Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm20386-201ENSMUST00000174010 132 ntBASIC0.91□□□□□ -2.26
Trem1Q9JKE2 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
Trem1Q9JKE2 Gm27236-201ENSMUST00000184147 442 ntBASIC0.91□□□□□ -2.26
Trem1Q9JKE2 Gm37579-201ENSMUST00000194291 142 ntBASIC0.91□□□□□ -2.26
Trem1Q9JKE2 Gm25820-202ENSMUST00000197479 128 ntBASIC0.91□□□□□ -2.26
Trem1Q9JKE2 Gm44301-201ENSMUST00000200362 143 ntBASIC0.91□□□□□ -2.26
Trem1Q9JKE2 Gm45119-201ENSMUST00000207612 199 ntBASIC0.91□□□□□ -2.26
Trem1Q9JKE2 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC0.91□□□□□ -2.26
Trem1Q9JKE2 Gm10264-201ENSMUST00000220589 429 ntBASIC0.91□□□□□ -2.26
Trem1Q9JKE2 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC0.91□□□□□ -2.26
Trem1Q9JKE2 Gm20462-201ENSMUST00000172623 408 ntBASIC0.9□□□□□ -2.27
Trem1Q9JKE2 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.9□□□□□ -2.27
Trem1Q9JKE2 Mir3103-201ENSMUST00000175474 67 ntBASIC0.9□□□□□ -2.27
Trem1Q9JKE2 Gm26430-201ENSMUST00000178054 107 ntBASIC0.9□□□□□ -2.27
Trem1Q9JKE2 Gm26652-202ENSMUST00000181672 475 ntBASIC0.9□□□□□ -2.27
Trem1Q9JKE2 Gm27640-201ENSMUST00000184580 147 ntBASIC0.9□□□□□ -2.27
Trem1Q9JKE2 Gm27545-201ENSMUST00000184755 202 ntBASIC0.9□□□□□ -2.27
Trem1Q9JKE2 Mir7017-201ENSMUST00000184894 62 ntBASIC0.9□□□□□ -2.27
Trem1Q9JKE2 AC116589.1-201ENSMUST00000220634 327 ntBASIC0.9□□□□□ -2.27
Trem1Q9JKE2 Gm33654-201ENSMUST00000221704 215 ntBASIC0.9□□□□□ -2.27
Trem1Q9JKE2 Gm11351-202ENSMUST00000225724 478 ntBASIC0.9□□□□□ -2.27
Trem1Q9JKE2 AC117202.2-201ENSMUST00000226491 1101 ntBASIC0.9□□□□□ -2.27
Trem1Q9JKE2 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
Trem1Q9JKE2 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
Trem1Q9JKE2 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
Trem1Q9JKE2 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC0.89□□□□□ -2.27
Trem1Q9JKE2 Gm8935-202ENSMUST00000105727 1959 ntBASIC0.89□□□□□ -2.27
Trem1Q9JKE2 Gm14296-202ENSMUST00000108931 750 ntBASIC0.89□□□□□ -2.27
Trem1Q9JKE2 Gm15162-201ENSMUST00000119325 283 ntBASIC0.89□□□□□ -2.27
Trem1Q9JKE2 Gm16358-201ENSMUST00000146046 210 ntBASIC0.89□□□□□ -2.27
Trem1Q9JKE2 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC0.89□□□□□ -2.27
Trem1Q9JKE2 Gm22515-201ENSMUST00000158273 305 ntBASIC0.89□□□□□ -2.27
Trem1Q9JKE2 Gm22136-201ENSMUST00000158751 268 ntBASIC0.89□□□□□ -2.27
Trem1Q9JKE2 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC0.89□□□□□ -2.27
Trem1Q9JKE2 Mir6381-201ENSMUST00000183426 87 ntBASIC0.89□□□□□ -2.27
Trem1Q9JKE2 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
Trem1Q9JKE2 Gm44726-201ENSMUST00000203427 217 ntBASIC0.89□□□□□ -2.27
Trem1Q9JKE2 Gm45402-201ENSMUST00000211796 223 ntBASIC0.89□□□□□ -2.27
Trem1Q9JKE2 AC122905.2-201ENSMUST00000220325 269 ntBASIC0.89□□□□□ -2.27
Trem1Q9JKE2 AC170600.1-201ENSMUST00000228763 277 ntBASIC0.89□□□□□ -2.27
Trem1Q9JKE2 Gm25801-201ENSMUST00000082638 106 ntBASIC0.89□□□□□ -2.27
Trem1Q9JKE2 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC0.89□□□□□ -2.27
Trem1Q9JKE2 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC0.88□□□□□ -2.27
Trem1Q9JKE2 Mir1b-201ENSMUST00000117012 122 ntBASIC0.88□□□□□ -2.27
Trem1Q9JKE2 Gm13720-201ENSMUST00000120741 196 ntBASIC0.88□□□□□ -2.27
Trem1Q9JKE2 Gm13341-201ENSMUST00000120780 672 ntBASIC0.88□□□□□ -2.27
Trem1Q9JKE2 Gm11334-201ENSMUST00000121969 156 ntBASIC0.88□□□□□ -2.27
Trem1Q9JKE2 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC0.88□□□□□ -2.27
Trem1Q9JKE2 Gm23016-201ENSMUST00000158431 62 ntBASIC0.88□□□□□ -2.27
Trem1Q9JKE2 Gm25314-201ENSMUST00000178810 79 ntBASIC0.88□□□□□ -2.27
Trem1Q9JKE2 Mir6380-201ENSMUST00000184334 81 ntBASIC0.88□□□□□ -2.27
Trem1Q9JKE2 Gm28992-201ENSMUST00000190534 139 ntBASIC0.88□□□□□ -2.27
Trem1Q9JKE2 Igkv4-65-201ENSMUST00000196986 358 ntBASIC0.88□□□□□ -2.27
Trem1Q9JKE2 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC0.88□□□□□ -2.27
Trem1Q9JKE2 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC0.88□□□□□ -2.27
Trem1Q9JKE2 AC125020.2-201ENSMUST00000218894 348 ntBASIC0.88□□□□□ -2.27
Trem1Q9JKE2 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.88□□□□□ -2.27
Trem1Q9JKE2 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.88□□□□□ -2.27
Trem1Q9JKE2 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
Trem1Q9JKE2 Gm22704-201ENSMUST00000083027 137 ntBASIC0.88□□□□□ -2.27
Trem1Q9JKE2 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
Trem1Q9JKE2 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC0.87□□□□□ -2.27
Trem1Q9JKE2 Gm22435-201ENSMUST00000158552 128 ntBASIC0.87□□□□□ -2.27
Trem1Q9JKE2 Gm24277-201ENSMUST00000158661 104 ntBASIC0.87□□□□□ -2.27
Trem1Q9JKE2 Gm28408-201ENSMUST00000191557 463 ntBASIC0.87□□□□□ -2.27
Trem1Q9JKE2 Gm44921-201ENSMUST00000205290 301 ntBASIC0.87□□□□□ -2.27
Trem1Q9JKE2 AC154484.1-201ENSMUST00000227311 771 ntBASIC0.87□□□□□ -2.27
Trem1Q9JKE2 Gm25851-201ENSMUST00000082794 107 ntBASIC0.87□□□□□ -2.27
Trem1Q9JKE2 Mir219a-2-201ENSMUST00000083551 97 ntBASIC0.87□□□□□ -2.27
Trem1Q9JKE2 Mir22-201ENSMUST00000083595 95 ntBASIC0.87□□□□□ -2.27
Trem1Q9JKE2 AC160115.1-201ENSMUST00000224678 1574 ntBASIC0.87□□□□□ -2.27
Trem1Q9JKE2 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
Trem1Q9JKE2 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
Trem1Q9JKE2 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
Trem1Q9JKE2 Gm25011-201ENSMUST00000158398 126 ntBASIC0.86□□□□□ -2.27
Trem1Q9JKE2 Gm38323-201ENSMUST00000192450 210 ntBASIC0.86□□□□□ -2.27
Trem1Q9JKE2 Gm43427-201ENSMUST00000198188 331 ntBASIC0.86□□□□□ -2.27
Trem1Q9JKE2 Gm44960-201ENSMUST00000207403 141 ntBASIC0.86□□□□□ -2.27
Trem1Q9JKE2 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.86□□□□□ -2.27
Trem1Q9JKE2 AC133517.1-203ENSMUST00000225570 390 ntBASIC0.86□□□□□ -2.27
Trem1Q9JKE2 Gm25513-201ENSMUST00000083861 162 ntBASIC0.86□□□□□ -2.27
Trem1Q9JKE2 Gm22689-201ENSMUST00000102452 110 ntBASIC0.85□□□□□ -2.27
Trem1Q9JKE2 Gm25832-201ENSMUST00000104140 130 ntBASIC0.85□□□□□ -2.27
Trem1Q9JKE2 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
Trem1Q9JKE2 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
Trem1Q9JKE2 Gm25884-201ENSMUST00000157782 62 ntBASIC0.85□□□□□ -2.27
Trem1Q9JKE2 Gm22447-201ENSMUST00000158155 92 ntBASIC0.85□□□□□ -2.27
Trem1Q9JKE2 Gm23114-201ENSMUST00000158478 117 ntBASIC0.85□□□□□ -2.27
Trem1Q9JKE2 Gm25069-201ENSMUST00000175238 86 ntBASIC0.85□□□□□ -2.27
Trem1Q9JKE2 Gm38113-201ENSMUST00000193704 201 ntBASIC0.85□□□□□ -2.27
Trem1Q9JKE2 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
Trem1Q9JKE2 Gm25578-201ENSMUST00000083406 104 ntBASIC0.85□□□□□ -2.27
Trem1Q9JKE2 Mir155-201ENSMUST00000083463 65 ntBASIC0.85□□□□□ -2.27
Trem1Q9JKE2 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
Trem1Q9JKE2 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
Trem1Q9JKE2 Gm26080-201ENSMUST00000104069 131 ntBASIC0.84□□□□□ -2.27
Trem1Q9JKE2 Gm22545-201ENSMUST00000104350 132 ntBASIC0.84□□□□□ -2.27
Trem1Q9JKE2 Gm25805-201ENSMUST00000122788 108 ntBASIC0.84□□□□□ -2.27
Trem1Q9JKE2 Gm23542-201ENSMUST00000158208 96 ntBASIC0.84□□□□□ -2.27
Trem1Q9JKE2 Gm29022-201ENSMUST00000190702 225 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms