Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC-1.12□□□□□ -2.59
Smco4Q9JIS3 Gm3027-201ENSMUST00000167579 451 ntBASIC-1.13□□□□□ -2.59
Smco4Q9JIS3 Gm24510-201ENSMUST00000174965 94 ntBASIC-1.13□□□□□ -2.59
Smco4Q9JIS3 Mir7010-201ENSMUST00000183464 63 ntBASIC-1.13□□□□□ -2.59
Smco4Q9JIS3 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC-1.13□□□□□ -2.59
Smco4Q9JIS3 Gm43924-201ENSMUST00000204851 1736 ntBASIC-1.13□□□□□ -2.59
Smco4Q9JIS3 Gm14417-201ENSMUST00000120036 1074 ntBASIC-1.14□□□□□ -2.59
Smco4Q9JIS3 Gm15529-201ENSMUST00000121833 994 ntBASIC-1.14□□□□□ -2.59
Smco4Q9JIS3 Gm14368-201ENSMUST00000145305 415 ntBASIC-1.14□□□□□ -2.59
Smco4Q9JIS3 Mir1933-201ENSMUST00000158930 88 ntBASIC-1.14□□□□□ -2.59
Smco4Q9JIS3 AL450317.1-201ENSMUST00000213941 291 ntBASIC-1.14□□□□□ -2.59
Smco4Q9JIS3 AC153864.2-201ENSMUST00000220424 292 ntBASIC-1.14□□□□□ -2.59
Smco4Q9JIS3 Gm23629-201ENSMUST00000082465 107 ntBASIC-1.14□□□□□ -2.59
Smco4Q9JIS3 Mir30a-201ENSMUST00000083471 71 ntBASIC-1.14□□□□□ -2.59
Smco4Q9JIS3 Mir103-1-201ENSMUST00000083619 86 ntBASIC-1.14□□□□□ -2.59
Smco4Q9JIS3 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC-1.15□□□□□ -2.59
Smco4Q9JIS3 Gm24793-201ENSMUST00000104289 132 ntBASIC-1.15□□□□□ -2.59
Smco4Q9JIS3 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC-1.15□□□□□ -2.59
Smco4Q9JIS3 Gm23205-201ENSMUST00000158671 103 ntBASIC-1.15□□□□□ -2.59
Smco4Q9JIS3 Gm37709-201ENSMUST00000195074 600 ntBASIC-1.15□□□□□ -2.59
Smco4Q9JIS3 Gm45673-201ENSMUST00000210293 358 ntBASIC-1.15□□□□□ -2.59
Smco4Q9JIS3 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC-1.15□□□□□ -2.59
Smco4Q9JIS3 Gm24163-201ENSMUST00000093660 132 ntBASIC-1.15□□□□□ -2.59
Smco4Q9JIS3 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC-1.16□□□□□ -2.6
Smco4Q9JIS3 Gm23989-201ENSMUST00000117030 66 ntBASIC-1.16□□□□□ -2.6
Smco4Q9JIS3 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC-1.16□□□□□ -2.6
Smco4Q9JIS3 Gm11219-201ENSMUST00000118565 358 ntBASIC-1.16□□□□□ -2.6
Smco4Q9JIS3 Gm13804-201ENSMUST00000119552 172 ntBASIC-1.16□□□□□ -2.6
Smco4Q9JIS3 Gm23829-201ENSMUST00000157392 270 ntBASIC-1.16□□□□□ -2.6
Smco4Q9JIS3 Gm22801-201ENSMUST00000175624 84 ntBASIC-1.16□□□□□ -2.6
Smco4Q9JIS3 Gm29229-201ENSMUST00000188874 323 ntBASIC-1.16□□□□□ -2.6
Smco4Q9JIS3 Gm10297-201ENSMUST00000207136 651 ntBASIC-1.16□□□□□ -2.6
Smco4Q9JIS3 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC-1.16□□□□□ -2.6
