Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Gm22658-201ENSMUST00000104196 155 ntBASIC2.59□□□□□ -1.99
Ldb3Q9JKS4 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Ldb3Q9JKS4 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
Ldb3Q9JKS4 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC2.59□□□□□ -1.99
Ldb3Q9JKS4 Snord93-201ENSMUST00000175580 71 ntBASIC2.59□□□□□ -1.99
Ldb3Q9JKS4 Gm27582-201ENSMUST00000184084 126 ntBASIC2.59□□□□□ -1.99
Ldb3Q9JKS4 Gm37428-201ENSMUST00000193886 137 ntBASIC2.59□□□□□ -1.99
Ldb3Q9JKS4 Gm44024-201ENSMUST00000203008 476 ntBASIC2.59□□□□□ -1.99
Ldb3Q9JKS4 Gm44052-201ENSMUST00000203382 396 ntBASIC2.59□□□□□ -1.99
Ldb3Q9JKS4 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.59□□□□□ -1.99
Ldb3Q9JKS4 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.59□□□□□ -1.99
Ldb3Q9JKS4 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Ldb3Q9JKS4 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
Ldb3Q9JKS4 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
Ldb3Q9JKS4 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Ldb3Q9JKS4 Gm24126-201ENSMUST00000104111 106 ntBASIC2.58□□□□□ -2
Ldb3Q9JKS4 Gm14536-201ENSMUST00000118324 138 ntBASIC2.58□□□□□ -2
Ldb3Q9JKS4 Gm15027-201ENSMUST00000120922 138 ntBASIC2.58□□□□□ -2
Ldb3Q9JKS4 Gm24595-201ENSMUST00000122501 110 ntBASIC2.58□□□□□ -2
Ldb3Q9JKS4 Gm22477-201ENSMUST00000122569 316 ntBASIC2.58□□□□□ -2
Ldb3Q9JKS4 Gm24141-201ENSMUST00000122776 115 ntBASIC2.58□□□□□ -2
Ldb3Q9JKS4 Gm23324-201ENSMUST00000157421 131 ntBASIC2.58□□□□□ -2
Ldb3Q9JKS4 Gm22966-201ENSMUST00000157957 129 ntBASIC2.58□□□□□ -2
Ldb3Q9JKS4 Gm25490-201ENSMUST00000158734 130 ntBASIC2.58□□□□□ -2
Ldb3Q9JKS4 Gm25933-201ENSMUST00000178943 108 ntBASIC2.58□□□□□ -2
Ldb3Q9JKS4 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.58□□□□□ -2
Ldb3Q9JKS4 Gm44476-201ENSMUST00000196225 91 ntBASIC2.58□□□□□ -2
Ldb3Q9JKS4 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.58□□□□□ -2
Ldb3Q9JKS4 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.58□□□□□ -2
Ldb3Q9JKS4 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.58□□□□□ -2
Ldb3Q9JKS4 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Ldb3Q9JKS4 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
Ldb3Q9JKS4 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Ldb3Q9JKS4 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ldb3Q9JKS4 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Ldb3Q9JKS4 Gm12412-201ENSMUST00000121867 328 ntBASIC2.57□□□□□ -2
Ldb3Q9JKS4 Gm23194-201ENSMUST00000158813 105 ntBASIC2.57□□□□□ -2
Ldb3Q9JKS4 Gm26160-201ENSMUST00000158965 63 ntBASIC2.57□□□□□ -2
Ldb3Q9JKS4 Gm22853-201ENSMUST00000174974 131 ntBASIC2.57□□□□□ -2
Ldb3Q9JKS4 Gm26435-201ENSMUST00000179026 107 ntBASIC2.57□□□□□ -2
Ldb3Q9JKS4 Gm37037-201ENSMUST00000194475 424 ntBASIC2.57□□□□□ -2
Ldb3Q9JKS4 Gm37796-201ENSMUST00000195327 134 ntBASIC2.57□□□□□ -2
Ldb3Q9JKS4 Gm44256-201ENSMUST00000203304 335 ntBASIC2.57□□□□□ -2
Ldb3Q9JKS4 Mir340-201ENSMUST00000083483 98 ntBASIC2.57□□□□□ -2
Ldb3Q9JKS4 Mir186-201ENSMUST00000083497 71 ntBASIC2.57□□□□□ -2
Ldb3Q9JKS4 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Ldb3Q9JKS4 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Ldb3Q9JKS4 Gm11471-201ENSMUST00000121824 198 ntBASIC2.56□□□□□ -2
Ldb3Q9JKS4 DQ267100-201ENSMUST00000122600 72 ntBASIC2.56□□□□□ -2
Ldb3Q9JKS4 Gm24443-201ENSMUST00000157242 132 ntBASIC2.56□□□□□ -2
