Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Upf1Q9EPU0 Gm12213-201ENSMUST00000119924 353 ntBASIC3.29□□□□□ -1.88
Upf1Q9EPU0 Gm16355-201ENSMUST00000128606 231 ntBASIC3.29□□□□□ -1.88
Upf1Q9EPU0 Gm24291-201ENSMUST00000157633 162 ntBASIC3.29□□□□□ -1.88
Upf1Q9EPU0 Gm17161-201ENSMUST00000169187 524 ntBASIC3.29□□□□□ -1.88
Upf1Q9EPU0 Mir7039-201ENSMUST00000183852 85 ntBASIC3.29□□□□□ -1.88
Upf1Q9EPU0 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC3.29□□□□□ -1.88
Upf1Q9EPU0 Gm11351-202ENSMUST00000225724 478 ntBASIC3.29□□□□□ -1.88
Upf1Q9EPU0 Mir302d-201ENSMUST00000083513 66 ntBASIC3.29□□□□□ -1.88
Upf1Q9EPU0 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Upf1Q9EPU0 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Upf1Q9EPU0 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Upf1Q9EPU0 Gm37063-201ENSMUST00000194678 3520 ntBASIC3.28□□□□□ -1.88
Upf1Q9EPU0 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Upf1Q9EPU0 Gm25466-201ENSMUST00000103995 132 ntBASIC3.28□□□□□ -1.88
Upf1Q9EPU0 Gm23183-201ENSMUST00000122595 323 ntBASIC3.28□□□□□ -1.88
Upf1Q9EPU0 Gm22483-201ENSMUST00000157986 274 ntBASIC3.28□□□□□ -1.88
Upf1Q9EPU0 Gm24001-201ENSMUST00000158463 85 ntBASIC3.28□□□□□ -1.88
Upf1Q9EPU0 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Upf1Q9EPU0 Gm27369-201ENSMUST00000185182 71 ntBASIC3.28□□□□□ -1.88
Upf1Q9EPU0 Gm18433-202ENSMUST00000195682 196 ntBASIC3.28□□□□□ -1.88
Upf1Q9EPU0 Gm33866-201ENSMUST00000196911 289 ntBASIC3.28□□□□□ -1.88
Upf1Q9EPU0 Gm25130-201ENSMUST00000082650 156 ntBASIC3.28□□□□□ -1.88
Upf1Q9EPU0 Mir184-201ENSMUST00000083662 69 ntBASIC3.28□□□□□ -1.88
Upf1Q9EPU0 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
Upf1Q9EPU0 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Upf1Q9EPU0 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Upf1Q9EPU0 Gm13801-201ENSMUST00000120750 160 ntBASIC3.27□□□□□ -1.89
Upf1Q9EPU0 Gm23980-201ENSMUST00000157135 158 ntBASIC3.27□□□□□ -1.89
Upf1Q9EPU0 Gm23381-201ENSMUST00000157676 94 ntBASIC3.27□□□□□ -1.89
Upf1Q9EPU0 Gm25888-201ENSMUST00000157778 302 ntBASIC3.27□□□□□ -1.89
Upf1Q9EPU0 Gm23209-201ENSMUST00000158667 110 ntBASIC3.27□□□□□ -1.89
Upf1Q9EPU0 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC3.27□□□□□ -1.89
Upf1Q9EPU0 Gm24453-201ENSMUST00000083346 76 ntBASIC3.27□□□□□ -1.89
Upf1Q9EPU0 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Upf1Q9EPU0 Gm15303-201ENSMUST00000118676 2624 ntBASIC3.26□□□□□ -1.89
Upf1Q9EPU0 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Upf1Q9EPU0 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC3.26□□□□□ -1.89
Upf1Q9EPU0 Gm23548-201ENSMUST00000158963 106 ntBASIC3.26□□□□□ -1.89
Upf1Q9EPU0 AC160863.1-201ENSMUST00000218412 317 ntBASIC3.26□□□□□ -1.89
Upf1Q9EPU0 Gm26493-201ENSMUST00000083155 136 ntBASIC3.26□□□□□ -1.89
Upf1Q9EPU0 Gm10212-201ENSMUST00000087884 324 ntBASIC3.26□□□□□ -1.89
Upf1Q9EPU0 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
Upf1Q9EPU0 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Upf1Q9EPU0 AC153964.2-201ENSMUST00000217704 2474 ntBASIC3.25□□□□□ -1.89
Upf1Q9EPU0 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Upf1Q9EPU0 Gm25538-201ENSMUST00000101943 107 ntBASIC3.25□□□□□ -1.89
Upf1Q9EPU0 Mir374b-201ENSMUST00000102314 95 ntBASIC3.25□□□□□ -1.89
Upf1Q9EPU0 Mir344e-201ENSMUST00000104677 66 ntBASIC3.25□□□□□ -1.89
Upf1Q9EPU0 Gm15861-201ENSMUST00000120979 339 ntBASIC3.25□□□□□ -1.89
Upf1Q9EPU0 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.25□□□□□ -1.89
Upf1Q9EPU0 Mir721-201ENSMUST00000200230 88 ntBASIC3.25□□□□□ -1.89
Upf1Q9EPU0 Gm43264-201ENSMUST00000202284 325 ntBASIC3.25□□□□□ -1.89
Upf1Q9EPU0 Gm5002-201ENSMUST00000207145 223 ntBASIC3.25□□□□□ -1.89
Upf1Q9EPU0 AC164086.1-201ENSMUST00000221038 289 ntBASIC3.25□□□□□ -1.89
Upf1Q9EPU0 AC154328.1-201ENSMUST00000225875 307 ntBASIC3.25□□□□□ -1.89
Upf1Q9EPU0 AC123860.1-201ENSMUST00000228033 481 ntBASIC3.25□□□□□ -1.89
Upf1Q9EPU0 Gm25142-201ENSMUST00000082698 107 ntBASIC3.25□□□□□ -1.89
Upf1Q9EPU0 Gm22421-201ENSMUST00000083058 107 ntBASIC3.25□□□□□ -1.89
Upf1Q9EPU0 Gm26126-201ENSMUST00000083188 164 ntBASIC3.25□□□□□ -1.89
Upf1Q9EPU0 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC3.25□□□□□ -1.89
Upf1Q9EPU0 Gm13136-201ENSMUST00000121031 2950 ntBASIC3.25□□□□□ -1.89
Upf1Q9EPU0 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Upf1Q9EPU0 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.25□□□□□ -1.89
Upf1Q9EPU0 Gm37566-201ENSMUST00000192363 4355 ntBASIC3.25□□□□□ -1.89
Upf1Q9EPU0 AC125374.3-201ENSMUST00000214983 2810 ntBASIC3.24□□□□□ -1.89
Upf1Q9EPU0 Gm23010-201ENSMUST00000104151 126 ntBASIC3.24□□□□□ -1.89
Upf1Q9EPU0 Gm25069-201ENSMUST00000175238 86 ntBASIC3.24□□□□□ -1.89
Upf1Q9EPU0 Mir5123-201ENSMUST00000177794 83 ntBASIC3.24□□□□□ -1.89
Upf1Q9EPU0 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.24□□□□□ -1.89
Upf1Q9EPU0 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC3.24□□□□□ -1.89
Upf1Q9EPU0 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC3.24□□□□□ -1.89
Upf1Q9EPU0 Mir3087-201ENSMUST00000199405 56 ntBASIC3.24□□□□□ -1.89
Upf1Q9EPU0 Gm43199-201ENSMUST00000200019 307 ntBASIC3.24□□□□□ -1.89
Upf1Q9EPU0 Gm44408-201ENSMUST00000200205 66 ntBASIC3.24□□□□□ -1.89
Upf1Q9EPU0 Gm36189-201ENSMUST00000204113 523 ntBASIC3.24□□□□□ -1.89
Upf1Q9EPU0 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.24□□□□□ -1.89
Upf1Q9EPU0 Gm7214-201ENSMUST00000222428 272 ntBASIC3.24□□□□□ -1.89
Upf1Q9EPU0 Gm25204-201ENSMUST00000082843 106 ntBASIC3.24□□□□□ -1.89
Upf1Q9EPU0 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Upf1Q9EPU0 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Upf1Q9EPU0 Gm1980-201ENSMUST00000123131 2306 ntBASIC3.24□□□□□ -1.89
Upf1Q9EPU0 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Upf1Q9EPU0 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC3.23□□□□□ -1.89
Upf1Q9EPU0 Gm24598-201ENSMUST00000122510 74 ntBASIC3.23□□□□□ -1.89
Upf1Q9EPU0 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.23□□□□□ -1.89
Upf1Q9EPU0 Gm23350-201ENSMUST00000158429 103 ntBASIC3.23□□□□□ -1.89
Upf1Q9EPU0 Gm26405-201ENSMUST00000158495 100 ntBASIC3.23□□□□□ -1.89
Upf1Q9EPU0 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC3.23□□□□□ -1.89
Upf1Q9EPU0 Gm20613-201ENSMUST00000175828 345 ntBASIC3.23□□□□□ -1.89
Upf1Q9EPU0 Snord80-202ENSMUST00000199023 77 ntBASIC3.23□□□□□ -1.89
Upf1Q9EPU0 AC124104.1-201ENSMUST00000226279 417 ntBASIC3.23□□□□□ -1.89
Upf1Q9EPU0 Gm23738-201ENSMUST00000082828 171 ntBASIC3.23□□□□□ -1.89
Upf1Q9EPU0 Gm25895-201ENSMUST00000083714 100 ntBASIC3.23□□□□□ -1.89
Upf1Q9EPU0 Gm2869-201ENSMUST00000124359 2621 ntBASIC3.23□□□□□ -1.89
Upf1Q9EPU0 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.22□□□□□ -1.89
Upf1Q9EPU0 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Upf1Q9EPU0 Gm38162-201ENSMUST00000195562 4597 ntBASIC3.22□□□□□ -1.89
Upf1Q9EPU0 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Upf1Q9EPU0 Gm26099-201ENSMUST00000157248 109 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms