMUST00000200579 139 ntBASIC1.4□□□□□ -2.19
Trim3Q9R1R2 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.4□□□□□ -2.19
Trim3Q9R1R2 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 213.8 ms