Ldb3Q9JKS4 Gm16111-201ENSMUST00000162128 285 ntBASIC2.56□□□□□ -2
Ldb3Q9JKS4 Gm5224-201ENSMUST00000183060 350 ntBASIC2.56□□□□□ -2
Ldb3Q9JKS4 AC125167.1-201ENSMUST00000198698 141 ntBASIC2.56□□□□□ -2
Ldb3Q9JKS4 Gm45288-201ENSMUST00000210236 151 ntBASIC2.56□□□□□ -2
Ldb3Q9JKS4 Gm30534-201ENSMUST00000217928 207 ntBASIC2.56□□□□□ -2
Ldb3Q9JKS4 CT025689.3-201ENSMUST00000223817 301 ntBASIC2.56□□□□□ -2
Ldb3Q9JKS4 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.56□□□□□ -2
Ldb3Q9JKS4 Gm22686-201ENSMUST00000082847 100 ntBASIC2.56□□□□□ -2
Ldb3Q9JKS4 Gm26126-201ENSMUST00000083188 164 ntBASIC2.56□□□□□ -2
Ldb3Q9JKS4 Gm25987-201ENSMUST00000083234 107 ntBASIC2.56□□□□□ -2
Ldb3Q9JKS4 Gm23095-201ENSMUST00000083446 107 ntBASIC2.56□□□□□ -2
Ldb3Q9JKS4 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Ldb3Q9JKS4 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ldb3Q9JKS4 Gm22141-201ENSMUST00000157403 277 ntBASIC2.55□□□□□ -2
Ldb3Q9JKS4 Gm22850-201ENSMUST00000157714 82 ntBASIC2.55□□□□□ -2
Ldb3Q9JKS4 Gm23895-201ENSMUST00000158108 160 ntBASIC2.55□□□□□ -2
Ldb3Q9JKS4 Gm27249-201ENSMUST00000185049 328 ntBASIC2.55□□□□□ -2
Ldb3Q9JKS4 Gm37545-201ENSMUST00000186512 148 ntBASIC2.55□□□□□ -2
Ldb3Q9JKS4 Gm6801-201ENSMUST00000190697 339 ntBASIC2.55□□□□□ -2
Ldb3Q9JKS4 Gm42855-201ENSMUST00000197388 253 ntBASIC2.55□□□□□ -2
Ldb3Q9JKS4 Gm43587-201ENSMUST00000199590 204 ntBASIC2.55□□□□□ -2
Ldb3Q9JKS4 Gm45492-201ENSMUST00000211611 288 ntBASIC2.55□□□□□ -2
Ldb3Q9JKS4 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.55□□□□□ -2
Ldb3Q9JKS4 AC154515.1-201ENSMUST00000226085 2841 ntBASIC2.55□□□□□ -2
Ldb3Q9JKS4 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.55□□□□□ -2
Ldb3Q9JKS4 Gm4945-201ENSMUST00000075152 453 ntBASIC2.55□□□□□ -2
Ldb3Q9JKS4 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Ldb3Q9JKS4 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Ldb3Q9JKS4 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Ldb3Q9JKS4 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.55□□□□□ -2
Ldb3Q9JKS4 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Ldb3Q9JKS4 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Ldb3Q9JKS4 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.54□□□□□ -2
Ldb3Q9JKS4 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Ldb3Q9JKS4 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.54□□□□□ -2
Ldb3Q9JKS4 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.54□□□□□ -2
Ldb3Q9JKS4 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.54□□□□□ -2
Ldb3Q9JKS4 Gm26277-201ENSMUST00000157097 152 ntBASIC2.54□□□□□ -2
Ldb3Q9JKS4 Gm23588-201ENSMUST00000157659 99 ntBASIC2.54□□□□□ -2
Ldb3Q9JKS4 Gm25888-201ENSMUST00000157778 302 ntBASIC2.54□□□□□ -2
Ldb3Q9JKS4 Gm24573-201ENSMUST00000175499 112 ntBASIC2.54□□□□□ -2
Ldb3Q9JKS4 Gm18546-201ENSMUST00000197245 676 ntBASIC2.54□□□□□ -2
Ldb3Q9JKS4 Gm24977-201ENSMUST00000083106 163 ntBASIC2.54□□□□□ -2
Ldb3Q9JKS4 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
Ldb3Q9JKS4 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Ldb3Q9JKS4 Gm25539-201ENSMUST00000116886 122 ntBASIC2.53□□□□□ -2
Ldb3Q9JKS4 Gm13560-201ENSMUST00000121865 329 ntBASIC2.53□□□□□ -2
Ldb3Q9JKS4 Gm25280-201ENSMUST00000157269 101 ntBASIC2.53□□□□□ -2
Ldb3Q9JKS4 Gm23718-201ENSMUST00000157350 307 ntBASIC2.53□□□□□ -2
Ldb3Q9JKS4 Gm4479-201ENSMUST00000178807 171 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 92.2 ms