Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm24900-201ENSMUST00000158128 134 ntBASIC2.27□□□□□ -2.05
Usp11Q99K46 Gm25749-201ENSMUST00000175485 111 ntBASIC2.27□□□□□ -2.05
Usp11Q99K46 Gm20630-201ENSMUST00000177387 551 ntBASIC2.27□□□□□ -2.05
Usp11Q99K46 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.27□□□□□ -2.05
Usp11Q99K46 Gm25253-201ENSMUST00000179958 107 ntBASIC2.27□□□□□ -2.05
Usp11Q99K46 Gm27793-201ENSMUST00000183405 76 ntBASIC2.27□□□□□ -2.05
Usp11Q99K46 Gm27399-201ENSMUST00000184250 78 ntBASIC2.27□□□□□ -2.05
Usp11Q99K46 Ighv12-2-201ENSMUST00000191949 362 ntBASIC2.27□□□□□ -2.05
Usp11Q99K46 Mir1291-201ENSMUST00000199842 117 ntBASIC2.27□□□□□ -2.05
Usp11Q99K46 Mir497-201ENSMUST00000200557 84 ntBASIC2.27□□□□□ -2.05
Usp11Q99K46 Gm45907-201ENSMUST00000213023 193 ntBASIC2.27□□□□□ -2.05
Usp11Q99K46 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.27□□□□□ -2.05
Usp11Q99K46 Gm24204-201ENSMUST00000082950 107 ntBASIC2.27□□□□□ -2.05
Usp11Q99K46 Snora34-201ENSMUST00000083402 138 ntBASIC2.27□□□□□ -2.05
Usp11Q99K46 Gm23039-201ENSMUST00000083870 161 ntBASIC2.27□□□□□ -2.05
Usp11Q99K46 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Usp11Q99K46 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.27□□□□□ -2.05
Usp11Q99K46 Gm25565-201ENSMUST00000104605 105 ntBASIC2.26□□□□□ -2.05
Usp11Q99K46 Gm24896-201ENSMUST00000122741 135 ntBASIC2.26□□□□□ -2.05
Usp11Q99K46 Gm22433-201ENSMUST00000158550 142 ntBASIC2.26□□□□□ -2.05
Usp11Q99K46 Mir1936-201ENSMUST00000158699 93 ntBASIC2.26□□□□□ -2.05
Usp11Q99K46 Gm20613-201ENSMUST00000175828 345 ntBASIC2.26□□□□□ -2.05
Usp11Q99K46 Gm24415-201ENSMUST00000180218 107 ntBASIC2.26□□□□□ -2.05
Usp11Q99K46 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.26□□□□□ -2.05
Usp11Q99K46 Gm19123-201ENSMUST00000190716 651 ntBASIC2.26□□□□□ -2.05
Usp11Q99K46 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.26□□□□□ -2.05
Usp11Q99K46 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.26□□□□□ -2.05
Usp11Q99K46 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.25□□□□□ -2.05
Usp11Q99K46 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Usp11Q99K46 Gm23841-201ENSMUST00000116951 114 ntBASIC2.25□□□□□ -2.05
Usp11Q99K46 Gm12721-201ENSMUST00000120621 268 ntBASIC2.25□□□□□ -2.05
Usp11Q99K46 Gm15536-201ENSMUST00000121411 114 ntBASIC2.25□□□□□ -2.05
Usp11Q99K46 n-R5s87-201ENSMUST00000122752 116 ntBASIC2.25□□□□□ -2.05
Usp11Q99K46 Gm22483-201ENSMUST00000157986 274 ntBASIC2.25□□□□□ -2.05
Usp11Q99K46 Gm23219-201ENSMUST00000158123 87 ntBASIC2.25□□□□□ -2.05
Usp11Q99K46 Snord11-201ENSMUST00000158468 84 ntBASIC2.25□□□□□ -2.05
Usp11Q99K46 Gm25488-201ENSMUST00000158728 118 ntBASIC2.25□□□□□ -2.05
Usp11Q99K46 Gm25615-201ENSMUST00000177836 94 ntBASIC2.25□□□□□ -2.05
Usp11Q99K46 Gm25820-202ENSMUST00000197479 128 ntBASIC2.25□□□□□ -2.05
Usp11Q99K46 Gm42774-201ENSMUST00000198854 283 ntBASIC2.25□□□□□ -2.05
Usp11Q99K46 Gm43587-201ENSMUST00000199590 204 ntBASIC2.25□□□□□ -2.05
Usp11Q99K46 Mir7217-201ENSMUST00000200304 62 ntBASIC2.25□□□□□ -2.05
Usp11Q99K46 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.25□□□□□ -2.05
Usp11Q99K46 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Usp11Q99K46 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Usp11Q99K46 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.24□□□□□ -2.05
Usp11Q99K46 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Usp11Q99K46 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Usp11Q99K46 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Usp11Q99K46 n-R5s150-201ENSMUST00000122705 108 ntBASIC2.24□□□□□ -2.05
