Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm24079-201ENSMUST00000104352 132 ntBASIC2.53□□□□□ -2
Ddx56Q9D0R4 Mir293-201ENSMUST00000104841 80 ntBASIC2.53□□□□□ -2
Ddx56Q9D0R4 Gm13756-201ENSMUST00000117618 222 ntBASIC2.53□□□□□ -2
Ddx56Q9D0R4 Gm15281-201ENSMUST00000125181 351 ntBASIC2.53□□□□□ -2
Ddx56Q9D0R4 Gm24851-201ENSMUST00000158028 103 ntBASIC2.53□□□□□ -2
Ddx56Q9D0R4 Gm23854-201ENSMUST00000158378 108 ntBASIC2.53□□□□□ -2
Ddx56Q9D0R4 Gm44352-201ENSMUST00000196358 110 ntBASIC2.53□□□□□ -2
Ddx56Q9D0R4 Gm22248-201ENSMUST00000082482 150 ntBASIC2.53□□□□□ -2
Ddx56Q9D0R4 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Ddx56Q9D0R4 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Ddx56Q9D0R4 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.52□□□□□ -2.01
Ddx56Q9D0R4 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
Ddx56Q9D0R4 Mir344c-201ENSMUST00000103919 92 ntBASIC2.52□□□□□ -2.01
Ddx56Q9D0R4 Gm14837-201ENSMUST00000119688 206 ntBASIC2.52□□□□□ -2.01
Ddx56Q9D0R4 Gm25808-201ENSMUST00000122784 284 ntBASIC2.52□□□□□ -2.01
Ddx56Q9D0R4 Gm23219-201ENSMUST00000158123 87 ntBASIC2.52□□□□□ -2.01
Ddx56Q9D0R4 Gm25615-201ENSMUST00000177836 94 ntBASIC2.52□□□□□ -2.01
Ddx56Q9D0R4 Gm23860-201ENSMUST00000179446 132 ntBASIC2.52□□□□□ -2.01
Ddx56Q9D0R4 Gm25024-201ENSMUST00000179667 104 ntBASIC2.52□□□□□ -2.01
Ddx56Q9D0R4 Gm27421-201ENSMUST00000184729 167 ntBASIC2.52□□□□□ -2.01
Ddx56Q9D0R4 Mir6993-201ENSMUST00000184912 65 ntBASIC2.52□□□□□ -2.01
Ddx56Q9D0R4 Gm29140-201ENSMUST00000190187 476 ntBASIC2.52□□□□□ -2.01
Ddx56Q9D0R4 Gm43626-201ENSMUST00000198575 162 ntBASIC2.52□□□□□ -2.01
Ddx56Q9D0R4 AC132615.1-201ENSMUST00000213873 255 ntBASIC2.52□□□□□ -2.01
Ddx56Q9D0R4 AC173482.5-201ENSMUST00000224181 327 ntBASIC2.52□□□□□ -2.01
Ddx56Q9D0R4 Gm24204-201ENSMUST00000082950 107 ntBASIC2.52□□□□□ -2.01
Ddx56Q9D0R4 Gm23039-201ENSMUST00000083870 161 ntBASIC2.52□□□□□ -2.01
Ddx56Q9D0R4 Gm25628-201ENSMUST00000084002 105 ntBASIC2.52□□□□□ -2.01
Ddx56Q9D0R4 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Ddx56Q9D0R4 Gm22752-201ENSMUST00000102083 109 ntBASIC2.51□□□□□ -2.01
Ddx56Q9D0R4 Gm22784-201ENSMUST00000104088 132 ntBASIC2.51□□□□□ -2.01
Ddx56Q9D0R4 Gm24835-201ENSMUST00000116777 111 ntBASIC2.51□□□□□ -2.01
Ddx56Q9D0R4 Gm15986-201ENSMUST00000122153 400 ntBASIC2.51□□□□□ -2.01
Ddx56Q9D0R4 Gm23390-201ENSMUST00000157393 106 ntBASIC2.51□□□□□ -2.01
Ddx56Q9D0R4 Gm22075-201ENSMUST00000158599 192 ntBASIC2.51□□□□□ -2.01
Ddx56Q9D0R4 Mir6388-201ENSMUST00000184417 75 ntBASIC2.51□□□□□ -2.01
Ddx56Q9D0R4 Gm35736-201ENSMUST00000203681 313 ntBASIC2.51□□□□□ -2.01
Ddx56Q9D0R4 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.51□□□□□ -2.01
Ddx56Q9D0R4 AC239878.2-201ENSMUST00000224048 464 ntBASIC2.51□□□□□ -2.01
Ddx56Q9D0R4 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.51□□□□□ -2.01
Ddx56Q9D0R4 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.51□□□□□ -2.01
Ddx56Q9D0R4 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Ddx56Q9D0R4 AC153964.2-201ENSMUST00000217704 2474 ntBASIC2.5□□□□□ -2.01
Ddx56Q9D0R4 Gm22674-201ENSMUST00000104413 131 ntBASIC2.5□□□□□ -2.01
Ddx56Q9D0R4 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.5□□□□□ -2.01
Ddx56Q9D0R4 Gm25664-201ENSMUST00000157697 107 ntBASIC2.5□□□□□ -2.01
Ddx56Q9D0R4 Mir3076-201ENSMUST00000175415 60 ntBASIC2.5□□□□□ -2.01
Ddx56Q9D0R4 Gm43865-201ENSMUST00000204721 127 ntBASIC2.5□□□□□ -2.01
Ddx56Q9D0R4 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.5□□□□□ -2.01
Ddx56Q9D0R4 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.5□□□□□ -2.01
Ddx56Q9D0R4 Gm25204-201ENSMUST00000082843 106 ntBASIC2.5□□□□□ -2.01
Ddx56Q9D0R4 Gm26494-201ENSMUST00000083154 143 ntBASIC2.5□□□□□ -2.01
Ddx56Q9D0R4 Gm24493-201ENSMUST00000083805 143 ntBASIC2.5□□□□□ -2.01
Ddx56Q9D0R4 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Ddx56Q9D0R4 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Ddx56Q9D0R4 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
Ddx56Q9D0R4 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Ddx56Q9D0R4 Gm14846-201ENSMUST00000121868 216 ntBASIC2.49□□□□□ -2.01
Ddx56Q9D0R4 Gm24392-201ENSMUST00000158136 103 ntBASIC2.49□□□□□ -2.01
Ddx56Q9D0R4 Gm25866-201ENSMUST00000158245 112 ntBASIC2.49□□□□□ -2.01
Ddx56Q9D0R4 Gm24667-201ENSMUST00000158938 103 ntBASIC2.49□□□□□ -2.01
Ddx56Q9D0R4 Gm25235-201ENSMUST00000179933 107 ntBASIC2.49□□□□□ -2.01
Ddx56Q9D0R4 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.49□□□□□ -2.01
Ddx56Q9D0R4 AC165157.3-201ENSMUST00000220815 103 ntBASIC2.49□□□□□ -2.01
Ddx56Q9D0R4 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.49□□□□□ -2.01
Ddx56Q9D0R4 Gm24412-201ENSMUST00000083426 109 ntBASIC2.49□□□□□ -2.01
Ddx56Q9D0R4 Mir181b-2-201ENSMUST00000083644 89 ntBASIC2.49□□□□□ -2.01
Ddx56Q9D0R4 Mir301-201ENSMUST00000083655 86 ntBASIC2.49□□□□□ -2.01
Ddx56Q9D0R4 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
Ddx56Q9D0R4 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Ddx56Q9D0R4 Gm25407-201ENSMUST00000104102 134 ntBASIC2.48□□□□□ -2.01
Ddx56Q9D0R4 Gm23803-201ENSMUST00000104610 132 ntBASIC2.48□□□□□ -2.01
Ddx56Q9D0R4 Gm23536-201ENSMUST00000157541 134 ntBASIC2.48□□□□□ -2.01
Ddx56Q9D0R4 Gm25658-201ENSMUST00000158472 128 ntBASIC2.48□□□□□ -2.01
Ddx56Q9D0R4 Gm20477-201ENSMUST00000174028 280 ntBASIC2.48□□□□□ -2.01
Ddx56Q9D0R4 AC125167.1-201ENSMUST00000198698 141 ntBASIC2.48□□□□□ -2.01
Ddx56Q9D0R4 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC2.48□□□□□ -2.01
Ddx56Q9D0R4 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Ddx56Q9D0R4 Gm45344-201ENSMUST00000211610 341 ntBASIC2.47□□□□□ -2.01
Ddx56Q9D0R4 Gm45907-201ENSMUST00000213023 193 ntBASIC2.47□□□□□ -2.01
Ddx56Q9D0R4 Mir423-201ENSMUST00000083584 109 ntBASIC2.47□□□□□ -2.01
Ddx56Q9D0R4 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Ddx56Q9D0R4 Gm14652-201ENSMUST00000118479 235 ntBASIC2.46□□□□□ -2.02
Ddx56Q9D0R4 Gm11598-201ENSMUST00000119257 357 ntBASIC2.46□□□□□ -2.02
Ddx56Q9D0R4 Gm13913-201ENSMUST00000121126 260 ntBASIC2.46□□□□□ -2.02
Ddx56Q9D0R4 Gm19123-201ENSMUST00000190716 651 ntBASIC2.46□□□□□ -2.02
Ddx56Q9D0R4 Gm43722-201ENSMUST00000196054 124 ntBASIC2.46□□□□□ -2.02
Ddx56Q9D0R4 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Ddx56Q9D0R4 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.46□□□□□ -2.02
Ddx56Q9D0R4 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Ddx56Q9D0R4 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.45□□□□□ -2.02
Ddx56Q9D0R4 Gm24594-201ENSMUST00000122502 99 ntBASIC2.45□□□□□ -2.02
Ddx56Q9D0R4 Gm22097-201ENSMUST00000157929 278 ntBASIC2.45□□□□□ -2.02
Ddx56Q9D0R4 Gm24006-201ENSMUST00000158462 132 ntBASIC2.45□□□□□ -2.02
Ddx56Q9D0R4 Gm22258-201ENSMUST00000177645 94 ntBASIC2.45□□□□□ -2.02
Ddx56Q9D0R4 Gm26032-201ENSMUST00000178535 94 ntBASIC2.45□□□□□ -2.02
Ddx56Q9D0R4 Gm25210-201ENSMUST00000178813 94 ntBASIC2.45□□□□□ -2.02
Ddx56Q9D0R4 Gm25157-201ENSMUST00000178914 94 ntBASIC2.45□□□□□ -2.02
Ddx56Q9D0R4 Gm22046-201ENSMUST00000179027 94 ntBASIC2.45□□□□□ -2.02
Ddx56Q9D0R4 Gm22941-201ENSMUST00000179630 94 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 123.2 ms