Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm23731-201ENSMUST00000083749 107 ntBASIC0.88□□□□□ -2.27
Ccdc3Q9D6Y1 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
Ccdc3Q9D6Y1 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC0.87□□□□□ -2.27
Ccdc3Q9D6Y1 Gm10730-201ENSMUST00000194097 2723 ntBASIC0.87□□□□□ -2.27
Ccdc3Q9D6Y1 Gm26074-201ENSMUST00000104063 129 ntBASIC0.87□□□□□ -2.27
Ccdc3Q9D6Y1 Gm22785-201ENSMUST00000104087 132 ntBASIC0.87□□□□□ -2.27
Ccdc3Q9D6Y1 Gm12255-201ENSMUST00000117184 284 ntBASIC0.87□□□□□ -2.27
Ccdc3Q9D6Y1 Gm13475-201ENSMUST00000119290 234 ntBASIC0.87□□□□□ -2.27
Ccdc3Q9D6Y1 Gm22425-201ENSMUST00000158532 138 ntBASIC0.87□□□□□ -2.27
Ccdc3Q9D6Y1 Gm24577-201ENSMUST00000158580 63 ntBASIC0.87□□□□□ -2.27
Ccdc3Q9D6Y1 Gm27817-201ENSMUST00000184302 233 ntBASIC0.87□□□□□ -2.27
Ccdc3Q9D6Y1 Gm27755-201ENSMUST00000184623 132 ntBASIC0.87□□□□□ -2.27
Ccdc3Q9D6Y1 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
Ccdc3Q9D6Y1 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
Ccdc3Q9D6Y1 Gm5001-201ENSMUST00000204361 331 ntBASIC0.87□□□□□ -2.27
Ccdc3Q9D6Y1 Gm45315-201ENSMUST00000209283 333 ntBASIC0.87□□□□□ -2.27
Ccdc3Q9D6Y1 Gm45403-201ENSMUST00000209453 276 ntBASIC0.87□□□□□ -2.27
Ccdc3Q9D6Y1 AC162387.1-201ENSMUST00000213369 213 ntBASIC0.87□□□□□ -2.27
Ccdc3Q9D6Y1 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.87□□□□□ -2.27
Ccdc3Q9D6Y1 Snora41-201ENSMUST00000082668 132 ntBASIC0.87□□□□□ -2.27
Ccdc3Q9D6Y1 Gm26314-201ENSMUST00000083891 107 ntBASIC0.87□□□□□ -2.27
Ccdc3Q9D6Y1 Mir293-201ENSMUST00000104841 80 ntBASIC0.86□□□□□ -2.27
Ccdc3Q9D6Y1 Gm13396-201ENSMUST00000120617 271 ntBASIC0.86□□□□□ -2.27
Ccdc3Q9D6Y1 Gm11389-201ENSMUST00000121407 430 ntBASIC0.86□□□□□ -2.27
Ccdc3Q9D6Y1 Gm23557-201ENSMUST00000157820 138 ntBASIC0.86□□□□□ -2.27
Ccdc3Q9D6Y1 Gm23008-201ENSMUST00000158946 80 ntBASIC0.86□□□□□ -2.27
Ccdc3Q9D6Y1 Gm23379-201ENSMUST00000180026 107 ntBASIC0.86□□□□□ -2.27
Ccdc3Q9D6Y1 Gm27587-201ENSMUST00000185116 163 ntBASIC0.86□□□□□ -2.27
Ccdc3Q9D6Y1 Gm28344-201ENSMUST00000185704 279 ntBASIC0.86□□□□□ -2.27
Ccdc3Q9D6Y1 Gm28648-201ENSMUST00000190092 343 ntBASIC0.86□□□□□ -2.27
Ccdc3Q9D6Y1 Gm37089-201ENSMUST00000195616 129 ntBASIC0.86□□□□□ -2.27
Ccdc3Q9D6Y1 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC0.86□□□□□ -2.27
Ccdc3Q9D6Y1 AC166358.10-201ENSMUST00000220556 144 ntBASIC0.86□□□□□ -2.27
Ccdc3Q9D6Y1 Gm25859-201ENSMUST00000083710 91 ntBASIC0.86□□□□□ -2.27
Ccdc3Q9D6Y1 Gm26108-201ENSMUST00000083973 191 ntBASIC0.86□□□□□ -2.27
Ccdc3Q9D6Y1 Gm42718-201ENSMUST00000197319 2681 ntBASIC0.86□□□□□ -2.27
Ccdc3Q9D6Y1 Gm37642-201ENSMUST00000193166 1735 ntBASIC0.86□□□□□ -2.27
Ccdc3Q9D6Y1 AC102369.2-201ENSMUST00000219725 1679 ntBASIC0.85□□□□□ -2.27
Ccdc3Q9D6Y1 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC0.85□□□□□ -2.27
Ccdc3Q9D6Y1 Gm25559-201ENSMUST00000157182 74 ntBASIC0.85□□□□□ -2.27
Ccdc3Q9D6Y1 Gm24901-201ENSMUST00000158125 110 ntBASIC0.85□□□□□ -2.27
Ccdc3Q9D6Y1 Gm25486-201ENSMUST00000158726 63 ntBASIC0.85□□□□□ -2.27
Ccdc3Q9D6Y1 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.85□□□□□ -2.27
Ccdc3Q9D6Y1 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC0.85□□□□□ -2.27
Ccdc3Q9D6Y1 Gm5010-201ENSMUST00000213131 260 ntBASIC0.85□□□□□ -2.27
Ccdc3Q9D6Y1 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.85□□□□□ -2.27
Ccdc3Q9D6Y1 CT009718.4-201ENSMUST00000221881 109 ntBASIC0.85□□□□□ -2.27
Ccdc3Q9D6Y1 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
Ccdc3Q9D6Y1 Gm23299-201ENSMUST00000082708 79 ntBASIC0.85□□□□□ -2.27
Ccdc3Q9D6Y1 Gm25128-201ENSMUST00000083339 76 ntBASIC0.85□□□□□ -2.27
Ccdc3Q9D6Y1 Gm26066-201ENSMUST00000083385 109 ntBASIC0.85□□□□□ -2.27
Ccdc3Q9D6Y1 AC154515.1-201ENSMUST00000226085 2841 ntBASIC0.85□□□□□ -2.27
Ccdc3Q9D6Y1 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
Ccdc3Q9D6Y1 Gm22834-201ENSMUST00000102021 79 ntBASIC0.84□□□□□ -2.27
Ccdc3Q9D6Y1 Gm17132-201ENSMUST00000109542 1158 ntBASIC0.84□□□□□ -2.27
Ccdc3Q9D6Y1 Gm24588-201ENSMUST00000116696 83 ntBASIC0.84□□□□□ -2.27
Ccdc3Q9D6Y1 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC0.84□□□□□ -2.27
Ccdc3Q9D6Y1 Gm11410-201ENSMUST00000120053 1143 ntBASIC0.84□□□□□ -2.27
Ccdc3Q9D6Y1 Gm11891-201ENSMUST00000121241 619 ntBASIC0.84□□□□□ -2.27
Ccdc3Q9D6Y1 Gm12770-201ENSMUST00000121734 462 ntBASIC0.84□□□□□ -2.27
Ccdc3Q9D6Y1 Gm23277-201ENSMUST00000157914 136 ntBASIC0.84□□□□□ -2.27
Ccdc3Q9D6Y1 Gm3027-201ENSMUST00000167579 451 ntBASIC0.84□□□□□ -2.27
Ccdc3Q9D6Y1 Gm24510-201ENSMUST00000174965 94 ntBASIC0.84□□□□□ -2.27
Ccdc3Q9D6Y1 Gm23355-201ENSMUST00000177614 107 ntBASIC0.84□□□□□ -2.27
Ccdc3Q9D6Y1 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC0.84□□□□□ -2.27
Ccdc3Q9D6Y1 Gm27919-201ENSMUST00000185163 107 ntBASIC0.84□□□□□ -2.27
Ccdc3Q9D6Y1 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.84□□□□□ -2.27
Ccdc3Q9D6Y1 AC120394.1-201ENSMUST00000217153 351 ntBASIC0.84□□□□□ -2.27
Ccdc3Q9D6Y1 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC0.84□□□□□ -2.27
Ccdc3Q9D6Y1 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
Ccdc3Q9D6Y1 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
Ccdc3Q9D6Y1 Gm24035-201ENSMUST00000082867 107 ntBASIC0.84□□□□□ -2.27
Ccdc3Q9D6Y1 Gm23721-201ENSMUST00000083005 107 ntBASIC0.84□□□□□ -2.27
Ccdc3Q9D6Y1 AC133079.1-201ENSMUST00000220943 1881 ntBASIC0.84□□□□□ -2.28
Ccdc3Q9D6Y1 Gm25414-201ENSMUST00000101814 107 ntBASIC0.83□□□□□ -2.28
Ccdc3Q9D6Y1 Gm25416-201ENSMUST00000104221 107 ntBASIC0.83□□□□□ -2.28
Ccdc3Q9D6Y1 Gm9059-201ENSMUST00000118319 183 ntBASIC0.83□□□□□ -2.28
Ccdc3Q9D6Y1 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
Ccdc3Q9D6Y1 Gm17052-201ENSMUST00000165496 289 ntBASIC0.83□□□□□ -2.28
Ccdc3Q9D6Y1 Gm23419-201ENSMUST00000175523 84 ntBASIC0.83□□□□□ -2.28
Ccdc3Q9D6Y1 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC0.83□□□□□ -2.28
Ccdc3Q9D6Y1 Gm26265-202ENSMUST00000196326 133 ntBASIC0.83□□□□□ -2.28
Ccdc3Q9D6Y1 Gm44726-201ENSMUST00000203427 217 ntBASIC0.83□□□□□ -2.28
Ccdc3Q9D6Y1 AC147101.1-201ENSMUST00000217964 312 ntBASIC0.83□□□□□ -2.28
Ccdc3Q9D6Y1 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC0.83□□□□□ -2.28
Ccdc3Q9D6Y1 Gm46997-201ENSMUST00000222108 217 ntBASIC0.83□□□□□ -2.28
Ccdc3Q9D6Y1 Gm25801-201ENSMUST00000082638 106 ntBASIC0.83□□□□□ -2.28
Ccdc3Q9D6Y1 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC0.83□□□□□ -2.28
Ccdc3Q9D6Y1 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC0.83□□□□□ -2.28
Ccdc3Q9D6Y1 Gm26500-201ENSMUST00000101867 106 ntBASIC0.82□□□□□ -2.28
Ccdc3Q9D6Y1 Gm26339-201ENSMUST00000102368 99 ntBASIC0.82□□□□□ -2.28
Ccdc3Q9D6Y1 Gm11862-201ENSMUST00000119678 659 ntBASIC0.82□□□□□ -2.28
Ccdc3Q9D6Y1 Gm22233-201ENSMUST00000157464 114 ntBASIC0.82□□□□□ -2.28
Ccdc3Q9D6Y1 Gm24409-201ENSMUST00000157881 152 ntBASIC0.82□□□□□ -2.28
Ccdc3Q9D6Y1 Gm26358-201ENSMUST00000158215 97 ntBASIC0.82□□□□□ -2.28
Ccdc3Q9D6Y1 Gm25868-201ENSMUST00000158253 114 ntBASIC0.82□□□□□ -2.28
Ccdc3Q9D6Y1 Gm22945-201ENSMUST00000158557 157 ntBASIC0.82□□□□□ -2.28
Ccdc3Q9D6Y1 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC0.82□□□□□ -2.28
Ccdc3Q9D6Y1 Gm28848-201ENSMUST00000189984 168 ntBASIC0.82□□□□□ -2.28
Ccdc3Q9D6Y1 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.82□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 126.9 ms