Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm24313-201ENSMUST00000082561 133 ntBASIC2.31□□□□□ -2.04
Trim54Q9ERP3 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Trim54Q9ERP3 AC154515.1-201ENSMUST00000226085 2841 ntBASIC2.3□□□□□ -2.04
Trim54Q9ERP3 Gm26154-201ENSMUST00000102339 96 ntBASIC2.3□□□□□ -2.04
Trim54Q9ERP3 Gm25421-201ENSMUST00000104218 164 ntBASIC2.3□□□□□ -2.04
Trim54Q9ERP3 Gm24835-201ENSMUST00000116777 111 ntBASIC2.3□□□□□ -2.04
Trim54Q9ERP3 Gm12143-201ENSMUST00000119666 332 ntBASIC2.3□□□□□ -2.04
Trim54Q9ERP3 Gm14792-201ENSMUST00000119725 258 ntBASIC2.3□□□□□ -2.04
Trim54Q9ERP3 Gm22984-201ENSMUST00000122751 122 ntBASIC2.3□□□□□ -2.04
Trim54Q9ERP3 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC2.3□□□□□ -2.04
Trim54Q9ERP3 Gm23983-201ENSMUST00000157142 114 ntBASIC2.3□□□□□ -2.04
Trim54Q9ERP3 Gm23324-201ENSMUST00000157421 131 ntBASIC2.3□□□□□ -2.04
Trim54Q9ERP3 Gm24237-201ENSMUST00000157790 132 ntBASIC2.3□□□□□ -2.04
Trim54Q9ERP3 Gm22093-201ENSMUST00000158980 111 ntBASIC2.3□□□□□ -2.04
Trim54Q9ERP3 Gm16326-201ENSMUST00000162843 414 ntBASIC2.3□□□□□ -2.04
Trim54Q9ERP3 Gm28453-203ENSMUST00000187041 189 ntBASIC2.3□□□□□ -2.04
Trim54Q9ERP3 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC2.3□□□□□ -2.04
Trim54Q9ERP3 Gm43512-201ENSMUST00000198495 176 ntBASIC2.3□□□□□ -2.04
Trim54Q9ERP3 Gm44533-201ENSMUST00000207782 268 ntBASIC2.3□□□□□ -2.04
Trim54Q9ERP3 AC125374.2-201ENSMUST00000214278 162 ntBASIC2.3□□□□□ -2.04
Trim54Q9ERP3 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.3□□□□□ -2.04
Trim54Q9ERP3 AL606472.1-201ENSMUST00000224628 275 ntBASIC2.3□□□□□ -2.04
Trim54Q9ERP3 Gm5899-201ENSMUST00000071770 270 ntBASIC2.3□□□□□ -2.04
Trim54Q9ERP3 Gm23423-201ENSMUST00000082782 106 ntBASIC2.3□□□□□ -2.04
Trim54Q9ERP3 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Trim54Q9ERP3 Gm23982-201ENSMUST00000157141 106 ntBASIC2.29□□□□□ -2.04
Trim54Q9ERP3 Gm23230-201ENSMUST00000157298 133 ntBASIC2.29□□□□□ -2.04
Trim54Q9ERP3 Gm22883-201ENSMUST00000157376 106 ntBASIC2.29□□□□□ -2.04
Trim54Q9ERP3 Gm24177-201ENSMUST00000158927 131 ntBASIC2.29□□□□□ -2.04
Trim54Q9ERP3 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
Trim54Q9ERP3 Gm7958-201ENSMUST00000178255 468 ntBASIC2.29□□□□□ -2.04
Trim54Q9ERP3 Gm26435-201ENSMUST00000179026 107 ntBASIC2.29□□□□□ -2.04
Trim54Q9ERP3 Gm7950-201ENSMUST00000179633 468 ntBASIC2.29□□□□□ -2.04
Trim54Q9ERP3 Mir7017-201ENSMUST00000184894 62 ntBASIC2.29□□□□□ -2.04
Trim54Q9ERP3 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC2.29□□□□□ -2.04
Trim54Q9ERP3 Gm24966-201ENSMUST00000082443 79 ntBASIC2.29□□□□□ -2.04
Trim54Q9ERP3 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trim54Q9ERP3 Gm42536-201ENSMUST00000197562 1613 ntBASIC2.28□□□□□ -2.04
Trim54Q9ERP3 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Trim54Q9ERP3 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Trim54Q9ERP3 Gm11936-201ENSMUST00000118323 160 ntBASIC2.28□□□□□ -2.04
Trim54Q9ERP3 Defb44-ps-201ENSMUST00000126871 219 ntBASIC2.28□□□□□ -2.04
Trim54Q9ERP3 Gm23640-201ENSMUST00000157860 104 ntBASIC2.28□□□□□ -2.04
Trim54Q9ERP3 Gm20438-201ENSMUST00000174441 329 ntBASIC2.28□□□□□ -2.04
Trim54Q9ERP3 Gm22258-201ENSMUST00000177645 94 ntBASIC2.28□□□□□ -2.04
Trim54Q9ERP3 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Trim54Q9ERP3 Gm26032-201ENSMUST00000178535 94 ntBASIC2.28□□□□□ -2.04
Trim54Q9ERP3 Gm25210-201ENSMUST00000178813 94 ntBASIC2.28□□□□□ -2.04
Trim54Q9ERP3 Gm25157-201ENSMUST00000178914 94 ntBASIC2.28□□□□□ -2.04
Trim54Q9ERP3 Gm22046-201ENSMUST00000179027 94 ntBASIC2.28□□□□□ -2.04
Trim54Q9ERP3 Gm22941-201ENSMUST00000179630 94 ntBASIC2.28□□□□□ -2.04
Trim54Q9ERP3 Gm25471-201ENSMUST00000180126 94 ntBASIC2.28□□□□□ -2.04
Trim54Q9ERP3 AC164086.1-201ENSMUST00000221038 289 ntBASIC2.28□□□□□ -2.04
Trim54Q9ERP3 Gm7214-201ENSMUST00000222428 272 ntBASIC2.28□□□□□ -2.04
Trim54Q9ERP3 AC154390.1-201ENSMUST00000225629 277 ntBASIC2.28□□□□□ -2.04
Trim54Q9ERP3 Gm22866-201ENSMUST00000083947 177 ntBASIC2.28□□□□□ -2.04
Trim54Q9ERP3 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Trim54Q9ERP3 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
Trim54Q9ERP3 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.28□□□□□ -2.05
Trim54Q9ERP3 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
Trim54Q9ERP3 Gm23015-201ENSMUST00000104145 128 ntBASIC2.27□□□□□ -2.05
Trim54Q9ERP3 Gm14588-201ENSMUST00000119895 172 ntBASIC2.27□□□□□ -2.05
Trim54Q9ERP3 Gm24385-201ENSMUST00000122694 350 ntBASIC2.27□□□□□ -2.05
Trim54Q9ERP3 Gm22083-201ENSMUST00000157586 102 ntBASIC2.27□□□□□ -2.05
Trim54Q9ERP3 Gm22099-201ENSMUST00000157925 123 ntBASIC2.27□□□□□ -2.05
Trim54Q9ERP3 Gm25643-201ENSMUST00000158874 103 ntBASIC2.27□□□□□ -2.05
Trim54Q9ERP3 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC2.27□□□□□ -2.05
Trim54Q9ERP3 Gm18546-201ENSMUST00000197245 676 ntBASIC2.27□□□□□ -2.05
Trim54Q9ERP3 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.27□□□□□ -2.05
Trim54Q9ERP3 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Trim54Q9ERP3 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Trim54Q9ERP3 Gm22358-201ENSMUST00000082877 122 ntBASIC2.27□□□□□ -2.05
Trim54Q9ERP3 Mir340-201ENSMUST00000083483 98 ntBASIC2.27□□□□□ -2.05
Trim54Q9ERP3 Gm25188-201ENSMUST00000083913 122 ntBASIC2.27□□□□□ -2.05
Trim54Q9ERP3 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Trim54Q9ERP3 Trav20-201ENSMUST00000142754 347 ntBASIC2.26□□□□□ -2.05
Trim54Q9ERP3 Mup-ps11-201ENSMUST00000178040 545 ntBASIC2.26□□□□□ -2.05
Trim54Q9ERP3 Mup-ps3-201ENSMUST00000178315 545 ntBASIC2.26□□□□□ -2.05
Trim54Q9ERP3 Mir3569-201ENSMUST00000185080 58 ntBASIC2.26□□□□□ -2.05
Trim54Q9ERP3 Gm28921-201ENSMUST00000190219 378 ntBASIC2.26□□□□□ -2.05
Trim54Q9ERP3 Gm37089-201ENSMUST00000195616 129 ntBASIC2.26□□□□□ -2.05
Trim54Q9ERP3 Gm42672-201ENSMUST00000197821 352 ntBASIC2.26□□□□□ -2.05
Trim54Q9ERP3 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC2.26□□□□□ -2.05
Trim54Q9ERP3 Mir3961-201ENSMUST00000198795 59 ntBASIC2.26□□□□□ -2.05
Trim54Q9ERP3 Gm42774-201ENSMUST00000198854 283 ntBASIC2.26□□□□□ -2.05
Trim54Q9ERP3 Gm46997-201ENSMUST00000222108 217 ntBASIC2.26□□□□□ -2.05
Trim54Q9ERP3 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Trim54Q9ERP3 Gm43706-201ENSMUST00000198767 2652 ntBASIC2.25□□□□□ -2.05
Trim54Q9ERP3 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.25□□□□□ -2.05
Trim54Q9ERP3 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Trim54Q9ERP3 n-R5s158-201ENSMUST00000104095 118 ntBASIC2.25□□□□□ -2.05
Trim54Q9ERP3 Gm14922-201ENSMUST00000121131 163 ntBASIC2.25□□□□□ -2.05
Trim54Q9ERP3 Gm25718-201ENSMUST00000158632 118 ntBASIC2.25□□□□□ -2.05
Trim54Q9ERP3 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.25□□□□□ -2.05
Trim54Q9ERP3 Gm28992-201ENSMUST00000190534 139 ntBASIC2.25□□□□□ -2.05
Trim54Q9ERP3 Gm45456-201ENSMUST00000210841 243 ntBASIC2.25□□□□□ -2.05
Trim54Q9ERP3 mt-Ti-201ENSMUST00000082393 69 ntBASIC2.25□□□□□ -2.05
Trim54Q9ERP3 Gm24615-201ENSMUST00000083268 113 ntBASIC2.25□□□□□ -2.05
Trim54Q9ERP3 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Trim54Q9ERP3 Gm24098-201ENSMUST00000102075 109 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms