Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Mir1967-201ENSMUST00000157789 82 ntBASIC1.12□□□□□ -2.23
Cdc40Q9DC48 Gm2962-201ENSMUST00000159266 336 ntBASIC1.12□□□□□ -2.23
Cdc40Q9DC48 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.12□□□□□ -2.23
Cdc40Q9DC48 Gm24487-201ENSMUST00000178017 63 ntBASIC1.12□□□□□ -2.23
Cdc40Q9DC48 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.12□□□□□ -2.23
Cdc40Q9DC48 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.12□□□□□ -2.23
Cdc40Q9DC48 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.12□□□□□ -2.23
Cdc40Q9DC48 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.12□□□□□ -2.23
Cdc40Q9DC48 AC162857.1-201ENSMUST00000226614 400 ntBASIC1.12□□□□□ -2.23
Cdc40Q9DC48 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
Cdc40Q9DC48 Snord68-201ENSMUST00000082516 86 ntBASIC1.12□□□□□ -2.23
Cdc40Q9DC48 Gm25409-201ENSMUST00000083764 131 ntBASIC1.12□□□□□ -2.23
Cdc40Q9DC48 Gm3867-201ENSMUST00000086108 279 ntBASIC1.12□□□□□ -2.23
Cdc40Q9DC48 Mir701-201ENSMUST00000102208 109 ntBASIC1.11□□□□□ -2.23
Cdc40Q9DC48 Gm11862-201ENSMUST00000119678 659 ntBASIC1.11□□□□□ -2.23
Cdc40Q9DC48 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
Cdc40Q9DC48 Gm25768-201ENSMUST00000158570 98 ntBASIC1.11□□□□□ -2.23
Cdc40Q9DC48 Gm26029-201ENSMUST00000158659 132 ntBASIC1.11□□□□□ -2.23
Cdc40Q9DC48 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
Cdc40Q9DC48 Gm16399-201ENSMUST00000181423 219 ntBASIC1.11□□□□□ -2.23
Cdc40Q9DC48 Gm27271-201ENSMUST00000183509 170 ntBASIC1.11□□□□□ -2.23
Cdc40Q9DC48 Mir7063-201ENSMUST00000184158 91 ntBASIC1.11□□□□□ -2.23
Cdc40Q9DC48 Gm42774-201ENSMUST00000198854 283 ntBASIC1.11□□□□□ -2.23
Cdc40Q9DC48 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.11□□□□□ -2.23
Cdc40Q9DC48 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.1□□□□□ -2.23
Cdc40Q9DC48 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 Gm15214-201ENSMUST00000122155 470 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 Gm26038-201ENSMUST00000158151 106 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 Gm25491-201ENSMUST00000158733 308 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 Gm28110-201ENSMUST00000185782 315 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 Gm29057-201ENSMUST00000186468 315 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 Gm28737-201ENSMUST00000186808 315 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 Gm29147-201ENSMUST00000186846 315 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 Gm29118-201ENSMUST00000186908 315 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 Gm28409-201ENSMUST00000187064 103 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 Gm28433-201ENSMUST00000187085 315 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 Gm29227-201ENSMUST00000187139 315 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 Gm28759-201ENSMUST00000187621 315 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 Gm28831-201ENSMUST00000187739 315 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 Gm29034-201ENSMUST00000188099 315 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 Gm28752-201ENSMUST00000188340 315 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 Gm28569-201ENSMUST00000188748 315 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 Gm28120-201ENSMUST00000188812 315 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 Gm28369-201ENSMUST00000188993 315 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 Gm28537-201ENSMUST00000189026 315 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 Gm28861-201ENSMUST00000189681 315 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 Gm28717-201ENSMUST00000189950 315 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 Gm29180-201ENSMUST00000190003 315 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 Gm29575-201ENSMUST00000190597 315 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 Gm18291-201ENSMUST00000190791 301 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 Gm29631-201ENSMUST00000191065 315 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 Gm28160-201ENSMUST00000191229 315 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 Gm29469-201ENSMUST00000191448 315 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 Gm37129-201ENSMUST00000195791 315 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 Gm45456-201ENSMUST00000210841 243 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 Gm18188-201ENSMUST00000219386 478 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 AC126554.1-201ENSMUST00000222161 271 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 AC100209.2-201ENSMUST00000224461 451 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 Gm22980-201ENSMUST00000082608 70 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 Gm24355-201ENSMUST00000082858 122 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 Gm25038-201ENSMUST00000082928 130 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 AC121844.2-201ENSMUST00000219067 2066 ntBASIC1.1□□□□□ -2.23
Cdc40Q9DC48 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Cdc40Q9DC48 Mir544-201ENSMUST00000103813 78 ntBASIC1.09□□□□□ -2.23
Cdc40Q9DC48 Gm22673-201ENSMUST00000104415 131 ntBASIC1.09□□□□□ -2.23
Cdc40Q9DC48 Gm12433-201ENSMUST00000119659 255 ntBASIC1.09□□□□□ -2.23
Cdc40Q9DC48 Gm22555-201ENSMUST00000157801 62 ntBASIC1.09□□□□□ -2.23
Cdc40Q9DC48 Gm22164-201ENSMUST00000158413 106 ntBASIC1.09□□□□□ -2.23
Cdc40Q9DC48 Gm22129-201ENSMUST00000179034 107 ntBASIC1.09□□□□□ -2.23
Cdc40Q9DC48 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.09□□□□□ -2.23
Cdc40Q9DC48 Gm44960-201ENSMUST00000207403 141 ntBASIC1.09□□□□□ -2.23
Cdc40Q9DC48 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC1.09□□□□□ -2.23
Cdc40Q9DC48 AC131720.2-201ENSMUST00000220420 431 ntBASIC1.09□□□□□ -2.23
Cdc40Q9DC48 AC163295.1-201ENSMUST00000227840 314 ntBASIC1.09□□□□□ -2.23
Cdc40Q9DC48 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.09□□□□□ -2.23
Cdc40Q9DC48 Gm26301-201ENSMUST00000104813 95 ntBASIC1.08□□□□□ -2.24
Cdc40Q9DC48 Gm11254-201ENSMUST00000122368 653 ntBASIC1.08□□□□□ -2.24
Cdc40Q9DC48 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.08□□□□□ -2.24
Cdc40Q9DC48 Gm25909-201ENSMUST00000157619 121 ntBASIC1.08□□□□□ -2.24
Cdc40Q9DC48 Gm24853-201ENSMUST00000158026 121 ntBASIC1.08□□□□□ -2.24
Cdc40Q9DC48 Gm22435-201ENSMUST00000158552 128 ntBASIC1.08□□□□□ -2.24
Cdc40Q9DC48 Gm24810-201ENSMUST00000175317 70 ntBASIC1.08□□□□□ -2.24
Cdc40Q9DC48 Gm23660-201ENSMUST00000178362 79 ntBASIC1.08□□□□□ -2.24
Cdc40Q9DC48 Gm24088-201ENSMUST00000179100 79 ntBASIC1.08□□□□□ -2.24
Cdc40Q9DC48 Gm23191-201ENSMUST00000179147 107 ntBASIC1.08□□□□□ -2.24
Cdc40Q9DC48 Mir6346-201ENSMUST00000183982 81 ntBASIC1.08□□□□□ -2.24
Cdc40Q9DC48 Gm27421-201ENSMUST00000184729 167 ntBASIC1.08□□□□□ -2.24
Cdc40Q9DC48 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.08□□□□□ -2.24
Cdc40Q9DC48 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC1.08□□□□□ -2.24
Cdc40Q9DC48 Gm45704-201ENSMUST00000212582 403 ntBASIC1.08□□□□□ -2.24
Cdc40Q9DC48 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Cdc40Q9DC48 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Cdc40Q9DC48 Mir448-201ENSMUST00000083516 112 ntBASIC1.08□□□□□ -2.24
Cdc40Q9DC48 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.08□□□□□ -2.24
Cdc40Q9DC48 Gm4746-201ENSMUST00000120395 2406 ntBASIC1.07□□□□□ -2.24
Cdc40Q9DC48 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.07□□□□□ -2.24
Cdc40Q9DC48 Gm11859-201ENSMUST00000118099 455 ntBASIC1.07□□□□□ -2.24
Cdc40Q9DC48 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC1.07□□□□□ -2.24
Cdc40Q9DC48 Gm24499-201ENSMUST00000158446 104 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms