Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.46□□□□□ -2.18
Cstf1Q99LC2 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.46□□□□□ -2.18
Cstf1Q99LC2 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Cstf1Q99LC2 Gm4746-201ENSMUST00000120395 2406 ntBASIC1.45□□□□□ -2.18
Cstf1Q99LC2 Mir1936-201ENSMUST00000158699 93 ntBASIC1.45□□□□□ -2.18
Cstf1Q99LC2 Gm24229-201ENSMUST00000158830 118 ntBASIC1.45□□□□□ -2.18
Cstf1Q99LC2 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC1.45□□□□□ -2.18
Cstf1Q99LC2 Gm24810-201ENSMUST00000175317 70 ntBASIC1.45□□□□□ -2.18
Cstf1Q99LC2 Gm22510-201ENSMUST00000179304 79 ntBASIC1.45□□□□□ -2.18
Cstf1Q99LC2 Gm26336-201ENSMUST00000179449 79 ntBASIC1.45□□□□□ -2.18
Cstf1Q99LC2 Gm26390-201ENSMUST00000179628 79 ntBASIC1.45□□□□□ -2.18
Cstf1Q99LC2 Gm26265-202ENSMUST00000196326 133 ntBASIC1.45□□□□□ -2.18
Cstf1Q99LC2 Gm33866-201ENSMUST00000196911 289 ntBASIC1.45□□□□□ -2.18
Cstf1Q99LC2 Gm33654-201ENSMUST00000221704 215 ntBASIC1.45□□□□□ -2.18
Cstf1Q99LC2 Gm21937-201ENSMUST00000222825 218 ntBASIC1.45□□□□□ -2.18
Cstf1Q99LC2 AC151833.1-201ENSMUST00000227752 574 ntBASIC1.45□□□□□ -2.18
Cstf1Q99LC2 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Cstf1Q99LC2 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Cstf1Q99LC2 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.44□□□□□ -2.18
Cstf1Q99LC2 Mir374b-201ENSMUST00000102314 95 ntBASIC1.44□□□□□ -2.18
Cstf1Q99LC2 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Cstf1Q99LC2 Gm11862-201ENSMUST00000119678 659 ntBASIC1.44□□□□□ -2.18
Cstf1Q99LC2 Gm14972-201ENSMUST00000121780 364 ntBASIC1.44□□□□□ -2.18
Cstf1Q99LC2 Gm24630-201ENSMUST00000122768 106 ntBASIC1.44□□□□□ -2.18
Cstf1Q99LC2 Gm23170-201ENSMUST00000157158 106 ntBASIC1.44□□□□□ -2.18
Cstf1Q99LC2 Gm22791-201ENSMUST00000157232 145 ntBASIC1.44□□□□□ -2.18
Cstf1Q99LC2 Gm22315-201ENSMUST00000158010 143 ntBASIC1.44□□□□□ -2.18
Cstf1Q99LC2 Gm24799-201ENSMUST00000178431 79 ntBASIC1.44□□□□□ -2.18
Cstf1Q99LC2 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
Cstf1Q99LC2 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.44□□□□□ -2.18
Cstf1Q99LC2 Gm44962-201ENSMUST00000206460 279 ntBASIC1.44□□□□□ -2.18
Cstf1Q99LC2 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
Cstf1Q99LC2 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.44□□□□□ -2.18
Cstf1Q99LC2 Gm23140-201ENSMUST00000082487 107 ntBASIC1.44□□□□□ -2.18
Cstf1Q99LC2 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.44□□□□□ -2.18
Cstf1Q99LC2 Gm42755-201ENSMUST00000198533 1493 ntBASIC1.43□□□□□ -2.18
Cstf1Q99LC2 Gm22780-201ENSMUST00000104084 132 ntBASIC1.43□□□□□ -2.18
Cstf1Q99LC2 Gm14906-201ENSMUST00000119265 390 ntBASIC1.43□□□□□ -2.18
Cstf1Q99LC2 Gm15861-201ENSMUST00000120979 339 ntBASIC1.43□□□□□ -2.18
Cstf1Q99LC2 Gm22027-201ENSMUST00000122737 127 ntBASIC1.43□□□□□ -2.18
Cstf1Q99LC2 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.43□□□□□ -2.18
Cstf1Q99LC2 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.43□□□□□ -2.18
Cstf1Q99LC2 Gm20462-201ENSMUST00000172623 408 ntBASIC1.43□□□□□ -2.18
Cstf1Q99LC2 Gm23636-201ENSMUST00000175070 95 ntBASIC1.43□□□□□ -2.18
Cstf1Q99LC2 Gm22565-201ENSMUST00000175540 69 ntBASIC1.43□□□□□ -2.18
Cstf1Q99LC2 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
Cstf1Q99LC2 Gm17067-202ENSMUST00000180131 123 ntBASIC1.43□□□□□ -2.18
Cstf1Q99LC2 Mir7093-201ENSMUST00000184195 101 ntBASIC1.43□□□□□ -2.18
Cstf1Q99LC2 Gm43624-201ENSMUST00000197368 180 ntBASIC1.43□□□□□ -2.18
Cstf1Q99LC2 Gm45907-201ENSMUST00000213023 193 ntBASIC1.43□□□□□ -2.18
Cstf1Q99LC2 Gm18188-201ENSMUST00000219386 478 ntBASIC1.43□□□□□ -2.18
Cstf1Q99LC2 Snord118-201ENSMUST00000082965 135 ntBASIC1.43□□□□□ -2.18
Cstf1Q99LC2 Gm24615-201ENSMUST00000083268 113 ntBASIC1.43□□□□□ -2.18
Cstf1Q99LC2 Gm23041-201ENSMUST00000083868 106 ntBASIC1.43□□□□□ -2.18
Cstf1Q99LC2 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Cstf1Q99LC2 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Cstf1Q99LC2 Gm42606-201ENSMUST00000114209 239 ntBASIC1.42□□□□□ -2.18
Cstf1Q99LC2 Gm23656-201ENSMUST00000122626 112 ntBASIC1.42□□□□□ -2.18
Cstf1Q99LC2 Gm23390-201ENSMUST00000157393 106 ntBASIC1.42□□□□□ -2.18
Cstf1Q99LC2 Gm23083-201ENSMUST00000157851 116 ntBASIC1.42□□□□□ -2.18
Cstf1Q99LC2 Gm43976-201ENSMUST00000203637 235 ntBASIC1.42□□□□□ -2.18
Cstf1Q99LC2 Gm44687-201ENSMUST00000204975 235 ntBASIC1.42□□□□□ -2.18
Cstf1Q99LC2 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.42□□□□□ -2.18
Cstf1Q99LC2 Gm16976-205ENSMUST00000227324 226 ntBASIC1.42□□□□□ -2.18
Cstf1Q99LC2 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.42□□□□□ -2.18
Cstf1Q99LC2 Gm25992-201ENSMUST00000102437 109 ntBASIC1.41□□□□□ -2.18
Cstf1Q99LC2 Gm11420-201ENSMUST00000120047 402 ntBASIC1.41□□□□□ -2.18
Cstf1Q99LC2 Gm11606-201ENSMUST00000120706 617 ntBASIC1.41□□□□□ -2.18
Cstf1Q99LC2 Gm11254-201ENSMUST00000122368 653 ntBASIC1.41□□□□□ -2.18
Cstf1Q99LC2 Gm25982-201ENSMUST00000157920 101 ntBASIC1.41□□□□□ -2.18
Cstf1Q99LC2 Gm25491-201ENSMUST00000158733 308 ntBASIC1.41□□□□□ -2.18
Cstf1Q99LC2 Gm27845-201ENSMUST00000184479 114 ntBASIC1.41□□□□□ -2.18
Cstf1Q99LC2 Gm28453-203ENSMUST00000187041 189 ntBASIC1.41□□□□□ -2.18
Cstf1Q99LC2 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.41□□□□□ -2.18
Cstf1Q99LC2 Gm28211-201ENSMUST00000190920 315 ntBASIC1.41□□□□□ -2.18
Cstf1Q99LC2 Gm44458-201ENSMUST00000196594 143 ntBASIC1.41□□□□□ -2.18
Cstf1Q99LC2 Gm23370-201ENSMUST00000199545 130 ntBASIC1.41□□□□□ -2.18
Cstf1Q99LC2 Gm35736-201ENSMUST00000203681 313 ntBASIC1.41□□□□□ -2.18
Cstf1Q99LC2 Gm45456-201ENSMUST00000210841 243 ntBASIC1.41□□□□□ -2.18
Cstf1Q99LC2 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.41□□□□□ -2.18
Cstf1Q99LC2 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC1.41□□□□□ -2.18
Cstf1Q99LC2 Gm30155-201ENSMUST00000223458 339 ntBASIC1.41□□□□□ -2.18
Cstf1Q99LC2 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.41□□□□□ -2.18
Cstf1Q99LC2 Gm22685-201ENSMUST00000082848 106 ntBASIC1.41□□□□□ -2.18
Cstf1Q99LC2 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Cstf1Q99LC2 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.4□□□□□ -2.19
Cstf1Q99LC2 Gm14923-201ENSMUST00000118270 155 ntBASIC1.4□□□□□ -2.19
Cstf1Q99LC2 Gm9059-201ENSMUST00000118319 183 ntBASIC1.4□□□□□ -2.19
Cstf1Q99LC2 Gm24895-201ENSMUST00000122742 74 ntBASIC1.4□□□□□ -2.19
Cstf1Q99LC2 Gm26159-201ENSMUST00000158968 104 ntBASIC1.4□□□□□ -2.19
Cstf1Q99LC2 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Cstf1Q99LC2 Gm7654-201ENSMUST00000186738 683 ntBASIC1.4□□□□□ -2.19
Cstf1Q99LC2 Gm29603-201ENSMUST00000186792 334 ntBASIC1.4□□□□□ -2.19
Cstf1Q99LC2 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Cstf1Q99LC2 Gm28414-201ENSMUST00000190111 294 ntBASIC1.4□□□□□ -2.19
Cstf1Q99LC2 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Cstf1Q99LC2 Gm44654-201ENSMUST00000208052 329 ntBASIC1.4□□□□□ -2.19
Cstf1Q99LC2 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.4□□□□□ -2.19
Cstf1Q99LC2 AC164086.1-201ENSMUST00000221038 289 ntBASIC1.4□□□□□ -2.19
Cstf1Q99LC2 AC173345.2-201ENSMUST00000222795 153 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 168.5 ms