Smco4Q9JIS3 Gm22421-201ENSMUST00000083058 107 ntBASIC-1.16□□□□□ -2.6
Smco4Q9JIS3 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC-1.16□□□□□ -2.6
Smco4Q9JIS3 Mir5124a-201ENSMUST00000175528 72 ntBASIC-1.17□□□□□ -2.6
Smco4Q9JIS3 Mir6342-201ENSMUST00000183870 125 ntBASIC-1.17□□□□□ -2.6
Smco4Q9JIS3 Gm42475-201ENSMUST00000201212 295 ntBASIC-1.17□□□□□ -2.6
Smco4Q9JIS3 AC156795.1-201ENSMUST00000214655 414 ntBASIC-1.17□□□□□ -2.6
Smco4Q9JIS3 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC-1.17□□□□□ -2.6
Smco4Q9JIS3 Gm25388-201ENSMUST00000157339 151 ntBASIC-1.18□□□□□ -2.6
Smco4Q9JIS3 Gm22340-201ENSMUST00000157717 114 ntBASIC-1.18□□□□□ -2.6
Smco4Q9JIS3 Gm24464-201ENSMUST00000179697 107 ntBASIC-1.18□□□□□ -2.6
Smco4Q9JIS3 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC-1.18□□□□□ -2.6
Smco4Q9JIS3 Gm19885-201ENSMUST00000212853 343 ntBASIC-1.18□□□□□ -2.6
Smco4Q9JIS3 CT033781.2-201ENSMUST00000221113 153 ntBASIC-1.18□□□□□ -2.6
Smco4Q9JIS3 Gm25008-201ENSMUST00000083809 81 ntBASIC-1.18□□□□□ -2.6
Smco4Q9JIS3 Snord89-201ENSMUST00000104516 110 ntBASIC-1.19□□□□□ -2.6
Smco4Q9JIS3 Gm14358-201ENSMUST00000118458 403 ntBASIC-1.19□□□□□ -2.6
Smco4Q9JIS3 Gm11522-201ENSMUST00000120533 176 ntBASIC-1.19□□□□□ -2.6
Smco4Q9JIS3 Gm14922-201ENSMUST00000121131 163 ntBASIC-1.19□□□□□ -2.6
Smco4Q9JIS3 Gm26278-201ENSMUST00000157098 132 ntBASIC-1.19□□□□□ -2.6
Smco4Q9JIS3 Gm22114-201ENSMUST00000177756 107 ntBASIC-1.19□□□□□ -2.6
Smco4Q9JIS3 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC-1.19□□□□□ -2.6
Smco4Q9JIS3 Gm18340-201ENSMUST00000196342 609 ntBASIC-1.19□□□□□ -2.6
Smco4Q9JIS3 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-1.19□□□□□ -2.6
Smco4Q9JIS3 AC140477.1-201ENSMUST00000222354 246 ntBASIC-1.19□□□□□ -2.6
Smco4Q9JIS3 CT030184.1-201ENSMUST00000222393 416 ntBASIC-1.19□□□□□ -2.6
Smco4Q9JIS3 Gm23690-201ENSMUST00000083036 94 ntBASIC-1.19□□□□□ -2.6
Smco4Q9JIS3 Gm25582-201ENSMUST00000083412 110 ntBASIC-1.19□□□□□ -2.6
Smco4Q9JIS3 Gm24430-201ENSMUST00000104077 104 ntBASIC-1.2□□□□□ -2.6
Smco4Q9JIS3 Gm23482-201ENSMUST00000104172 122 ntBASIC-1.2□□□□□ -2.6
Smco4Q9JIS3 Gm25787-201ENSMUST00000104709 92 ntBASIC-1.2□□□□□ -2.6
Smco4Q9JIS3 Gm14887-201ENSMUST00000119522 663 ntBASIC-1.2□□□□□ -2.6
Smco4Q9JIS3 Gm42857-201ENSMUST00000200823 339 ntBASIC-1.2□□□□□ -2.6
Smco4Q9JIS3 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC-1.2□□□□□ -2.6
Smco4Q9JIS3 Gm25496-201ENSMUST00000104430 120 ntBASIC-1.21□□□□□ -2.6
Smco4Q9JIS3 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC-1.21□□□□□ -2.6
Smco4Q9JIS3 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC-1.21□□□□□ -2.6
Smco4Q9JIS3 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC-1.21□□□□□ -2.6
Smco4Q9JIS3 Mir7038-201ENSMUST00000184833 71 ntBASIC-1.21□□□□□ -2.6
Smco4Q9JIS3 Gm37361-201ENSMUST00000194345 132 ntBASIC-1.21□□□□□ -2.6
Smco4Q9JIS3 Mir18-201ENSMUST00000083469 96 ntBASIC-1.21□□□□□ -2.6
Smco4Q9JIS3 Mir30c-2-201ENSMUST00000083633 84 ntBASIC-1.21□□□□□ -2.6
Smco4Q9JIS3 Snord69-201ENSMUST00000104024 80 ntBASIC-1.22□□□□□ -2.6
Smco4Q9JIS3 Gm18417-201ENSMUST00000176564 648 ntBASIC-1.22□□□□□ -2.6
Smco4Q9JIS3 Gm27884-201ENSMUST00000183865 76 ntBASIC-1.22□□□□□ -2.6
Smco4Q9JIS3 Gm19032-201ENSMUST00000208584 592 ntBASIC-1.22□□□□□ -2.6
Smco4Q9JIS3 Gm46136-201ENSMUST00000214730 565 ntBASIC-1.22□□□□□ -2.6
Smco4Q9JIS3 Gm22149-201ENSMUST00000104442 136 ntBASIC-1.23□□□□□ -2.61
Smco4Q9JIS3 Gm25884-201ENSMUST00000157782 62 ntBASIC-1.23□□□□□ -2.61
Smco4Q9JIS3 Gm28418-201ENSMUST00000186179 423 ntBASIC-1.23□□□□□ -2.61
Smco4Q9JIS3 Gm5899-201ENSMUST00000071770 270 ntBASIC-1.23□□□□□ -2.61
Smco4Q9JIS3 Gm22685-201ENSMUST00000082848 106 ntBASIC-1.23□□□□□ -2.61
Smco4Q9JIS3 Gm25006-201ENSMUST00000083813 107 ntBASIC-1.23□□□□□ -2.61
Smco4Q9JIS3 Gm23741-201ENSMUST00000097237 171 ntBASIC-1.23□□□□□ -2.61
Smco4Q9JIS3 Gm14296-202ENSMUST00000108931 750 ntBASIC-1.24□□□□□ -2.61
Smco4Q9JIS3 Gm22279-201ENSMUST00000157200 93 ntBASIC-1.24□□□□□ -2.61
Smco4Q9JIS3 Gm23331-201ENSMUST00000157423 108 ntBASIC-1.24□□□□□ -2.61
Smco4Q9JIS3 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC-1.24□□□□□ -2.61
Smco4Q9JIS3 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-1.24□□□□□ -2.61
Smco4Q9JIS3 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-1.24□□□□□ -2.61
Smco4Q9JIS3 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC-1.24□□□□□ -2.61
Smco4Q9JIS3 Gm23996-201ENSMUST00000158062 131 ntBASIC-1.25□□□□□ -2.61
Smco4Q9JIS3 Gm29640-201ENSMUST00000187972 278 ntBASIC-1.25□□□□□ -2.61
Smco4Q9JIS3 Gm38231-201ENSMUST00000192030 347 ntBASIC-1.25□□□□□ -2.61
Smco4Q9JIS3 Gm35212-201ENSMUST00000196672 606 ntBASIC-1.25□□□□□ -2.61
Smco4Q9JIS3 AC129019.2-201ENSMUST00000222063 202 ntBASIC-1.25□□□□□ -2.61
Smco4Q9JIS3 AC114916.1-201ENSMUST00000228465 494 ntBASIC-1.25□□□□□ -2.61
Smco4Q9JIS3 Gm25791-201ENSMUST00000083292 137 ntBASIC-1.25□□□□□ -2.61
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms