Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC0.89□□□□□ -2.27
Use1Q9CQ56 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.89□□□□□ -2.27
Use1Q9CQ56 Snord35a-201ENSMUST00000083884 90 ntBASIC0.89□□□□□ -2.27
Use1Q9CQ56 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
Use1Q9CQ56 Gm12143-201ENSMUST00000119666 332 ntBASIC0.88□□□□□ -2.27
Use1Q9CQ56 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.88□□□□□ -2.27
Use1Q9CQ56 Gm23435-201ENSMUST00000157183 156 ntBASIC0.88□□□□□ -2.27
Use1Q9CQ56 Gm24438-201ENSMUST00000157893 115 ntBASIC0.88□□□□□ -2.27
Use1Q9CQ56 Gm23636-201ENSMUST00000175070 95 ntBASIC0.88□□□□□ -2.27
Use1Q9CQ56 Gm24618-201ENSMUST00000177718 94 ntBASIC0.88□□□□□ -2.27
Use1Q9CQ56 Gm23953-201ENSMUST00000178214 94 ntBASIC0.88□□□□□ -2.27
Use1Q9CQ56 Gm26332-201ENSMUST00000179813 94 ntBASIC0.88□□□□□ -2.27
Use1Q9CQ56 Gm22863-201ENSMUST00000180265 94 ntBASIC0.88□□□□□ -2.27
Use1Q9CQ56 Gm37128-201ENSMUST00000192599 232 ntBASIC0.88□□□□□ -2.27
Use1Q9CQ56 Gm44301-201ENSMUST00000200362 143 ntBASIC0.88□□□□□ -2.27
Use1Q9CQ56 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC0.88□□□□□ -2.27
Use1Q9CQ56 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC0.88□□□□□ -2.27
Use1Q9CQ56 Gm11351-202ENSMUST00000225724 478 ntBASIC0.88□□□□□ -2.27
Use1Q9CQ56 AC160550.1-201ENSMUST00000228659 181 ntBASIC0.88□□□□□ -2.27
Use1Q9CQ56 Gm9795-201ENSMUST00000062156 693 ntBASIC0.88□□□□□ -2.27
Use1Q9CQ56 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC0.87□□□□□ -2.27
Use1Q9CQ56 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC0.87□□□□□ -2.27
Use1Q9CQ56 Gm22279-201ENSMUST00000157200 93 ntBASIC0.87□□□□□ -2.27
Use1Q9CQ56 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC0.87□□□□□ -2.27
Use1Q9CQ56 Gm24799-201ENSMUST00000178431 79 ntBASIC0.87□□□□□ -2.27
Use1Q9CQ56 Gm17067-202ENSMUST00000180131 123 ntBASIC0.87□□□□□ -2.27
Use1Q9CQ56 Gm27898-201ENSMUST00000183987 80 ntBASIC0.87□□□□□ -2.27
Use1Q9CQ56 Gm29640-201ENSMUST00000187972 278 ntBASIC0.87□□□□□ -2.27
Use1Q9CQ56 AC124542.1-201ENSMUST00000205588 908 ntBASIC0.87□□□□□ -2.27
Use1Q9CQ56 AC164161.1-201ENSMUST00000214076 639 ntBASIC0.87□□□□□ -2.27
Use1Q9CQ56 AC163033.1-201ENSMUST00000218608 157 ntBASIC0.87□□□□□ -2.27
Use1Q9CQ56 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC0.87□□□□□ -2.27
Use1Q9CQ56 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
Use1Q9CQ56 Gm13231-201ENSMUST00000119218 2850 ntBASIC0.86□□□□□ -2.27
Use1Q9CQ56 Gm25938-201ENSMUST00000104139 166 ntBASIC0.86□□□□□ -2.27
Use1Q9CQ56 Gm23705-201ENSMUST00000104370 130 ntBASIC0.86□□□□□ -2.27
Use1Q9CQ56 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
Use1Q9CQ56 Mir1b-201ENSMUST00000117012 122 ntBASIC0.86□□□□□ -2.27
Use1Q9CQ56 Gm11389-201ENSMUST00000121407 430 ntBASIC0.86□□□□□ -2.27
Use1Q9CQ56 Gm26430-201ENSMUST00000178054 107 ntBASIC0.86□□□□□ -2.27
Use1Q9CQ56 Gm42855-201ENSMUST00000197388 253 ntBASIC0.86□□□□□ -2.27
Use1Q9CQ56 AC170600.1-201ENSMUST00000228763 277 ntBASIC0.86□□□□□ -2.27
Use1Q9CQ56 Gm25801-201ENSMUST00000082638 106 ntBASIC0.86□□□□□ -2.27
Use1Q9CQ56 Gm25851-201ENSMUST00000082794 107 ntBASIC0.86□□□□□ -2.27
Use1Q9CQ56 Gm25884-201ENSMUST00000157782 62 ntBASIC0.85□□□□□ -2.27
Use1Q9CQ56 Gm38280-201ENSMUST00000192610 158 ntBASIC0.85□□□□□ -2.27
Use1Q9CQ56 Gm42834-201ENSMUST00000196845 256 ntBASIC0.85□□□□□ -2.27
Use1Q9CQ56 Mir6962-201ENSMUST00000199512 63 ntBASIC0.85□□□□□ -2.27
Use1Q9CQ56 Gm20144-201ENSMUST00000203031 165 ntBASIC0.85□□□□□ -2.27
Use1Q9CQ56 Gm44010-201ENSMUST00000204432 331 ntBASIC0.85□□□□□ -2.27
Use1Q9CQ56 Gm24966-201ENSMUST00000082443 79 ntBASIC0.85□□□□□ -2.27
Use1Q9CQ56 Gm25079-201ENSMUST00000082529 203 ntBASIC0.85□□□□□ -2.27
Use1Q9CQ56 Gm23055-201ENSMUST00000082805 94 ntBASIC0.85□□□□□ -2.27
Use1Q9CQ56 Gm14293-201ENSMUST00000118528 577 ntBASIC0.84□□□□□ -2.27
Use1Q9CQ56 Defb44-ps-201ENSMUST00000126871 219 ntBASIC0.84□□□□□ -2.27
Use1Q9CQ56 Gm25768-201ENSMUST00000158570 98 ntBASIC0.84□□□□□ -2.27
Use1Q9CQ56 Gm27236-201ENSMUST00000184147 442 ntBASIC0.84□□□□□ -2.27
Use1Q9CQ56 Mir7j-201ENSMUST00000184427 122 ntBASIC0.84□□□□□ -2.27
Use1Q9CQ56 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
Use1Q9CQ56 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC0.84□□□□□ -2.27
Use1Q9CQ56 AC117202.2-201ENSMUST00000226491 1101 ntBASIC0.84□□□□□ -2.27
Use1Q9CQ56 Gm24152-201ENSMUST00000082764 163 ntBASIC0.84□□□□□ -2.27
Use1Q9CQ56 Gm24356-201ENSMUST00000082859 106 ntBASIC0.84□□□□□ -2.27
Use1Q9CQ56 Gm25789-201ENSMUST00000083294 76 ntBASIC0.84□□□□□ -2.27
Use1Q9CQ56 Gm23041-201ENSMUST00000083868 106 ntBASIC0.84□□□□□ -2.27
Use1Q9CQ56 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC0.83□□□□□ -2.28
Use1Q9CQ56 Gm25011-201ENSMUST00000158398 126 ntBASIC0.83□□□□□ -2.28
Use1Q9CQ56 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
Use1Q9CQ56 Gm27545-201ENSMUST00000184755 202 ntBASIC0.83□□□□□ -2.28
Use1Q9CQ56 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC0.83□□□□□ -2.28
Use1Q9CQ56 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
Use1Q9CQ56 Gm43487-201ENSMUST00000200331 1031 ntBASIC0.83□□□□□ -2.28
Use1Q9CQ56 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC0.83□□□□□ -2.28
Use1Q9CQ56 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.83□□□□□ -2.28
Use1Q9CQ56 AC098718.1-201ENSMUST00000226166 175 ntBASIC0.83□□□□□ -2.28
Use1Q9CQ56 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
Use1Q9CQ56 Mir133a-1-201ENSMUST00000083465 68 ntBASIC0.83□□□□□ -2.28
Use1Q9CQ56 Gm22544-201ENSMUST00000104349 127 ntBASIC0.82□□□□□ -2.28
Use1Q9CQ56 Gm11792-201ENSMUST00000120640 168 ntBASIC0.82□□□□□ -2.28
Use1Q9CQ56 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC0.82□□□□□ -2.28
Use1Q9CQ56 Gm23016-201ENSMUST00000158431 62 ntBASIC0.82□□□□□ -2.28
Use1Q9CQ56 Gm24277-201ENSMUST00000158661 104 ntBASIC0.82□□□□□ -2.28
Use1Q9CQ56 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.82□□□□□ -2.28
Use1Q9CQ56 Gm23379-201ENSMUST00000180026 107 ntBASIC0.82□□□□□ -2.28
Use1Q9CQ56 Gm28661-201ENSMUST00000188231 681 ntBASIC0.82□□□□□ -2.28
Use1Q9CQ56 Gm28648-201ENSMUST00000190092 343 ntBASIC0.82□□□□□ -2.28
Use1Q9CQ56 Gm28992-201ENSMUST00000190534 139 ntBASIC0.82□□□□□ -2.28
Use1Q9CQ56 Gm37713-201ENSMUST00000191746 198 ntBASIC0.82□□□□□ -2.28
Use1Q9CQ56 Gm38323-201ENSMUST00000192450 210 ntBASIC0.82□□□□□ -2.28
Use1Q9CQ56 AC155712.1-201ENSMUST00000219704 160 ntBASIC0.82□□□□□ -2.28
Use1Q9CQ56 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.82□□□□□ -2.28
Use1Q9CQ56 Gm25513-201ENSMUST00000083861 162 ntBASIC0.82□□□□□ -2.28
Use1Q9CQ56 Gm15102-201ENSMUST00000118740 1502 ntBASIC0.82□□□□□ -2.28
Use1Q9CQ56 Gm15101-201ENSMUST00000178818 1502 ntBASIC0.82□□□□□ -2.28
Use1Q9CQ56 Gm22113-201ENSMUST00000158343 104 ntBASIC0.81□□□□□ -2.28
Use1Q9CQ56 Gm23114-201ENSMUST00000158478 117 ntBASIC0.81□□□□□ -2.28
Use1Q9CQ56 Gm26652-202ENSMUST00000181672 475 ntBASIC0.81□□□□□ -2.28
Use1Q9CQ56 Mir6346-201ENSMUST00000183982 81 ntBASIC0.81□□□□□ -2.28
Use1Q9CQ56 Mir7050-201ENSMUST00000184636 60 ntBASIC0.81□□□□□ -2.28
Use1Q9CQ56 Gm29022-201ENSMUST00000190702 225 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms