Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm22629-201ENSMUST00000178272 79 ntBASIC3.59□□□□□ -1.83
Prpf40aQ9R1C7 Gm24021-201ENSMUST00000178435 79 ntBASIC3.59□□□□□ -1.83
Prpf40aQ9R1C7 Gm22274-201ENSMUST00000178441 79 ntBASIC3.59□□□□□ -1.83
Prpf40aQ9R1C7 Gm22050-201ENSMUST00000178442 79 ntBASIC3.59□□□□□ -1.83
Prpf40aQ9R1C7 Gm23688-201ENSMUST00000178502 79 ntBASIC3.59□□□□□ -1.83
Prpf40aQ9R1C7 Gm23944-201ENSMUST00000178607 79 ntBASIC3.59□□□□□ -1.83
Prpf40aQ9R1C7 Gm26283-201ENSMUST00000178625 79 ntBASIC3.59□□□□□ -1.83
Prpf40aQ9R1C7 Gm25452-201ENSMUST00000178776 79 ntBASIC3.59□□□□□ -1.83
Prpf40aQ9R1C7 Gm23286-201ENSMUST00000178963 79 ntBASIC3.59□□□□□ -1.83
Prpf40aQ9R1C7 Gm22640-201ENSMUST00000179035 79 ntBASIC3.59□□□□□ -1.83
Prpf40aQ9R1C7 Gm25984-201ENSMUST00000179129 79 ntBASIC3.59□□□□□ -1.83
Prpf40aQ9R1C7 Gm25585-201ENSMUST00000179469 79 ntBASIC3.59□□□□□ -1.83
Prpf40aQ9R1C7 Gm26374-201ENSMUST00000179737 79 ntBASIC3.59□□□□□ -1.83
Prpf40aQ9R1C7 Gm24040-201ENSMUST00000179786 79 ntBASIC3.59□□□□□ -1.83
Prpf40aQ9R1C7 Gm25017-201ENSMUST00000179805 79 ntBASIC3.59□□□□□ -1.83
Prpf40aQ9R1C7 Gm23618-201ENSMUST00000179912 79 ntBASIC3.59□□□□□ -1.83
Prpf40aQ9R1C7 Gm26284-201ENSMUST00000180107 79 ntBASIC3.59□□□□□ -1.83
Prpf40aQ9R1C7 Gm24570-201ENSMUST00000180314 79 ntBASIC3.59□□□□□ -1.83
Prpf40aQ9R1C7 Gm24654-201ENSMUST00000180315 79 ntBASIC3.59□□□□□ -1.83
Prpf40aQ9R1C7 mt-Ta-201ENSMUST00000082398 69 ntBASIC3.59□□□□□ -1.83
Prpf40aQ9R1C7 Gm25124-201ENSMUST00000083345 164 ntBASIC3.59□□□□□ -1.83
Prpf40aQ9R1C7 Mir193a-201ENSMUST00000083461 66 ntBASIC3.59□□□□□ -1.83
Prpf40aQ9R1C7 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
Prpf40aQ9R1C7 Gm42785-201ENSMUST00000202316 3835 ntBASIC3.58□□□□□ -1.84
Prpf40aQ9R1C7 Gm22003-201ENSMUST00000101885 107 ntBASIC3.58□□□□□ -1.84
Prpf40aQ9R1C7 Gm25323-201ENSMUST00000122555 103 ntBASIC3.58□□□□□ -1.84
Prpf40aQ9R1C7 Gm22756-201ENSMUST00000180118 107 ntBASIC3.58□□□□□ -1.84
Prpf40aQ9R1C7 Gm43602-201ENSMUST00000196772 300 ntBASIC3.58□□□□□ -1.84
Prpf40aQ9R1C7 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.58□□□□□ -1.84
Prpf40aQ9R1C7 Gm26054-201ENSMUST00000083037 107 ntBASIC3.58□□□□□ -1.84
Prpf40aQ9R1C7 Gm22738-201ENSMUST00000083440 147 ntBASIC3.58□□□□□ -1.84
Prpf40aQ9R1C7 Gm24492-201ENSMUST00000083798 107 ntBASIC3.58□□□□□ -1.84
Prpf40aQ9R1C7 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Prpf40aQ9R1C7 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Prpf40aQ9R1C7 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.58□□□□□ -1.84
Prpf40aQ9R1C7 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Prpf40aQ9R1C7 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.57□□□□□ -1.84
Prpf40aQ9R1C7 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC3.57□□□□□ -1.84
Prpf40aQ9R1C7 n-R5s191-201ENSMUST00000122724 116 ntBASIC3.57□□□□□ -1.84
Prpf40aQ9R1C7 Gm23043-201ENSMUST00000157890 109 ntBASIC3.57□□□□□ -1.84
Prpf40aQ9R1C7 Gm25491-201ENSMUST00000158733 308 ntBASIC3.57□□□□□ -1.84
Prpf40aQ9R1C7 Gm29604-201ENSMUST00000187176 163 ntBASIC3.57□□□□□ -1.84
Prpf40aQ9R1C7 Gm43381-201ENSMUST00000198553 165 ntBASIC3.57□□□□□ -1.84
Prpf40aQ9R1C7 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC3.57□□□□□ -1.84
Prpf40aQ9R1C7 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Prpf40aQ9R1C7 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Prpf40aQ9R1C7 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
Prpf40aQ9R1C7 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
Prpf40aQ9R1C7 Gm22590-201ENSMUST00000104247 128 ntBASIC3.56□□□□□ -1.84
Prpf40aQ9R1C7 Gm24982-201ENSMUST00000104456 132 ntBASIC3.56□□□□□ -1.84
Prpf40aQ9R1C7 Gm22946-201ENSMUST00000158558 82 ntBASIC3.56□□□□□ -1.84
Prpf40aQ9R1C7 Gm25977-201ENSMUST00000158697 85 ntBASIC3.56□□□□□ -1.84
Prpf40aQ9R1C7 Gm43898-201ENSMUST00000204456 424 ntBASIC3.56□□□□□ -1.84
Prpf40aQ9R1C7 Gm44976-201ENSMUST00000205543 261 ntBASIC3.56□□□□□ -1.84
Prpf40aQ9R1C7 Gm9370-201ENSMUST00000222787 609 ntBASIC3.56□□□□□ -1.84
Prpf40aQ9R1C7 Gm25797-201ENSMUST00000082640 107 ntBASIC3.56□□□□□ -1.84
Prpf40aQ9R1C7 Gm25130-201ENSMUST00000082650 156 ntBASIC3.56□□□□□ -1.84
Prpf40aQ9R1C7 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Prpf40aQ9R1C7 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Prpf40aQ9R1C7 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Prpf40aQ9R1C7 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.55□□□□□ -1.84
Prpf40aQ9R1C7 Gm23609-201ENSMUST00000104542 127 ntBASIC3.55□□□□□ -1.84
Prpf40aQ9R1C7 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.55□□□□□ -1.84
Prpf40aQ9R1C7 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC3.55□□□□□ -1.84
Prpf40aQ9R1C7 Gm25825-201ENSMUST00000157091 124 ntBASIC3.55□□□□□ -1.84
Prpf40aQ9R1C7 Gm4479-201ENSMUST00000178807 171 ntBASIC3.55□□□□□ -1.84
Prpf40aQ9R1C7 Gm18665-201ENSMUST00000189783 270 ntBASIC3.55□□□□□ -1.84
Prpf40aQ9R1C7 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC3.55□□□□□ -1.84
Prpf40aQ9R1C7 Gm44084-201ENSMUST00000203947 409 ntBASIC3.55□□□□□ -1.84
Prpf40aQ9R1C7 Gm9712-201ENSMUST00000210842 311 ntBASIC3.55□□□□□ -1.84
Prpf40aQ9R1C7 Gm24533-201ENSMUST00000083138 196 ntBASIC3.55□□□□□ -1.84
Prpf40aQ9R1C7 Gm25513-201ENSMUST00000083861 162 ntBASIC3.55□□□□□ -1.84
Prpf40aQ9R1C7 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Prpf40aQ9R1C7 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Prpf40aQ9R1C7 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Prpf40aQ9R1C7 Gm26423-201ENSMUST00000104277 128 ntBASIC3.54□□□□□ -1.84
Prpf40aQ9R1C7 Gm6954-201ENSMUST00000117416 225 ntBASIC3.54□□□□□ -1.84
Prpf40aQ9R1C7 Gm15067-201ENSMUST00000119534 156 ntBASIC3.54□□□□□ -1.84
Prpf40aQ9R1C7 Gm24916-201ENSMUST00000157287 79 ntBASIC3.54□□□□□ -1.84
Prpf40aQ9R1C7 Gm24314-201ENSMUST00000158274 123 ntBASIC3.54□□□□□ -1.84
Prpf40aQ9R1C7 Mir3106-201ENSMUST00000175401 82 ntBASIC3.54□□□□□ -1.84
Prpf40aQ9R1C7 Gm32381-201ENSMUST00000203192 476 ntBASIC3.54□□□□□ -1.84
Prpf40aQ9R1C7 Gm44057-201ENSMUST00000204547 96 ntBASIC3.54□□□□□ -1.84
Prpf40aQ9R1C7 Gm44399-201ENSMUST00000205043 226 ntBASIC3.54□□□□□ -1.84
Prpf40aQ9R1C7 Gm23136-201ENSMUST00000083425 99 ntBASIC3.54□□□□□ -1.84
Prpf40aQ9R1C7 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Prpf40aQ9R1C7 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Prpf40aQ9R1C7 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Prpf40aQ9R1C7 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Prpf40aQ9R1C7 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Prpf40aQ9R1C7 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Prpf40aQ9R1C7 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Prpf40aQ9R1C7 Gm25882-201ENSMUST00000157784 85 ntBASIC3.53□□□□□ -1.84
Prpf40aQ9R1C7 Gm22532-201ENSMUST00000158822 140 ntBASIC3.53□□□□□ -1.84
Prpf40aQ9R1C7 Gm27374-201ENSMUST00000183660 81 ntBASIC3.53□□□□□ -1.84
Prpf40aQ9R1C7 Gm28002-201ENSMUST00000184832 100 ntBASIC3.53□□□□□ -1.84
Prpf40aQ9R1C7 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.53□□□□□ -1.84
Prpf40aQ9R1C7 Gm37104-201ENSMUST00000193278 196 ntBASIC3.53□□□□□ -1.84
Prpf40aQ9R1C7 Gm42719-201ENSMUST00000197393 355 ntBASIC3.53□□□□□ -1.84
Prpf40aQ9R1C7 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms