Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Gm24668-201ENSMUST00000158935 104 ntBASIC1.39□□□□□ -2.19
Sf3b1Q99NB9 Gm24810-201ENSMUST00000175317 70 ntBASIC1.39□□□□□ -2.19
Sf3b1Q99NB9 Mir3968-201ENSMUST00000175355 100 ntBASIC1.39□□□□□ -2.19
Sf3b1Q99NB9 Gm17067-202ENSMUST00000180131 123 ntBASIC1.39□□□□□ -2.19
Sf3b1Q99NB9 Gm29603-201ENSMUST00000186792 334 ntBASIC1.39□□□□□ -2.19
Sf3b1Q99NB9 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.39□□□□□ -2.19
Sf3b1Q99NB9 Snord14a-201ENSMUST00000082807 87 ntBASIC1.39□□□□□ -2.19
Sf3b1Q99NB9 Gm24356-201ENSMUST00000082859 106 ntBASIC1.39□□□□□ -2.19
Sf3b1Q99NB9 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
Sf3b1Q99NB9 Gm12309-201ENSMUST00000119889 182 ntBASIC1.38□□□□□ -2.19
Sf3b1Q99NB9 Gm23329-201ENSMUST00000157415 108 ntBASIC1.38□□□□□ -2.19
Sf3b1Q99NB9 Gm24498-201ENSMUST00000158445 102 ntBASIC1.38□□□□□ -2.19
Sf3b1Q99NB9 Gm23208-201ENSMUST00000158666 127 ntBASIC1.38□□□□□ -2.19
Sf3b1Q99NB9 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC1.38□□□□□ -2.19
Sf3b1Q99NB9 Gm24487-201ENSMUST00000178017 63 ntBASIC1.38□□□□□ -2.19
Sf3b1Q99NB9 Gm27793-201ENSMUST00000183405 76 ntBASIC1.38□□□□□ -2.19
Sf3b1Q99NB9 Mir7059-201ENSMUST00000184825 59 ntBASIC1.38□□□□□ -2.19
Sf3b1Q99NB9 Gm29661-201ENSMUST00000186781 315 ntBASIC1.38□□□□□ -2.19
Sf3b1Q99NB9 Gm20257-202ENSMUST00000188643 130 ntBASIC1.38□□□□□ -2.19
Sf3b1Q99NB9 Gm29308-201ENSMUST00000188863 315 ntBASIC1.38□□□□□ -2.19
Sf3b1Q99NB9 Gm37337-201ENSMUST00000192601 993 ntBASIC1.38□□□□□ -2.19
Sf3b1Q99NB9 Gm10092-201ENSMUST00000077110 180 ntBASIC1.38□□□□□ -2.19
Sf3b1Q99NB9 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.37□□□□□ -2.19
Sf3b1Q99NB9 Gm25423-201ENSMUST00000157609 107 ntBASIC1.37□□□□□ -2.19
Sf3b1Q99NB9 Gm22447-201ENSMUST00000158155 92 ntBASIC1.37□□□□□ -2.19
Sf3b1Q99NB9 Gm27271-201ENSMUST00000183509 170 ntBASIC1.37□□□□□ -2.19
Sf3b1Q99NB9 Gm29613-201ENSMUST00000185846 313 ntBASIC1.37□□□□□ -2.19
Sf3b1Q99NB9 Gm29544-201ENSMUST00000188860 313 ntBASIC1.37□□□□□ -2.19
Sf3b1Q99NB9 Gm28414-201ENSMUST00000190111 294 ntBASIC1.37□□□□□ -2.19
Sf3b1Q99NB9 Gm28808-201ENSMUST00000190978 313 ntBASIC1.37□□□□□ -2.19
Sf3b1Q99NB9 Gm42622-201ENSMUST00000197229 355 ntBASIC1.37□□□□□ -2.19
Sf3b1Q99NB9 Gm45116-201ENSMUST00000207392 275 ntBASIC1.37□□□□□ -2.19
Sf3b1Q99NB9 Gm44960-201ENSMUST00000207403 141 ntBASIC1.37□□□□□ -2.19
Sf3b1Q99NB9 Gm45878-201ENSMUST00000211839 241 ntBASIC1.37□□□□□ -2.19
Sf3b1Q99NB9 Gm5023-201ENSMUST00000217442 587 ntBASIC1.37□□□□□ -2.19
Sf3b1Q99NB9 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
Sf3b1Q99NB9 Gm25357-201ENSMUST00000082745 72 ntBASIC1.37□□□□□ -2.19
Sf3b1Q99NB9 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.37□□□□□ -2.19
Sf3b1Q99NB9 Mir293-201ENSMUST00000104841 80 ntBASIC1.36□□□□□ -2.19
Sf3b1Q99NB9 Gm22709-201ENSMUST00000116893 111 ntBASIC1.36□□□□□ -2.19
Sf3b1Q99NB9 Gm28110-201ENSMUST00000185782 315 ntBASIC1.36□□□□□ -2.19
Sf3b1Q99NB9 Gm29057-201ENSMUST00000186468 315 ntBASIC1.36□□□□□ -2.19
Sf3b1Q99NB9 Gm28737-201ENSMUST00000186808 315 ntBASIC1.36□□□□□ -2.19
Sf3b1Q99NB9 Gm29147-201ENSMUST00000186846 315 ntBASIC1.36□□□□□ -2.19
Sf3b1Q99NB9 Gm29118-201ENSMUST00000186908 315 ntBASIC1.36□□□□□ -2.19
Sf3b1Q99NB9 Gm28433-201ENSMUST00000187085 315 ntBASIC1.36□□□□□ -2.19
Sf3b1Q99NB9 Gm29227-201ENSMUST00000187139 315 ntBASIC1.36□□□□□ -2.19
Sf3b1Q99NB9 Gm28759-201ENSMUST00000187621 315 ntBASIC1.36□□□□□ -2.19
Sf3b1Q99NB9 Gm28831-201ENSMUST00000187739 315 ntBASIC1.36□□□□□ -2.19
Sf3b1Q99NB9 Gm29034-201ENSMUST00000188099 315 ntBASIC1.36□□□□□ -2.19
Sf3b1Q99NB9 Gm28752-201ENSMUST00000188340 315 ntBASIC1.36□□□□□ -2.19
Sf3b1Q99NB9 Gm28569-201ENSMUST00000188748 315 ntBASIC1.36□□□□□ -2.19
Sf3b1Q99NB9 Gm28120-201ENSMUST00000188812 315 ntBASIC1.36□□□□□ -2.19
Sf3b1Q99NB9 Gm28369-201ENSMUST00000188993 315 ntBASIC1.36□□□□□ -2.19
Sf3b1Q99NB9 Gm28537-201ENSMUST00000189026 315 ntBASIC1.36□□□□□ -2.19
Sf3b1Q99NB9 Gm28861-201ENSMUST00000189681 315 ntBASIC1.36□□□□□ -2.19
Sf3b1Q99NB9 Gm28717-201ENSMUST00000189950 315 ntBASIC1.36□□□□□ -2.19
Sf3b1Q99NB9 Gm29180-201ENSMUST00000190003 315 ntBASIC1.36□□□□□ -2.19
Sf3b1Q99NB9 Gm29575-201ENSMUST00000190597 315 ntBASIC1.36□□□□□ -2.19
Sf3b1Q99NB9 Gm29631-201ENSMUST00000191065 315 ntBASIC1.36□□□□□ -2.19
Sf3b1Q99NB9 Gm28160-201ENSMUST00000191229 315 ntBASIC1.36□□□□□ -2.19
Sf3b1Q99NB9 Gm29469-201ENSMUST00000191448 315 ntBASIC1.36□□□□□ -2.19
Sf3b1Q99NB9 Gm37918-201ENSMUST00000192071 120 ntBASIC1.36□□□□□ -2.19
Sf3b1Q99NB9 Gm37129-201ENSMUST00000195791 315 ntBASIC1.36□□□□□ -2.19
Sf3b1Q99NB9 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.36□□□□□ -2.19
Sf3b1Q99NB9 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Sf3b1Q99NB9 AC102369.1-201ENSMUST00000218415 373 ntBASIC1.36□□□□□ -2.19
Sf3b1Q99NB9 Gm24252-201ENSMUST00000083700 132 ntBASIC1.36□□□□□ -2.19
Sf3b1Q99NB9 BC022960-201ENSMUST00000119987 1815 ntBASIC1.35□□□□□ -2.19
Sf3b1Q99NB9 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.35□□□□□ -2.19
Sf3b1Q99NB9 Gm25434-201ENSMUST00000158278 167 ntBASIC1.35□□□□□ -2.19
Sf3b1Q99NB9 Gm26029-201ENSMUST00000158659 132 ntBASIC1.35□□□□□ -2.19
Sf3b1Q99NB9 Gm27410-201ENSMUST00000183851 115 ntBASIC1.35□□□□□ -2.19
Sf3b1Q99NB9 Mir7063-201ENSMUST00000184158 91 ntBASIC1.35□□□□□ -2.19
Sf3b1Q99NB9 Gm28927-201ENSMUST00000191528 272 ntBASIC1.35□□□□□ -2.19
Sf3b1Q99NB9 Gm37693-201ENSMUST00000194562 234 ntBASIC1.35□□□□□ -2.19
Sf3b1Q99NB9 Gm5010-201ENSMUST00000213131 260 ntBASIC1.35□□□□□ -2.19
Sf3b1Q99NB9 AC164086.1-201ENSMUST00000221038 289 ntBASIC1.35□□□□□ -2.19
Sf3b1Q99NB9 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Sf3b1Q99NB9 Gm10033-201ENSMUST00000072427 1813 ntBASIC1.34□□□□□ -2.19
Sf3b1Q99NB9 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.34□□□□□ -2.2
Sf3b1Q99NB9 Gm11859-201ENSMUST00000118099 455 ntBASIC1.34□□□□□ -2.2
Sf3b1Q99NB9 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.34□□□□□ -2.2
Sf3b1Q99NB9 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
Sf3b1Q99NB9 Gm23636-201ENSMUST00000175070 95 ntBASIC1.34□□□□□ -2.2
Sf3b1Q99NB9 Gm20144-201ENSMUST00000203031 165 ntBASIC1.34□□□□□ -2.2
Sf3b1Q99NB9 Gm22685-201ENSMUST00000082848 106 ntBASIC1.34□□□□□ -2.2
Sf3b1Q99NB9 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
Sf3b1Q99NB9 Gm22935-201ENSMUST00000103960 104 ntBASIC1.33□□□□□ -2.2
Sf3b1Q99NB9 Gm24379-201ENSMUST00000122695 86 ntBASIC1.33□□□□□ -2.2
Sf3b1Q99NB9 Gm25805-201ENSMUST00000122788 108 ntBASIC1.33□□□□□ -2.2
Sf3b1Q99NB9 Mir8116-201ENSMUST00000184134 97 ntBASIC1.33□□□□□ -2.2
Sf3b1Q99NB9 Gm43472-201ENSMUST00000200175 154 ntBASIC1.33□□□□□ -2.2
Sf3b1Q99NB9 Gm25789-201ENSMUST00000083294 76 ntBASIC1.33□□□□□ -2.2
Sf3b1Q99NB9 Gm11798-201ENSMUST00000119150 421 ntBASIC1.32□□□□□ -2.2
Sf3b1Q99NB9 Gm12143-201ENSMUST00000119666 332 ntBASIC1.32□□□□□ -2.2
Sf3b1Q99NB9 Gm14301-201ENSMUST00000120181 324 ntBASIC1.32□□□□□ -2.2
Sf3b1Q99NB9 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.32□□□□□ -2.2
Sf3b1Q99NB9 Gm24366-201ENSMUST00000175383 86 ntBASIC1.32□□□□□ -2.2
Sf3b1Q99NB9 Gm21064-202ENSMUST00000190583 278 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms