Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm37399-201ENSMUST00000195224 416 ntBASIC0.84□□□□□ -2.27
Chmp2aQ9DB34 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC0.84□□□□□ -2.27
Chmp2aQ9DB34 Gm42533-201ENSMUST00000196247 157 ntBASIC0.84□□□□□ -2.27
Chmp2aQ9DB34 Gm45403-201ENSMUST00000209453 276 ntBASIC0.84□□□□□ -2.27
Chmp2aQ9DB34 AC162387.1-201ENSMUST00000213369 213 ntBASIC0.84□□□□□ -2.27
Chmp2aQ9DB34 AC120394.1-201ENSMUST00000217153 351 ntBASIC0.84□□□□□ -2.27
Chmp2aQ9DB34 AC192333.2-201ENSMUST00000224771 196 ntBASIC0.84□□□□□ -2.27
Chmp2aQ9DB34 Gm9795-201ENSMUST00000062156 693 ntBASIC0.84□□□□□ -2.27
Chmp2aQ9DB34 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC0.84□□□□□ -2.27
Chmp2aQ9DB34 Mir872-201ENSMUST00000104728 81 ntBASIC0.83□□□□□ -2.28
Chmp2aQ9DB34 Defb44-ps-201ENSMUST00000126871 219 ntBASIC0.83□□□□□ -2.28
Chmp2aQ9DB34 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC0.83□□□□□ -2.28
Chmp2aQ9DB34 Gm25884-201ENSMUST00000157782 62 ntBASIC0.83□□□□□ -2.28
Chmp2aQ9DB34 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.83□□□□□ -2.28
Chmp2aQ9DB34 Mir1954-201ENSMUST00000175595 86 ntBASIC0.83□□□□□ -2.28
Chmp2aQ9DB34 Gm20630-201ENSMUST00000177387 551 ntBASIC0.83□□□□□ -2.28
Chmp2aQ9DB34 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.83□□□□□ -2.28
Chmp2aQ9DB34 Gm37801-201ENSMUST00000194754 274 ntBASIC0.83□□□□□ -2.28
Chmp2aQ9DB34 AC116589.9-201ENSMUST00000221462 908 ntBASIC0.83□□□□□ -2.28
Chmp2aQ9DB34 Snord68-201ENSMUST00000082516 86 ntBASIC0.83□□□□□ -2.28
Chmp2aQ9DB34 Gm22306-201ENSMUST00000082692 107 ntBASIC0.83□□□□□ -2.28
Chmp2aQ9DB34 Gm25851-201ENSMUST00000082794 107 ntBASIC0.83□□□□□ -2.28
Chmp2aQ9DB34 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC0.83□□□□□ -2.28
Chmp2aQ9DB34 Gm45557-201ENSMUST00000210004 1651 ntBASIC0.82□□□□□ -2.28
Chmp2aQ9DB34 Gm24409-201ENSMUST00000157881 152 ntBASIC0.82□□□□□ -2.28
Chmp2aQ9DB34 Gm18588-201ENSMUST00000177308 492 ntBASIC0.82□□□□□ -2.28
Chmp2aQ9DB34 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC0.82□□□□□ -2.28
Chmp2aQ9DB34 Gm44358-201ENSMUST00000196301 98 ntBASIC0.82□□□□□ -2.28
Chmp2aQ9DB34 Gm11351-202ENSMUST00000225724 478 ntBASIC0.82□□□□□ -2.28
Chmp2aQ9DB34 AC112972.1-201ENSMUST00000227329 365 ntBASIC0.82□□□□□ -2.28
Chmp2aQ9DB34 AC170600.1-201ENSMUST00000228763 277 ntBASIC0.82□□□□□ -2.28
Chmp2aQ9DB34 Gm24038-201ENSMUST00000082872 159 ntBASIC0.82□□□□□ -2.28
Chmp2aQ9DB34 Gm25859-201ENSMUST00000083710 91 ntBASIC0.82□□□□□ -2.28
Chmp2aQ9DB34 Gm24261-201ENSMUST00000083744 104 ntBASIC0.82□□□□□ -2.28
Chmp2aQ9DB34 Gm22689-201ENSMUST00000102452 110 ntBASIC0.81□□□□□ -2.28
Chmp2aQ9DB34 Gm12255-201ENSMUST00000117184 284 ntBASIC0.81□□□□□ -2.28
Chmp2aQ9DB34 Gm26424-201ENSMUST00000122530 104 ntBASIC0.81□□□□□ -2.28
Chmp2aQ9DB34 Gm25011-201ENSMUST00000158398 126 ntBASIC0.81□□□□□ -2.28
Chmp2aQ9DB34 Gm23114-201ENSMUST00000158478 117 ntBASIC0.81□□□□□ -2.28
Chmp2aQ9DB34 Gm23340-201ENSMUST00000158955 123 ntBASIC0.81□□□□□ -2.28
Chmp2aQ9DB34 Snora24-201ENSMUST00000174989 130 ntBASIC0.81□□□□□ -2.28
Chmp2aQ9DB34 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.81□□□□□ -2.28
Chmp2aQ9DB34 Gm25121-201ENSMUST00000179846 79 ntBASIC0.81□□□□□ -2.28
Chmp2aQ9DB34 Gm27271-201ENSMUST00000183509 170 ntBASIC0.81□□□□□ -2.28
Chmp2aQ9DB34 Gm27420-201ENSMUST00000183823 79 ntBASIC0.81□□□□□ -2.28
Chmp2aQ9DB34 Mir6540-201ENSMUST00000184886 108 ntBASIC0.81□□□□□ -2.28
Chmp2aQ9DB34 Gm5034-201ENSMUST00000199115 634 ntBASIC0.81□□□□□ -2.28
Chmp2aQ9DB34 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC0.81□□□□□ -2.28
Chmp2aQ9DB34 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.81□□□□□ -2.28
Chmp2aQ9DB34 AC147101.1-201ENSMUST00000217964 312 ntBASIC0.81□□□□□ -2.28
Chmp2aQ9DB34 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.81□□□□□ -2.28
Chmp2aQ9DB34 Gm26500-201ENSMUST00000101867 106 ntBASIC0.8□□□□□ -2.28
Chmp2aQ9DB34 n-R5s188-201ENSMUST00000122646 105 ntBASIC0.8□□□□□ -2.28
Chmp2aQ9DB34 Gm24901-201ENSMUST00000158125 110 ntBASIC0.8□□□□□ -2.28
Chmp2aQ9DB34 Gm22802-201ENSMUST00000175621 89 ntBASIC0.8□□□□□ -2.28
Chmp2aQ9DB34 Gm29022-201ENSMUST00000190702 225 ntBASIC0.8□□□□□ -2.28
Chmp2aQ9DB34 Gm37918-201ENSMUST00000192071 120 ntBASIC0.8□□□□□ -2.28
Chmp2aQ9DB34 Gm44301-201ENSMUST00000200362 143 ntBASIC0.8□□□□□ -2.28
Chmp2aQ9DB34 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC0.8□□□□□ -2.28
Chmp2aQ9DB34 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC0.8□□□□□ -2.28
Chmp2aQ9DB34 AC130821.1-201ENSMUST00000221997 293 ntBASIC0.8□□□□□ -2.28
Chmp2aQ9DB34 AC144733.1-201ENSMUST00000222893 1289 ntBASIC0.8□□□□□ -2.28
Chmp2aQ9DB34 Gm24625-201ENSMUST00000082622 130 ntBASIC0.8□□□□□ -2.28
Chmp2aQ9DB34 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
Chmp2aQ9DB34 Gm4746-201ENSMUST00000120395 2406 ntBASIC0.79□□□□□ -2.28
Chmp2aQ9DB34 Gm22834-201ENSMUST00000102021 79 ntBASIC0.79□□□□□ -2.28
Chmp2aQ9DB34 Gm25109-201ENSMUST00000122474 114 ntBASIC0.79□□□□□ -2.28
Chmp2aQ9DB34 Gm22279-201ENSMUST00000157200 93 ntBASIC0.79□□□□□ -2.28
Chmp2aQ9DB34 Gm42719-201ENSMUST00000197393 355 ntBASIC0.79□□□□□ -2.28
Chmp2aQ9DB34 AC125167.1-201ENSMUST00000198698 141 ntBASIC0.79□□□□□ -2.28
Chmp2aQ9DB34 Gm44396-201ENSMUST00000199843 114 ntBASIC0.79□□□□□ -2.28
Chmp2aQ9DB34 Gm43898-201ENSMUST00000204456 424 ntBASIC0.79□□□□□ -2.28
Chmp2aQ9DB34 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.79□□□□□ -2.28
Chmp2aQ9DB34 AC173345.2-201ENSMUST00000222795 153 ntBASIC0.79□□□□□ -2.28
Chmp2aQ9DB34 AC183092.1-201ENSMUST00000224301 153 ntBASIC0.79□□□□□ -2.28
Chmp2aQ9DB34 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
Chmp2aQ9DB34 Snord71-201ENSMUST00000104361 85 ntBASIC0.78□□□□□ -2.28
Chmp2aQ9DB34 Gm25507-201ENSMUST00000116981 144 ntBASIC0.78□□□□□ -2.28
Chmp2aQ9DB34 Mir1b-201ENSMUST00000117012 122 ntBASIC0.78□□□□□ -2.28
Chmp2aQ9DB34 Gm13729-201ENSMUST00000120328 406 ntBASIC0.78□□□□□ -2.28
Chmp2aQ9DB34 Gm23212-201ENSMUST00000122718 60 ntBASIC0.78□□□□□ -2.28
Chmp2aQ9DB34 Gm24401-201ENSMUST00000157868 91 ntBASIC0.78□□□□□ -2.28
Chmp2aQ9DB34 Gm24308-201ENSMUST00000177773 114 ntBASIC0.78□□□□□ -2.28
Chmp2aQ9DB34 Gm27793-201ENSMUST00000183405 76 ntBASIC0.78□□□□□ -2.28
Chmp2aQ9DB34 Gm27545-201ENSMUST00000184755 202 ntBASIC0.78□□□□□ -2.28
Chmp2aQ9DB34 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC0.78□□□□□ -2.28
Chmp2aQ9DB34 AC100209.2-201ENSMUST00000224461 451 ntBASIC0.78□□□□□ -2.28
Chmp2aQ9DB34 Gm25650-201ENSMUST00000083784 162 ntBASIC0.78□□□□□ -2.28
Chmp2aQ9DB34 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
Chmp2aQ9DB34 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
Chmp2aQ9DB34 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
Chmp2aQ9DB34 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC0.77□□□□□ -2.29
Chmp2aQ9DB34 Gm24005-201ENSMUST00000158459 296 ntBASIC0.77□□□□□ -2.29
Chmp2aQ9DB34 Gm25901-201ENSMUST00000158494 130 ntBASIC0.77□□□□□ -2.29
Chmp2aQ9DB34 Gm25976-201ENSMUST00000158695 130 ntBASIC0.77□□□□□ -2.29
Chmp2aQ9DB34 Gm23355-201ENSMUST00000177614 107 ntBASIC0.77□□□□□ -2.29
Chmp2aQ9DB34 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC0.77□□□□□ -2.29
Chmp2aQ9DB34 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC0.77□□□□□ -2.29
Chmp2aQ9DB34 Gm5001-201ENSMUST00000204361 331 ntBASIC0.77□□□□□ -2.29
Chmp2aQ9DB34 Gm18113-201ENSMUST00000220630 303 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 137.2 ms