Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm7950-201ENSMUST00000179633 468 ntBASIC1.87□□□□□ -2.11
Ddx28Q9CWT6 Mir6950-201ENSMUST00000184438 73 ntBASIC1.87□□□□□ -2.11
Ddx28Q9CWT6 Gm44533-201ENSMUST00000207782 268 ntBASIC1.87□□□□□ -2.11
Ddx28Q9CWT6 Gm45543-201ENSMUST00000209327 88 ntBASIC1.87□□□□□ -2.11
Ddx28Q9CWT6 Gm11351-202ENSMUST00000225724 478 ntBASIC1.87□□□□□ -2.11
Ddx28Q9CWT6 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.87□□□□□ -2.11
Ddx28Q9CWT6 Gm26497-201ENSMUST00000083146 107 ntBASIC1.87□□□□□ -2.11
Ddx28Q9CWT6 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.86□□□□□ -2.11
Ddx28Q9CWT6 Gm26077-201ENSMUST00000104064 123 ntBASIC1.86□□□□□ -2.11
Ddx28Q9CWT6 Mir3096-201ENSMUST00000116685 71 ntBASIC1.86□□□□□ -2.11
Ddx28Q9CWT6 Gm12941-201ENSMUST00000117934 220 ntBASIC1.86□□□□□ -2.11
Ddx28Q9CWT6 Gm22264-201ENSMUST00000178200 107 ntBASIC1.86□□□□□ -2.11
Ddx28Q9CWT6 Mir7016-201ENSMUST00000184308 72 ntBASIC1.86□□□□□ -2.11
Ddx28Q9CWT6 Gm28453-203ENSMUST00000187041 189 ntBASIC1.86□□□□□ -2.11
Ddx28Q9CWT6 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.86□□□□□ -2.11
Ddx28Q9CWT6 Gm37889-201ENSMUST00000194174 251 ntBASIC1.86□□□□□ -2.11
Ddx28Q9CWT6 Mir3961-201ENSMUST00000198795 59 ntBASIC1.86□□□□□ -2.11
Ddx28Q9CWT6 Mir3970-201ENSMUST00000199287 90 ntBASIC1.86□□□□□ -2.11
Ddx28Q9CWT6 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1.86□□□□□ -2.11
Ddx28Q9CWT6 Gm10222-201ENSMUST00000088336 294 ntBASIC1.86□□□□□ -2.11
Ddx28Q9CWT6 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.86□□□□□ -2.11
Ddx28Q9CWT6 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
Ddx28Q9CWT6 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Ddx28Q9CWT6 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Ddx28Q9CWT6 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Ddx28Q9CWT6 Mir669d-201ENSMUST00000104644 121 ntBASIC1.85□□□□□ -2.11
Ddx28Q9CWT6 Gm26479-201ENSMUST00000122620 106 ntBASIC1.85□□□□□ -2.11
Ddx28Q9CWT6 Gm22027-201ENSMUST00000122737 127 ntBASIC1.85□□□□□ -2.11
Ddx28Q9CWT6 Gm22664-201ENSMUST00000158719 105 ntBASIC1.85□□□□□ -2.11
Ddx28Q9CWT6 Gm23342-201ENSMUST00000158958 115 ntBASIC1.85□□□□□ -2.11
Ddx28Q9CWT6 Gm23090-201ENSMUST00000177331 78 ntBASIC1.85□□□□□ -2.11
Ddx28Q9CWT6 Gm26435-201ENSMUST00000179026 107 ntBASIC1.85□□□□□ -2.11
Ddx28Q9CWT6 Gm23003-201ENSMUST00000179948 107 ntBASIC1.85□□□□□ -2.11
Ddx28Q9CWT6 Gm42834-201ENSMUST00000196845 256 ntBASIC1.85□□□□□ -2.11
Ddx28Q9CWT6 Gm44055-201ENSMUST00000204376 247 ntBASIC1.85□□□□□ -2.11
Ddx28Q9CWT6 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.85□□□□□ -2.11
Ddx28Q9CWT6 AC115735.2-201ENSMUST00000227135 351 ntBASIC1.85□□□□□ -2.11
Ddx28Q9CWT6 Gm24165-201ENSMUST00000082718 128 ntBASIC1.85□□□□□ -2.11
Ddx28Q9CWT6 Gm25930-201ENSMUST00000082785 107 ntBASIC1.85□□□□□ -2.11
Ddx28Q9CWT6 Gm24536-201ENSMUST00000083144 107 ntBASIC1.85□□□□□ -2.11
Ddx28Q9CWT6 Gm26493-201ENSMUST00000083155 136 ntBASIC1.85□□□□□ -2.11
Ddx28Q9CWT6 Mir429-201ENSMUST00000083493 83 ntBASIC1.85□□□□□ -2.11
Ddx28Q9CWT6 Gm24098-201ENSMUST00000102075 109 ntBASIC1.84□□□□□ -2.11
Ddx28Q9CWT6 Gm25381-201ENSMUST00000102078 109 ntBASIC1.84□□□□□ -2.11
Ddx28Q9CWT6 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Ddx28Q9CWT6 Gm25111-201ENSMUST00000116686 147 ntBASIC1.84□□□□□ -2.11
Ddx28Q9CWT6 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.84□□□□□ -2.11
Ddx28Q9CWT6 Gm8121-201ENSMUST00000153583 499 ntBASIC1.84□□□□□ -2.11
Ddx28Q9CWT6 Gm25392-201ENSMUST00000157335 297 ntBASIC1.84□□□□□ -2.11
Ddx28Q9CWT6 Gm24510-201ENSMUST00000174965 94 ntBASIC1.84□□□□□ -2.11
Ddx28Q9CWT6 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.84□□□□□ -2.11
Ddx28Q9CWT6 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.84□□□□□ -2.11
Ddx28Q9CWT6 Gm42960-201ENSMUST00000202160 241 ntBASIC1.84□□□□□ -2.11
Ddx28Q9CWT6 AC164086.1-201ENSMUST00000221038 289 ntBASIC1.84□□□□□ -2.11
Ddx28Q9CWT6 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.84□□□□□ -2.11
Ddx28Q9CWT6 Gm22571-201ENSMUST00000082984 70 ntBASIC1.84□□□□□ -2.11
Ddx28Q9CWT6 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Ddx28Q9CWT6 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.83□□□□□ -2.12
Ddx28Q9CWT6 Gm11388-201ENSMUST00000120908 159 ntBASIC1.83□□□□□ -2.12
Ddx28Q9CWT6 Gm22984-201ENSMUST00000122751 122 ntBASIC1.83□□□□□ -2.12
Ddx28Q9CWT6 Gm15692-201ENSMUST00000152173 352 ntBASIC1.83□□□□□ -2.12
Ddx28Q9CWT6 Gm22727-201ENSMUST00000158090 116 ntBASIC1.83□□□□□ -2.12
Ddx28Q9CWT6 Gm44491-201ENSMUST00000196794 96 ntBASIC1.83□□□□□ -2.12
Ddx28Q9CWT6 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Ddx28Q9CWT6 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC1.83□□□□□ -2.12
Ddx28Q9CWT6 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.83□□□□□ -2.12
Ddx28Q9CWT6 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.82□□□□□ -2.12
Ddx28Q9CWT6 Gm27332-201ENSMUST00000184893 112 ntBASIC1.82□□□□□ -2.12
Ddx28Q9CWT6 Gm38060-201ENSMUST00000194822 464 ntBASIC1.82□□□□□ -2.12
Ddx28Q9CWT6 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.82□□□□□ -2.12
Ddx28Q9CWT6 Snord43-201ENSMUST00000199549 108 ntBASIC1.82□□□□□ -2.12
Ddx28Q9CWT6 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.82□□□□□ -2.12
Ddx28Q9CWT6 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.82□□□□□ -2.12
Ddx28Q9CWT6 AC165092.3-201ENSMUST00000223602 282 ntBASIC1.82□□□□□ -2.12
Ddx28Q9CWT6 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.82□□□□□ -2.12
Ddx28Q9CWT6 Gm10092-201ENSMUST00000077110 180 ntBASIC1.82□□□□□ -2.12
Ddx28Q9CWT6 Gm24164-201ENSMUST00000093663 104 ntBASIC1.82□□□□□ -2.12
Ddx28Q9CWT6 Mir767-201ENSMUST00000103256 107 ntBASIC1.81□□□□□ -2.12
Ddx28Q9CWT6 Gm24907-201ENSMUST00000116932 128 ntBASIC1.81□□□□□ -2.12
Ddx28Q9CWT6 Gm14001-201ENSMUST00000118847 247 ntBASIC1.81□□□□□ -2.12
Ddx28Q9CWT6 Gm14883-201ENSMUST00000120179 157 ntBASIC1.81□□□□□ -2.12
Ddx28Q9CWT6 Gm23982-201ENSMUST00000157141 106 ntBASIC1.81□□□□□ -2.12
Ddx28Q9CWT6 Gm22883-201ENSMUST00000157376 106 ntBASIC1.81□□□□□ -2.12
Ddx28Q9CWT6 Gm26345-201ENSMUST00000157534 120 ntBASIC1.81□□□□□ -2.12
Ddx28Q9CWT6 Gm23640-201ENSMUST00000157860 104 ntBASIC1.81□□□□□ -2.12
Ddx28Q9CWT6 Gm24847-201ENSMUST00000158032 108 ntBASIC1.81□□□□□ -2.12
Ddx28Q9CWT6 Gm26405-201ENSMUST00000158495 100 ntBASIC1.81□□□□□ -2.12
Ddx28Q9CWT6 Gm25491-201ENSMUST00000158733 308 ntBASIC1.81□□□□□ -2.12
Ddx28Q9CWT6 Gm23548-201ENSMUST00000158963 106 ntBASIC1.81□□□□□ -2.12
Ddx28Q9CWT6 Gm27443-201ENSMUST00000184660 98 ntBASIC1.81□□□□□ -2.12
Ddx28Q9CWT6 Gm38019-201ENSMUST00000195133 380 ntBASIC1.81□□□□□ -2.12
Ddx28Q9CWT6 Gm35736-201ENSMUST00000203681 313 ntBASIC1.81□□□□□ -2.12
Ddx28Q9CWT6 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.81□□□□□ -2.12
Ddx28Q9CWT6 AC098718.2-201ENSMUST00000226822 285 ntBASIC1.81□□□□□ -2.12
Ddx28Q9CWT6 Snord118-201ENSMUST00000082965 135 ntBASIC1.81□□□□□ -2.12
Ddx28Q9CWT6 Mir322-201ENSMUST00000083484 95 ntBASIC1.81□□□□□ -2.12
Ddx28Q9CWT6 Mir107-201ENSMUST00000083660 87 ntBASIC1.81□□□□□ -2.12
Ddx28Q9CWT6 Gm45652-201ENSMUST00000210926 3831 ntBASIC1.8□□□□□ -2.12
Ddx28Q9CWT6 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Ddx28Q9CWT6 Gm25875-201ENSMUST00000104323 107 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 137.2 ms