Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm23015-201ENSMUST00000104145 128 ntBASIC1.67□□□□□ -2.14
Smc1aQ9CU62 Gm11254-201ENSMUST00000122368 653 ntBASIC1.67□□□□□ -2.14
Smc1aQ9CU62 Gm25914-201ENSMUST00000157618 153 ntBASIC1.67□□□□□ -2.14
Smc1aQ9CU62 Gm26405-201ENSMUST00000158495 100 ntBASIC1.67□□□□□ -2.14
Smc1aQ9CU62 Gm26400-201ENSMUST00000175012 85 ntBASIC1.67□□□□□ -2.14
Smc1aQ9CU62 Gm27517-201ENSMUST00000184347 236 ntBASIC1.67□□□□□ -2.14
Smc1aQ9CU62 Mir7665-201ENSMUST00000184907 63 ntBASIC1.67□□□□□ -2.14
Smc1aQ9CU62 Gm28717-201ENSMUST00000189950 315 ntBASIC1.67□□□□□ -2.14
Smc1aQ9CU62 Gm19901-201ENSMUST00000192191 495 ntBASIC1.67□□□□□ -2.14
Smc1aQ9CU62 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Smc1aQ9CU62 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.67□□□□□ -2.14
Smc1aQ9CU62 Gm43406-201ENSMUST00000200356 334 ntBASIC1.67□□□□□ -2.14
Smc1aQ9CU62 Gm44654-201ENSMUST00000208052 329 ntBASIC1.67□□□□□ -2.14
Smc1aQ9CU62 Mir133a-1-201ENSMUST00000083465 68 ntBASIC1.67□□□□□ -2.14
Smc1aQ9CU62 Mir221-201ENSMUST00000083488 95 ntBASIC1.67□□□□□ -2.14
Smc1aQ9CU62 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.66□□□□□ -2.14
Smc1aQ9CU62 Gm25992-201ENSMUST00000102437 109 ntBASIC1.66□□□□□ -2.14
Smc1aQ9CU62 Gm12417-201ENSMUST00000119153 403 ntBASIC1.66□□□□□ -2.14
Smc1aQ9CU62 Gm13518-201ENSMUST00000120018 233 ntBASIC1.66□□□□□ -2.14
Smc1aQ9CU62 Rnu7-201ENSMUST00000158458 62 ntBASIC1.66□□□□□ -2.14
Smc1aQ9CU62 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.66□□□□□ -2.14
Smc1aQ9CU62 Gm25958-201ENSMUST00000175114 71 ntBASIC1.66□□□□□ -2.14
Smc1aQ9CU62 Gm24799-201ENSMUST00000178431 79 ntBASIC1.66□□□□□ -2.14
Smc1aQ9CU62 Gm26968-201ENSMUST00000182894 481 ntBASIC1.66□□□□□ -2.14
Smc1aQ9CU62 Gm43035-201ENSMUST00000197626 517 ntBASIC1.66□□□□□ -2.14
Smc1aQ9CU62 AC109214.2-201ENSMUST00000220089 358 ntBASIC1.66□□□□□ -2.14
Smc1aQ9CU62 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.66□□□□□ -2.14
Smc1aQ9CU62 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.66□□□□□ -2.14
Smc1aQ9CU62 Gm16976-205ENSMUST00000227324 226 ntBASIC1.66□□□□□ -2.14
Smc1aQ9CU62 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Smc1aQ9CU62 Snord118-201ENSMUST00000082965 135 ntBASIC1.66□□□□□ -2.14
Smc1aQ9CU62 AC121844.2-201ENSMUST00000219067 2066 ntBASIC1.66□□□□□ -2.14
Smc1aQ9CU62 Gm26082-201ENSMUST00000104070 127 ntBASIC1.65□□□□□ -2.15
Smc1aQ9CU62 Gm22032-201ENSMUST00000116946 116 ntBASIC1.65□□□□□ -2.15
Smc1aQ9CU62 Mir1b-201ENSMUST00000117012 122 ntBASIC1.65□□□□□ -2.15
Smc1aQ9CU62 Gm14980-201ENSMUST00000121247 736 ntBASIC1.65□□□□□ -2.15
Smc1aQ9CU62 Gm22027-201ENSMUST00000122737 127 ntBASIC1.65□□□□□ -2.15
Smc1aQ9CU62 Gm24895-201ENSMUST00000122742 74 ntBASIC1.65□□□□□ -2.15
Smc1aQ9CU62 Gm26150-201ENSMUST00000157426 151 ntBASIC1.65□□□□□ -2.15
Smc1aQ9CU62 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.65□□□□□ -2.15
Smc1aQ9CU62 Gm23535-201ENSMUST00000157542 106 ntBASIC1.65□□□□□ -2.15
Smc1aQ9CU62 Gm22963-201ENSMUST00000157960 91 ntBASIC1.65□□□□□ -2.15
Smc1aQ9CU62 Gm22085-201ENSMUST00000158344 110 ntBASIC1.65□□□□□ -2.15
Smc1aQ9CU62 Gm24390-201ENSMUST00000179578 62 ntBASIC1.65□□□□□ -2.15
Smc1aQ9CU62 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.65□□□□□ -2.15
Smc1aQ9CU62 Gm28912-201ENSMUST00000189001 234 ntBASIC1.65□□□□□ -2.15
Smc1aQ9CU62 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Smc1aQ9CU62 Gm43993-201ENSMUST00000203972 247 ntBASIC1.65□□□□□ -2.15
Smc1aQ9CU62 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC1.65□□□□□ -2.15
Smc1aQ9CU62 AC154747.1-201ENSMUST00000225265 239 ntBASIC1.65□□□□□ -2.15
Smc1aQ9CU62 Snord42a-201ENSMUST00000082606 65 ntBASIC1.65□□□□□ -2.15
Smc1aQ9CU62 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Smc1aQ9CU62 Gm10033-201ENSMUST00000072427 1813 ntBASIC1.64□□□□□ -2.15
Smc1aQ9CU62 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Smc1aQ9CU62 Gm23656-201ENSMUST00000122626 112 ntBASIC1.64□□□□□ -2.15
Smc1aQ9CU62 Gm22447-201ENSMUST00000158155 92 ntBASIC1.64□□□□□ -2.15
Smc1aQ9CU62 Gm26265-202ENSMUST00000196326 133 ntBASIC1.64□□□□□ -2.15
Smc1aQ9CU62 AC155712.1-201ENSMUST00000219704 160 ntBASIC1.64□□□□□ -2.15
Smc1aQ9CU62 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC1.64□□□□□ -2.15
Smc1aQ9CU62 Gm24615-201ENSMUST00000083268 113 ntBASIC1.64□□□□□ -2.15
Smc1aQ9CU62 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.64□□□□□ -2.15
Smc1aQ9CU62 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.63□□□□□ -2.15
Smc1aQ9CU62 BC022960-201ENSMUST00000119987 1815 ntBASIC1.63□□□□□ -2.15
Smc1aQ9CU62 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.63□□□□□ -2.15
Smc1aQ9CU62 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.63□□□□□ -2.15
Smc1aQ9CU62 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.63□□□□□ -2.15
Smc1aQ9CU62 Gm24618-201ENSMUST00000177718 94 ntBASIC1.63□□□□□ -2.15
Smc1aQ9CU62 Gm23953-201ENSMUST00000178214 94 ntBASIC1.63□□□□□ -2.15
Smc1aQ9CU62 Gm25671-201ENSMUST00000178612 105 ntBASIC1.63□□□□□ -2.15
Smc1aQ9CU62 Gm23307-201ENSMUST00000179167 105 ntBASIC1.63□□□□□ -2.15
Smc1aQ9CU62 Gm25286-201ENSMUST00000179790 105 ntBASIC1.63□□□□□ -2.15
Smc1aQ9CU62 Gm26332-201ENSMUST00000179813 94 ntBASIC1.63□□□□□ -2.15
Smc1aQ9CU62 Gm22863-201ENSMUST00000180265 94 ntBASIC1.63□□□□□ -2.15
Smc1aQ9CU62 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC1.63□□□□□ -2.15
Smc1aQ9CU62 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.63□□□□□ -2.15
Smc1aQ9CU62 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC1.63□□□□□ -2.15
Smc1aQ9CU62 AC192333.1-201ENSMUST00000224573 376 ntBASIC1.63□□□□□ -2.15
Smc1aQ9CU62 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.63□□□□□ -2.15
Smc1aQ9CU62 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.63□□□□□ -2.15
Smc1aQ9CU62 Gm24152-201ENSMUST00000082764 163 ntBASIC1.63□□□□□ -2.15
Smc1aQ9CU62 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Smc1aQ9CU62 Gm4746-201ENSMUST00000120395 2406 ntBASIC1.62□□□□□ -2.15
Smc1aQ9CU62 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Smc1aQ9CU62 Gm14937-201ENSMUST00000119709 208 ntBASIC1.62□□□□□ -2.15
Smc1aQ9CU62 Gm12785-201ENSMUST00000122052 172 ntBASIC1.62□□□□□ -2.15
Smc1aQ9CU62 Gm27894-201ENSMUST00000184177 92 ntBASIC1.62□□□□□ -2.15
Smc1aQ9CU62 Mir6962-201ENSMUST00000199512 63 ntBASIC1.62□□□□□ -2.15
Smc1aQ9CU62 Gm43505-201ENSMUST00000200579 139 ntBASIC1.62□□□□□ -2.15
Smc1aQ9CU62 Gm43884-201ENSMUST00000204251 559 ntBASIC1.62□□□□□ -2.15
Smc1aQ9CU62 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.62□□□□□ -2.15
Smc1aQ9CU62 Gm25135-201ENSMUST00000082648 143 ntBASIC1.62□□□□□ -2.15
Smc1aQ9CU62 Gm24536-201ENSMUST00000083144 107 ntBASIC1.62□□□□□ -2.15
Smc1aQ9CU62 Gm25937-201ENSMUST00000083912 107 ntBASIC1.62□□□□□ -2.15
Smc1aQ9CU62 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.62□□□□□ -2.15
Smc1aQ9CU62 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Smc1aQ9CU62 Gm22149-201ENSMUST00000104442 136 ntBASIC1.61□□□□□ -2.15
Smc1aQ9CU62 Gm14782-201ENSMUST00000120151 195 ntBASIC1.61□□□□□ -2.15
Smc1aQ9CU62 Gm22836-201ENSMUST00000158441 61 ntBASIC1.61□□□□□ -2.15
Smc1aQ9CU62 Gm22945-201ENSMUST00000158557 157 ntBASIC1.61□□□□□ -2.15
Smc1aQ9CU62 Gm17113-201ENSMUST00000170118 171 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 150 ms