Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm25495-201ENSMUST00000104431 131 ntBASIC1.49□□□□□ -2.17
Cdk5rap3Q99LM2 Gm23907-201ENSMUST00000104595 189 ntBASIC1.49□□□□□ -2.17
Cdk5rap3Q99LM2 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC1.49□□□□□ -2.17
Cdk5rap3Q99LM2 Gm28409-201ENSMUST00000187064 103 ntBASIC1.49□□□□□ -2.17
Cdk5rap3Q99LM2 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.49□□□□□ -2.17
Cdk5rap3Q99LM2 AC130829.3-201ENSMUST00000222735 154 ntBASIC1.49□□□□□ -2.17
Cdk5rap3Q99LM2 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Cdk5rap3Q99LM2 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Cdk5rap3Q99LM2 Mir465b-1-201ENSMUST00000103940 79 ntBASIC1.48□□□□□ -2.17
Cdk5rap3Q99LM2 Mir465b-2-201ENSMUST00000104662 79 ntBASIC1.48□□□□□ -2.17
Cdk5rap3Q99LM2 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.48□□□□□ -2.17
Cdk5rap3Q99LM2 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.48□□□□□ -2.17
Cdk5rap3Q99LM2 Gm24394-201ENSMUST00000158141 123 ntBASIC1.48□□□□□ -2.17
Cdk5rap3Q99LM2 Traj60-201ENSMUST00000167781 54 ntBASIC1.48□□□□□ -2.17
Cdk5rap3Q99LM2 Gm28992-201ENSMUST00000190534 139 ntBASIC1.48□□□□□ -2.17
Cdk5rap3Q99LM2 Gm38050-201ENSMUST00000191904 238 ntBASIC1.48□□□□□ -2.17
Cdk5rap3Q99LM2 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.48□□□□□ -2.17
Cdk5rap3Q99LM2 Gm45116-201ENSMUST00000207392 275 ntBASIC1.48□□□□□ -2.17
Cdk5rap3Q99LM2 Gm19855-201ENSMUST00000210145 249 ntBASIC1.48□□□□□ -2.17
Cdk5rap3Q99LM2 Mir32-201ENSMUST00000083610 70 ntBASIC1.48□□□□□ -2.17
Cdk5rap3Q99LM2 Gm11857-201ENSMUST00000119817 324 ntBASIC1.47□□□□□ -2.17
Cdk5rap3Q99LM2 Mir7026-201ENSMUST00000184384 67 ntBASIC1.47□□□□□ -2.17
Cdk5rap3Q99LM2 Gm37089-201ENSMUST00000195616 129 ntBASIC1.47□□□□□ -2.17
Cdk5rap3Q99LM2 Gm43238-201ENSMUST00000196463 359 ntBASIC1.47□□□□□ -2.17
Cdk5rap3Q99LM2 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.47□□□□□ -2.17
Cdk5rap3Q99LM2 Gm45296-201ENSMUST00000209625 205 ntBASIC1.47□□□□□ -2.17
Cdk5rap3Q99LM2 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.47□□□□□ -2.17
Cdk5rap3Q99LM2 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.46□□□□□ -2.18
Cdk5rap3Q99LM2 Gm44149-201ENSMUST00000204256 226 ntBASIC1.46□□□□□ -2.18
Cdk5rap3Q99LM2 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC1.46□□□□□ -2.18
Cdk5rap3Q99LM2 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Cdk5rap3Q99LM2 Mir496a-201ENSMUST00000093627 79 ntBASIC1.46□□□□□ -2.18
Cdk5rap3Q99LM2 Gm24163-201ENSMUST00000093660 132 ntBASIC1.46□□□□□ -2.18
Cdk5rap3Q99LM2 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.46□□□□□ -2.18
Cdk5rap3Q99LM2 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Cdk5rap3Q99LM2 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.45□□□□□ -2.18
Cdk5rap3Q99LM2 Mir544-201ENSMUST00000103813 78 ntBASIC1.45□□□□□ -2.18
Cdk5rap3Q99LM2 Gm23013-201ENSMUST00000104146 106 ntBASIC1.45□□□□□ -2.18
Cdk5rap3Q99LM2 Gm42606-201ENSMUST00000114209 239 ntBASIC1.45□□□□□ -2.18
Cdk5rap3Q99LM2 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC1.45□□□□□ -2.18
Cdk5rap3Q99LM2 Gm37579-201ENSMUST00000194291 142 ntBASIC1.45□□□□□ -2.18
Cdk5rap3Q99LM2 Igkv4-65-201ENSMUST00000196986 358 ntBASIC1.45□□□□□ -2.18
Cdk5rap3Q99LM2 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.45□□□□□ -2.18
Cdk5rap3Q99LM2 Gm43220-201ENSMUST00000199299 282 ntBASIC1.45□□□□□ -2.18
Cdk5rap3Q99LM2 Gm18617-201ENSMUST00000222311 259 ntBASIC1.45□□□□□ -2.18
Cdk5rap3Q99LM2 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.45□□□□□ -2.18
Cdk5rap3Q99LM2 Gm25038-201ENSMUST00000082928 130 ntBASIC1.45□□□□□ -2.18
Cdk5rap3Q99LM2 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.44□□□□□ -2.18
Cdk5rap3Q99LM2 Gm23010-201ENSMUST00000104151 126 ntBASIC1.44□□□□□ -2.18
Cdk5rap3Q99LM2 Gm14574-201ENSMUST00000120644 279 ntBASIC1.44□□□□□ -2.18
Cdk5rap3Q99LM2 Gm25827-201ENSMUST00000157089 107 ntBASIC1.44□□□□□ -2.18
Cdk5rap3Q99LM2 Gm24277-201ENSMUST00000158661 104 ntBASIC1.44□□□□□ -2.18
Cdk5rap3Q99LM2 Gm37399-201ENSMUST00000195224 416 ntBASIC1.44□□□□□ -2.18
Cdk5rap3Q99LM2 Rny3-201ENSMUST00000083011 102 ntBASIC1.44□□□□□ -2.18
Cdk5rap3Q99LM2 AC160115.1-201ENSMUST00000224678 1574 ntBASIC1.43□□□□□ -2.18
Cdk5rap3Q99LM2 Gm23951-201ENSMUST00000104029 132 ntBASIC1.43□□□□□ -2.18
Cdk5rap3Q99LM2 Gm13967-201ENSMUST00000120404 380 ntBASIC1.43□□□□□ -2.18
Cdk5rap3Q99LM2 Gm15214-201ENSMUST00000122155 470 ntBASIC1.43□□□□□ -2.18
Cdk5rap3Q99LM2 Gm24211-201ENSMUST00000158264 107 ntBASIC1.43□□□□□ -2.18
Cdk5rap3Q99LM2 Mir7093-201ENSMUST00000184195 101 ntBASIC1.43□□□□□ -2.18
Cdk5rap3Q99LM2 Gm44483-201ENSMUST00000197203 97 ntBASIC1.43□□□□□ -2.18
Cdk5rap3Q99LM2 AC125311.1-201ENSMUST00000226950 220 ntBASIC1.43□□□□□ -2.18
Cdk5rap3Q99LM2 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Cdk5rap3Q99LM2 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.43□□□□□ -2.18
Cdk5rap3Q99LM2 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Cdk5rap3Q99LM2 Gm23836-201ENSMUST00000104434 129 ntBASIC1.42□□□□□ -2.18
Cdk5rap3Q99LM2 Gm3788-201ENSMUST00000119949 136 ntBASIC1.42□□□□□ -2.18
Cdk5rap3Q99LM2 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
Cdk5rap3Q99LM2 Gm23048-201ENSMUST00000157237 129 ntBASIC1.42□□□□□ -2.18
Cdk5rap3Q99LM2 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC1.42□□□□□ -2.18
Cdk5rap3Q99LM2 Snord96a-201ENSMUST00000082791 81 ntBASIC1.42□□□□□ -2.18
Cdk5rap3Q99LM2 Gm22365-201ENSMUST00000093750 117 ntBASIC1.42□□□□□ -2.18
Cdk5rap3Q99LM2 Gm16358-201ENSMUST00000146046 210 ntBASIC1.41□□□□□ -2.18
Cdk5rap3Q99LM2 Gm24915-201ENSMUST00000157288 78 ntBASIC1.41□□□□□ -2.18
Cdk5rap3Q99LM2 Gm26038-201ENSMUST00000158151 106 ntBASIC1.41□□□□□ -2.18
Cdk5rap3Q99LM2 Gm22537-201ENSMUST00000158172 199 ntBASIC1.41□□□□□ -2.18
Cdk5rap3Q99LM2 Gm22164-201ENSMUST00000158413 106 ntBASIC1.41□□□□□ -2.18
Cdk5rap3Q99LM2 Gm23339-201ENSMUST00000158962 139 ntBASIC1.41□□□□□ -2.18
Cdk5rap3Q99LM2 Gm26400-201ENSMUST00000175012 85 ntBASIC1.41□□□□□ -2.18
Cdk5rap3Q99LM2 Gm25958-201ENSMUST00000175114 71 ntBASIC1.41□□□□□ -2.18
Cdk5rap3Q99LM2 Gm27493-201ENSMUST00000184128 78 ntBASIC1.41□□□□□ -2.18
Cdk5rap3Q99LM2 Gm43250-201ENSMUST00000196536 273 ntBASIC1.41□□□□□ -2.18
Cdk5rap3Q99LM2 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.41□□□□□ -2.18
Cdk5rap3Q99LM2 Gm24038-201ENSMUST00000082872 159 ntBASIC1.41□□□□□ -2.18
Cdk5rap3Q99LM2 Gm26339-201ENSMUST00000102368 99 ntBASIC1.4□□□□□ -2.19
Cdk5rap3Q99LM2 Gm12309-201ENSMUST00000119889 182 ntBASIC1.4□□□□□ -2.19
Cdk5rap3Q99LM2 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.4□□□□□ -2.19
Cdk5rap3Q99LM2 Gm25982-201ENSMUST00000157920 101 ntBASIC1.4□□□□□ -2.19
Cdk5rap3Q99LM2 Gm23921-201ENSMUST00000175258 107 ntBASIC1.4□□□□□ -2.19
Cdk5rap3Q99LM2 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC1.4□□□□□ -2.19
Cdk5rap3Q99LM2 Gm21064-202ENSMUST00000190583 278 ntBASIC1.4□□□□□ -2.19
Cdk5rap3Q99LM2 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.4□□□□□ -2.19
Cdk5rap3Q99LM2 Gm25929-201ENSMUST00000082784 107 ntBASIC1.4□□□□□ -2.19
Cdk5rap3Q99LM2 Gm24043-201ENSMUST00000083108 116 ntBASIC1.4□□□□□ -2.19
Cdk5rap3Q99LM2 Gm26329-201ENSMUST00000093723 110 ntBASIC1.4□□□□□ -2.19
Cdk5rap3Q99LM2 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Cdk5rap3Q99LM2 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC1.39□□□□□ -2.19
Cdk5rap3Q99LM2 Gm22663-201ENSMUST00000158721 102 ntBASIC1.39□□□□□ -2.19
Cdk5rap3Q99LM2 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.39□□□□□ -2.19
Cdk5rap3Q99LM2 Gm27711-201ENSMUST00000183802 118 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 223.3 ms