Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm27926-201ENSMUST00000157180 66 ntBASIC0.83□□□□□ -2.28
Lima1Q9ERG0 Gm23329-201ENSMUST00000157415 108 ntBASIC0.83□□□□□ -2.28
Lima1Q9ERG0 Gm26393-201ENSMUST00000157625 129 ntBASIC0.83□□□□□ -2.28
Lima1Q9ERG0 Gm24005-201ENSMUST00000158459 296 ntBASIC0.83□□□□□ -2.28
Lima1Q9ERG0 Gm17148-201ENSMUST00000164702 249 ntBASIC0.83□□□□□ -2.28
Lima1Q9ERG0 Gm7258-201ENSMUST00000179317 300 ntBASIC0.83□□□□□ -2.28
Lima1Q9ERG0 Gm23379-201ENSMUST00000180026 107 ntBASIC0.83□□□□□ -2.28
Lima1Q9ERG0 Gm27894-201ENSMUST00000184177 92 ntBASIC0.83□□□□□ -2.28
Lima1Q9ERG0 Gm28414-201ENSMUST00000190111 294 ntBASIC0.83□□□□□ -2.28
Lima1Q9ERG0 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
Lima1Q9ERG0 Gm37089-201ENSMUST00000195616 129 ntBASIC0.83□□□□□ -2.28
Lima1Q9ERG0 Gm43487-201ENSMUST00000200331 1031 ntBASIC0.83□□□□□ -2.28
Lima1Q9ERG0 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC0.83□□□□□ -2.28
Lima1Q9ERG0 AC154484.1-201ENSMUST00000227311 771 ntBASIC0.83□□□□□ -2.28
Lima1Q9ERG0 Snord35a-201ENSMUST00000083884 90 ntBASIC0.83□□□□□ -2.28
Lima1Q9ERG0 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
Lima1Q9ERG0 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC0.82□□□□□ -2.28
Lima1Q9ERG0 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
Lima1Q9ERG0 Mir293-201ENSMUST00000104841 80 ntBASIC0.82□□□□□ -2.28
Lima1Q9ERG0 Snord98-201ENSMUST00000116819 65 ntBASIC0.82□□□□□ -2.28
Lima1Q9ERG0 Gm14293-201ENSMUST00000118528 577 ntBASIC0.82□□□□□ -2.28
Lima1Q9ERG0 Gm14269-201ENSMUST00000120455 306 ntBASIC0.82□□□□□ -2.28
Lima1Q9ERG0 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
Lima1Q9ERG0 Gm22551-201ENSMUST00000157795 103 ntBASIC0.82□□□□□ -2.28
Lima1Q9ERG0 Gm25715-201ENSMUST00000158627 125 ntBASIC0.82□□□□□ -2.28
Lima1Q9ERG0 Mir3061-201ENSMUST00000175129 91 ntBASIC0.82□□□□□ -2.28
Lima1Q9ERG0 Gm24085-201ENSMUST00000175172 116 ntBASIC0.82□□□□□ -2.28
Lima1Q9ERG0 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC0.82□□□□□ -2.28
Lima1Q9ERG0 Gm27587-201ENSMUST00000185116 163 ntBASIC0.82□□□□□ -2.28
Lima1Q9ERG0 AC116589.9-201ENSMUST00000221462 908 ntBASIC0.82□□□□□ -2.28
Lima1Q9ERG0 AC163295.1-201ENSMUST00000227840 314 ntBASIC0.82□□□□□ -2.28
Lima1Q9ERG0 Gm25801-201ENSMUST00000082638 106 ntBASIC0.82□□□□□ -2.28
Lima1Q9ERG0 AC121844.2-201ENSMUST00000219067 2066 ntBASIC0.81□□□□□ -2.28
Lima1Q9ERG0 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.81□□□□□ -2.28
Lima1Q9ERG0 Gm14287-201ENSMUST00000121060 117 ntBASIC0.81□□□□□ -2.28
Lima1Q9ERG0 Gm23016-201ENSMUST00000158431 62 ntBASIC0.81□□□□□ -2.28
Lima1Q9ERG0 Gm3027-201ENSMUST00000167579 451 ntBASIC0.81□□□□□ -2.28
Lima1Q9ERG0 Gm24308-201ENSMUST00000177773 114 ntBASIC0.81□□□□□ -2.28
Lima1Q9ERG0 Mir7059-201ENSMUST00000184825 59 ntBASIC0.81□□□□□ -2.28
Lima1Q9ERG0 Gm28597-201ENSMUST00000187664 666 ntBASIC0.81□□□□□ -2.28
Lima1Q9ERG0 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC0.81□□□□□ -2.28
Lima1Q9ERG0 Gm19855-201ENSMUST00000210145 249 ntBASIC0.81□□□□□ -2.28
Lima1Q9ERG0 AC117202.2-201ENSMUST00000226491 1101 ntBASIC0.81□□□□□ -2.28
Lima1Q9ERG0 AC151833.1-201ENSMUST00000227752 574 ntBASIC0.81□□□□□ -2.28
Lima1Q9ERG0 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.81□□□□□ -2.28
Lima1Q9ERG0 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
Lima1Q9ERG0 Gm42755-201ENSMUST00000198533 1493 ntBASIC0.8□□□□□ -2.28
Lima1Q9ERG0 Gm11254-201ENSMUST00000122368 653 ntBASIC0.8□□□□□ -2.28
Lima1Q9ERG0 Gm22281-201ENSMUST00000157198 103 ntBASIC0.8□□□□□ -2.28
Lima1Q9ERG0 Gm27755-201ENSMUST00000184623 132 ntBASIC0.8□□□□□ -2.28
Lima1Q9ERG0 Gm29013-201ENSMUST00000187431 237 ntBASIC0.8□□□□□ -2.28
Lima1Q9ERG0 Gm38323-201ENSMUST00000192450 210 ntBASIC0.8□□□□□ -2.28
Lima1Q9ERG0 Gm9251-201ENSMUST00000197202 628 ntBASIC0.8□□□□□ -2.28
Lima1Q9ERG0 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC0.8□□□□□ -2.28
Lima1Q9ERG0 AC100209.2-201ENSMUST00000224461 451 ntBASIC0.8□□□□□ -2.28
Lima1Q9ERG0 Mir27b-201ENSMUST00000083541 73 ntBASIC0.8□□□□□ -2.28
Lima1Q9ERG0 Gm12080-201ENSMUST00000119821 1883 ntBASIC0.8□□□□□ -2.28
Lima1Q9ERG0 Gm26500-201ENSMUST00000101867 106 ntBASIC0.79□□□□□ -2.28
Lima1Q9ERG0 Gm26339-201ENSMUST00000102368 99 ntBASIC0.79□□□□□ -2.28
Lima1Q9ERG0 Gm22935-201ENSMUST00000103960 104 ntBASIC0.79□□□□□ -2.28
Lima1Q9ERG0 Gm13729-201ENSMUST00000120328 406 ntBASIC0.79□□□□□ -2.28
Lima1Q9ERG0 Gm13967-201ENSMUST00000120404 380 ntBASIC0.79□□□□□ -2.28
Lima1Q9ERG0 Gm22228-201ENSMUST00000157364 101 ntBASIC0.79□□□□□ -2.28
Lima1Q9ERG0 Gm23328-201ENSMUST00000157418 132 ntBASIC0.79□□□□□ -2.28
Lima1Q9ERG0 Gm25663-201ENSMUST00000157698 135 ntBASIC0.79□□□□□ -2.28
Lima1Q9ERG0 Gm26004-201ENSMUST00000158804 116 ntBASIC0.79□□□□□ -2.28
Lima1Q9ERG0 Gm37128-201ENSMUST00000192599 232 ntBASIC0.79□□□□□ -2.28
Lima1Q9ERG0 Gm26379-202ENSMUST00000200225 132 ntBASIC0.79□□□□□ -2.28
Lima1Q9ERG0 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.79□□□□□ -2.28
Lima1Q9ERG0 Gm24625-201ENSMUST00000082622 130 ntBASIC0.79□□□□□ -2.28
Lima1Q9ERG0 Gm25414-201ENSMUST00000101814 107 ntBASIC0.78□□□□□ -2.28
Lima1Q9ERG0 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
Lima1Q9ERG0 Mir1b-201ENSMUST00000117012 122 ntBASIC0.78□□□□□ -2.28
Lima1Q9ERG0 Gm23435-201ENSMUST00000157183 156 ntBASIC0.78□□□□□ -2.28
Lima1Q9ERG0 Gm25314-201ENSMUST00000178810 79 ntBASIC0.78□□□□□ -2.28
Lima1Q9ERG0 Gm23714-201ENSMUST00000179259 105 ntBASIC0.78□□□□□ -2.28
Lima1Q9ERG0 Gm27313-201ENSMUST00000183500 142 ntBASIC0.78□□□□□ -2.28
Lima1Q9ERG0 Mir7663-201ENSMUST00000183950 61 ntBASIC0.78□□□□□ -2.28
Lima1Q9ERG0 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC0.78□□□□□ -2.28
Lima1Q9ERG0 Gm37399-201ENSMUST00000195224 416 ntBASIC0.78□□□□□ -2.28
Lima1Q9ERG0 Gm45402-201ENSMUST00000211796 223 ntBASIC0.78□□□□□ -2.28
Lima1Q9ERG0 AC125020.2-201ENSMUST00000218894 348 ntBASIC0.78□□□□□ -2.28
Lima1Q9ERG0 AC173345.2-201ENSMUST00000222795 153 ntBASIC0.78□□□□□ -2.28
Lima1Q9ERG0 AC183092.1-201ENSMUST00000224301 153 ntBASIC0.78□□□□□ -2.28
Lima1Q9ERG0 Gm11351-202ENSMUST00000225724 478 ntBASIC0.78□□□□□ -2.28
Lima1Q9ERG0 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
Lima1Q9ERG0 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
Lima1Q9ERG0 Gm14917-201ENSMUST00000118872 2105 ntBASIC0.77□□□□□ -2.29
Lima1Q9ERG0 Gm4746-201ENSMUST00000120395 2406 ntBASIC0.77□□□□□ -2.29
Lima1Q9ERG0 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
Lima1Q9ERG0 Gm23766-201ENSMUST00000103894 80 ntBASIC0.77□□□□□ -2.29
Lima1Q9ERG0 Gm11386-201ENSMUST00000117761 347 ntBASIC0.77□□□□□ -2.29
Lima1Q9ERG0 Gm14392-201ENSMUST00000120332 401 ntBASIC0.77□□□□□ -2.29
Lima1Q9ERG0 Gm13720-201ENSMUST00000120741 196 ntBASIC0.77□□□□□ -2.29
Lima1Q9ERG0 Gm14413-201ENSMUST00000122158 408 ntBASIC0.77□□□□□ -2.29
Lima1Q9ERG0 Gm2962-201ENSMUST00000159266 336 ntBASIC0.77□□□□□ -2.29
Lima1Q9ERG0 Gm17067-202ENSMUST00000180131 123 ntBASIC0.77□□□□□ -2.29
Lima1Q9ERG0 Gm27793-201ENSMUST00000183405 76 ntBASIC0.77□□□□□ -2.29
Lima1Q9ERG0 Gm27271-201ENSMUST00000183509 170 ntBASIC0.77□□□□□ -2.29
Lima1Q9ERG0 Gm28257-201ENSMUST00000185244 463 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 102.2 ms