Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Gm23444-201ENSMUST00000082922 191 ntBASIC2.46□□□□□ -2.02
Copb1Q9JIF7 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.46□□□□□ -2.02
Copb1Q9JIF7 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Copb1Q9JIF7 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.45□□□□□ -2.02
Copb1Q9JIF7 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Copb1Q9JIF7 Gm24683-201ENSMUST00000104840 88 ntBASIC2.45□□□□□ -2.02
Copb1Q9JIF7 Gm14843-201ENSMUST00000119596 212 ntBASIC2.45□□□□□ -2.02
Copb1Q9JIF7 n-R5s150-201ENSMUST00000122705 108 ntBASIC2.45□□□□□ -2.02
Copb1Q9JIF7 Gm25863-201ENSMUST00000158249 329 ntBASIC2.45□□□□□ -2.02
Copb1Q9JIF7 Gm27793-201ENSMUST00000183405 76 ntBASIC2.45□□□□□ -2.02
Copb1Q9JIF7 Gm44024-201ENSMUST00000203008 476 ntBASIC2.45□□□□□ -2.02
Copb1Q9JIF7 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.45□□□□□ -2.02
Copb1Q9JIF7 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Copb1Q9JIF7 Gm24164-201ENSMUST00000093663 104 ntBASIC2.45□□□□□ -2.02
Copb1Q9JIF7 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.44□□□□□ -2.02
Copb1Q9JIF7 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Copb1Q9JIF7 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.44□□□□□ -2.02
Copb1Q9JIF7 Gm26015-201ENSMUST00000104402 125 ntBASIC2.44□□□□□ -2.02
Copb1Q9JIF7 Gm23492-201ENSMUST00000116837 115 ntBASIC2.44□□□□□ -2.02
Copb1Q9JIF7 Gm25783-201ENSMUST00000122525 190 ntBASIC2.44□□□□□ -2.02
Copb1Q9JIF7 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.44□□□□□ -2.02
Copb1Q9JIF7 Gm37037-201ENSMUST00000194475 424 ntBASIC2.44□□□□□ -2.02
Copb1Q9JIF7 AC157476.1-201ENSMUST00000215555 169 ntBASIC2.44□□□□□ -2.02
Copb1Q9JIF7 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Copb1Q9JIF7 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.44□□□□□ -2.02
Copb1Q9JIF7 Gm6954-201ENSMUST00000117416 225 ntBASIC2.43□□□□□ -2.02
Copb1Q9JIF7 Gm22097-201ENSMUST00000157929 278 ntBASIC2.43□□□□□ -2.02
Copb1Q9JIF7 Gm27959-201ENSMUST00000185172 111 ntBASIC2.43□□□□□ -2.02
Copb1Q9JIF7 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.43□□□□□ -2.02
Copb1Q9JIF7 Gm29014-201ENSMUST00000191422 326 ntBASIC2.43□□□□□ -2.02
Copb1Q9JIF7 Gm43676-201ENSMUST00000197532 540 ntBASIC2.43□□□□□ -2.02
Copb1Q9JIF7 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.43□□□□□ -2.02
Copb1Q9JIF7 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC2.43□□□□□ -2.02
Copb1Q9JIF7 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.43□□□□□ -2.02
Copb1Q9JIF7 Gm25789-201ENSMUST00000083294 76 ntBASIC2.43□□□□□ -2.02
Copb1Q9JIF7 Gm22744-201ENSMUST00000083444 65 ntBASIC2.43□□□□□ -2.02
Copb1Q9JIF7 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Copb1Q9JIF7 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
Copb1Q9JIF7 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Copb1Q9JIF7 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Copb1Q9JIF7 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Copb1Q9JIF7 Gm24274-201ENSMUST00000116787 124 ntBASIC2.42□□□□□ -2.02
Copb1Q9JIF7 Gm14602-201ENSMUST00000118625 340 ntBASIC2.42□□□□□ -2.02
Copb1Q9JIF7 Gm24594-201ENSMUST00000122502 99 ntBASIC2.42□□□□□ -2.02
Copb1Q9JIF7 Gm23466-201ENSMUST00000157133 106 ntBASIC2.42□□□□□ -2.02
Copb1Q9JIF7 Gm22227-201ENSMUST00000157356 259 ntBASIC2.42□□□□□ -2.02
Copb1Q9JIF7 Gm24480-201ENSMUST00000157442 103 ntBASIC2.42□□□□□ -2.02
Copb1Q9JIF7 Gm25015-201ENSMUST00000158400 128 ntBASIC2.42□□□□□ -2.02
Copb1Q9JIF7 Gm32175-201ENSMUST00000193641 346 ntBASIC2.42□□□□□ -2.02
Copb1Q9JIF7 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.42□□□□□ -2.02
Copb1Q9JIF7 AC173345.2-201ENSMUST00000222795 153 ntBASIC2.42□□□□□ -2.02
Copb1Q9JIF7 AC183092.1-201ENSMUST00000224301 153 ntBASIC2.42□□□□□ -2.02
Copb1Q9JIF7 AC098718.2-201ENSMUST00000226822 285 ntBASIC2.42□□□□□ -2.02
Copb1Q9JIF7 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
Copb1Q9JIF7 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.42□□□□□ -2.02
Copb1Q9JIF7 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Copb1Q9JIF7 Snord72-201ENSMUST00000104549 81 ntBASIC2.41□□□□□ -2.02
Copb1Q9JIF7 Snord19-201ENSMUST00000104609 76 ntBASIC2.41□□□□□ -2.02
Copb1Q9JIF7 Gm25529-201ENSMUST00000104850 92 ntBASIC2.41□□□□□ -2.02
Copb1Q9JIF7 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.41□□□□□ -2.02
Copb1Q9JIF7 Gm26279-201ENSMUST00000157095 102 ntBASIC2.41□□□□□ -2.02
Copb1Q9JIF7 Gm23536-201ENSMUST00000157541 134 ntBASIC2.41□□□□□ -2.02
Copb1Q9JIF7 Gm24900-201ENSMUST00000158128 134 ntBASIC2.41□□□□□ -2.02
Copb1Q9JIF7 Mir1936-201ENSMUST00000158699 93 ntBASIC2.41□□□□□ -2.02
Copb1Q9JIF7 Gm22911-201ENSMUST00000177920 107 ntBASIC2.41□□□□□ -2.02
Copb1Q9JIF7 Gm28169-201ENSMUST00000190342 345 ntBASIC2.41□□□□□ -2.02
Copb1Q9JIF7 Gm23246-201ENSMUST00000083371 67 ntBASIC2.41□□□□□ -2.02
Copb1Q9JIF7 Mir423-201ENSMUST00000083584 109 ntBASIC2.41□□□□□ -2.02
Copb1Q9JIF7 Snora69-201ENSMUST00000083708 131 ntBASIC2.41□□□□□ -2.02
Copb1Q9JIF7 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Copb1Q9JIF7 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Copb1Q9JIF7 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Copb1Q9JIF7 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
Copb1Q9JIF7 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.02
Copb1Q9JIF7 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
Copb1Q9JIF7 Mir767-201ENSMUST00000103256 107 ntBASIC2.4□□□□□ -2.03
Copb1Q9JIF7 Gm22193-201ENSMUST00000116868 76 ntBASIC2.4□□□□□ -2.03
Copb1Q9JIF7 Gm23988-201ENSMUST00000117034 122 ntBASIC2.4□□□□□ -2.03
Copb1Q9JIF7 Gm23889-201ENSMUST00000122689 104 ntBASIC2.4□□□□□ -2.03
Copb1Q9JIF7 Gm22517-201ENSMUST00000158265 136 ntBASIC2.4□□□□□ -2.03
Copb1Q9JIF7 Gm23005-201ENSMUST00000158950 136 ntBASIC2.4□□□□□ -2.03
Copb1Q9JIF7 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.4□□□□□ -2.03
Copb1Q9JIF7 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Copb1Q9JIF7 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Copb1Q9JIF7 Gm27753-201ENSMUST00000184742 203 ntBASIC2.4□□□□□ -2.03
Copb1Q9JIF7 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Copb1Q9JIF7 Gm28992-201ENSMUST00000190534 139 ntBASIC2.4□□□□□ -2.03
Copb1Q9JIF7 Gm44563-201ENSMUST00000207958 178 ntBASIC2.4□□□□□ -2.03
Copb1Q9JIF7 Gm45002-201ENSMUST00000208045 120 ntBASIC2.4□□□□□ -2.03
Copb1Q9JIF7 AC132615.1-201ENSMUST00000213873 255 ntBASIC2.4□□□□□ -2.03
Copb1Q9JIF7 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.4□□□□□ -2.03
Copb1Q9JIF7 Gm11351-202ENSMUST00000225724 478 ntBASIC2.4□□□□□ -2.03
Copb1Q9JIF7 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Copb1Q9JIF7 Gm23461-201ENSMUST00000083265 107 ntBASIC2.4□□□□□ -2.03
Copb1Q9JIF7 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.4□□□□□ -2.03
Copb1Q9JIF7 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Copb1Q9JIF7 Mir669d-201ENSMUST00000104644 121 ntBASIC2.39□□□□□ -2.03
Copb1Q9JIF7 Gm12143-201ENSMUST00000119666 332 ntBASIC2.39□□□□□ -2.03
Copb1Q9JIF7 Gm11204-201ENSMUST00000122438 147 ntBASIC2.39□□□□□ -2.03
Copb1Q9JIF7 Gm26026-201ENSMUST00000122726 123 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 101.5 ms