Usp11Q99K46 Gm25115-201ENSMUST00000157187 140 ntBASIC2.24□□□□□ -2.05
Usp11Q99K46 Gm24006-201ENSMUST00000158462 132 ntBASIC2.24□□□□□ -2.05
Usp11Q99K46 Mir28b-201ENSMUST00000175399 80 ntBASIC2.24□□□□□ -2.05
Usp11Q99K46 Gm24304-201ENSMUST00000177635 107 ntBASIC2.24□□□□□ -2.05
Usp11Q99K46 Gm28627-201ENSMUST00000186141 453 ntBASIC2.24□□□□□ -2.05
Usp11Q99K46 Gm32175-201ENSMUST00000193641 346 ntBASIC2.24□□□□□ -2.05
Usp11Q99K46 Gm42834-201ENSMUST00000196845 256 ntBASIC2.24□□□□□ -2.05
Usp11Q99K46 Gm44477-201ENSMUST00000199661 110 ntBASIC2.24□□□□□ -2.05
Usp11Q99K46 Gm44666-201ENSMUST00000208544 391 ntBASIC2.24□□□□□ -2.05
Usp11Q99K46 Gm19118-201ENSMUST00000222554 98 ntBASIC2.24□□□□□ -2.05
Usp11Q99K46 CT954323.1-201ENSMUST00000222774 229 ntBASIC2.24□□□□□ -2.05
Usp11Q99K46 Gm24625-201ENSMUST00000082622 130 ntBASIC2.24□□□□□ -2.05
Usp11Q99K46 Gm25410-201ENSMUST00000083758 137 ntBASIC2.24□□□□□ -2.05
Usp11Q99K46 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
Usp11Q99K46 Mir669d-201ENSMUST00000104644 121 ntBASIC2.23□□□□□ -2.05
Usp11Q99K46 Gm15162-201ENSMUST00000119325 283 ntBASIC2.23□□□□□ -2.05
Usp11Q99K46 Gm22281-201ENSMUST00000157198 103 ntBASIC2.23□□□□□ -2.05
Usp11Q99K46 Gm28169-201ENSMUST00000190342 345 ntBASIC2.23□□□□□ -2.05
Usp11Q99K46 Gm37918-201ENSMUST00000192071 120 ntBASIC2.23□□□□□ -2.05
Usp11Q99K46 Gm44182-201ENSMUST00000204052 115 ntBASIC2.23□□□□□ -2.05
Usp11Q99K46 Gm44533-201ENSMUST00000207782 268 ntBASIC2.23□□□□□ -2.05
Usp11Q99K46 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.23□□□□□ -2.05
Usp11Q99K46 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Usp11Q99K46 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Usp11Q99K46 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
Usp11Q99K46 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.22□□□□□ -2.05
Usp11Q99K46 Mir541-201ENSMUST00000102097 90 ntBASIC2.22□□□□□ -2.05
Usp11Q99K46 Gm25316-201ENSMUST00000116826 118 ntBASIC2.22□□□□□ -2.05
Usp11Q99K46 Gm23492-201ENSMUST00000116837 115 ntBASIC2.22□□□□□ -2.05
Usp11Q99K46 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Usp11Q99K46 Gm23892-201ENSMUST00000158105 130 ntBASIC2.22□□□□□ -2.05
Usp11Q99K46 Gm24053-201ENSMUST00000158620 105 ntBASIC2.22□□□□□ -2.05
Usp11Q99K46 Gm23002-201ENSMUST00000179221 107 ntBASIC2.22□□□□□ -2.05
Usp11Q99K46 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.22□□□□□ -2.05
Usp11Q99K46 Gm29022-201ENSMUST00000190702 225 ntBASIC2.22□□□□□ -2.05
Usp11Q99K46 AC159896.1-201ENSMUST00000215264 215 ntBASIC2.22□□□□□ -2.05
Usp11Q99K46 Gm25130-201ENSMUST00000082650 156 ntBASIC2.22□□□□□ -2.05
Usp11Q99K46 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.22□□□□□ -2.05
Usp11Q99K46 Snora69-201ENSMUST00000083708 131 ntBASIC2.22□□□□□ -2.05
Usp11Q99K46 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Usp11Q99K46 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Usp11Q99K46 Gm23836-201ENSMUST00000104434 129 ntBASIC2.21□□□□□ -2.06
Usp11Q99K46 Gm12417-201ENSMUST00000119153 403 ntBASIC2.21□□□□□ -2.06
Usp11Q99K46 Gm27421-201ENSMUST00000184729 167 ntBASIC2.21□□□□□ -2.06
Usp11Q99K46 Gm27959-201ENSMUST00000185172 111 ntBASIC2.21□□□□□ -2.06
Usp11Q99K46 Gm37715-201ENSMUST00000193206 235 ntBASIC2.21□□□□□ -2.06
Usp11Q99K46 Gm44482-201ENSMUST00000199232 103 ntBASIC2.21□□□□□ -2.06
Usp11Q99K46 AC166830.2-201ENSMUST00000225821 196 ntBASIC2.21□□□□□ -2.06
Usp11Q99K46 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.2□□□□□ -2.06
Usp11Q99K46 Gm26154-201ENSMUST00000102339 96 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 195 ms