Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Gm37715-201ENSMUST00000193206 235 ntBASIC-0.13□□□□□ -2.43
Cspg4Q8VHY0 AC173482.5-201ENSMUST00000224181 327 ntBASIC-0.13□□□□□ -2.43
Cspg4Q8VHY0 Gm26263-201ENSMUST00000083281 164 ntBASIC-0.13□□□□□ -2.43
Cspg4Q8VHY0 Gm22974-201ENSMUST00000083301 103 ntBASIC-0.13□□□□□ -2.43
Cspg4Q8VHY0 Gm13967-201ENSMUST00000120404 380 ntBASIC-0.13□□□□□ -2.43
Cspg4Q8VHY0 Gm14551-201ENSMUST00000120802 256 ntBASIC-0.13□□□□□ -2.43
Cspg4Q8VHY0 Gm26274-201ENSMUST00000157103 321 ntBASIC-0.13□□□□□ -2.43
Cspg4Q8VHY0 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC-0.13□□□□□ -2.43
Cspg4Q8VHY0 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC-0.13□□□□□ -2.43
Cspg4Q8VHY0 Mir6964-201ENSMUST00000200252 59 ntBASIC-0.13□□□□□ -2.43
Cspg4Q8VHY0 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC-0.13□□□□□ -2.43
Cspg4Q8VHY0 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC-0.13□□□□□ -2.43
Cspg4Q8VHY0 CT030184.1-201ENSMUST00000222393 416 ntBASIC-0.13□□□□□ -2.43
Cspg4Q8VHY0 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC-0.13□□□□□ -2.43
Cspg4Q8VHY0 Gm24430-201ENSMUST00000104077 104 ntBASIC-0.14□□□□□ -2.43
Cspg4Q8VHY0 Gm23589-201ENSMUST00000157660 105 ntBASIC-0.14□□□□□ -2.43
Cspg4Q8VHY0 Gm22076-201ENSMUST00000158601 84 ntBASIC-0.14□□□□□ -2.43
Cspg4Q8VHY0 Scarna3a-201ENSMUST00000158911 140 ntBASIC-0.14□□□□□ -2.43
Cspg4Q8VHY0 Gm22111-201ENSMUST00000178010 79 ntBASIC-0.14□□□□□ -2.43
Cspg4Q8VHY0 Gm23687-201ENSMUST00000178664 79 ntBASIC-0.14□□□□□ -2.43
Cspg4Q8VHY0 Gm24566-201ENSMUST00000179286 79 ntBASIC-0.14□□□□□ -2.43
Cspg4Q8VHY0 Gm23305-201ENSMUST00000179342 79 ntBASIC-0.14□□□□□ -2.43
Cspg4Q8VHY0 Gm26389-201ENSMUST00000179819 79 ntBASIC-0.14□□□□□ -2.43
Cspg4Q8VHY0 Gm22130-201ENSMUST00000179979 79 ntBASIC-0.14□□□□□ -2.43
Cspg4Q8VHY0 Gm22393-201ENSMUST00000180153 79 ntBASIC-0.14□□□□□ -2.43
Cspg4Q8VHY0 Gm25085-201ENSMUST00000180298 79 ntBASIC-0.14□□□□□ -2.43
Cspg4Q8VHY0 Gm29216-201ENSMUST00000187117 492 ntBASIC-0.14□□□□□ -2.43
Cspg4Q8VHY0 Gm38149-201ENSMUST00000191943 339 ntBASIC-0.14□□□□□ -2.43
Cspg4Q8VHY0 Gm44300-201ENSMUST00000196792 121 ntBASIC-0.14□□□□□ -2.43
Cspg4Q8VHY0 Gm6105-201ENSMUST00000200580 624 ntBASIC-0.14□□□□□ -2.43
Cspg4Q8VHY0 AC152979.4-201ENSMUST00000219893 379 ntBASIC-0.14□□□□□ -2.43
Cspg4Q8VHY0 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC-0.14□□□□□ -2.43
Cspg4Q8VHY0 AC158142.3-201ENSMUST00000226230 675 ntBASIC-0.14□□□□□ -2.43
Cspg4Q8VHY0 Gm15175-201ENSMUST00000117629 132 ntBASIC-0.14□□□□□ -2.43
Cspg4Q8VHY0 Gm12045-201ENSMUST00000122122 573 ntBASIC-0.14□□□□□ -2.43
Cspg4Q8VHY0 Gm23829-201ENSMUST00000157392 270 ntBASIC-0.14□□□□□ -2.43
Cspg4Q8VHY0 Gm23587-201ENSMUST00000157658 84 ntBASIC-0.14□□□□□ -2.43
Cspg4Q8VHY0 Gm22239-201ENSMUST00000175220 103 ntBASIC-0.14□□□□□ -2.43
Cspg4Q8VHY0 Gm24168-201ENSMUST00000178825 107 ntBASIC-0.14□□□□□ -2.43
Cspg4Q8VHY0 Mir6355-201ENSMUST00000183687 106 ntBASIC-0.14□□□□□ -2.43
Cspg4Q8VHY0 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC-0.14□□□□□ -2.43
Cspg4Q8VHY0 Gm29022-201ENSMUST00000190702 225 ntBASIC-0.14□□□□□ -2.43
Cspg4Q8VHY0 Gm44324-201ENSMUST00000198517 135 ntBASIC-0.14□□□□□ -2.43
Cspg4Q8VHY0 Gm44488-201ENSMUST00000199467 119 ntBASIC-0.14□□□□□ -2.43
Cspg4Q8VHY0 Gm19572-201ENSMUST00000214326 338 ntBASIC-0.14□□□□□ -2.43
Cspg4Q8VHY0 AC154552.5-201ENSMUST00000222352 207 ntBASIC-0.14□□□□□ -2.43
Cspg4Q8VHY0 Snord69-201ENSMUST00000104024 80 ntBASIC-0.15□□□□□ -2.43
Cspg4Q8VHY0 Gm22520-201ENSMUST00000158269 129 ntBASIC-0.15□□□□□ -2.43
Cspg4Q8VHY0 Mir1961-201ENSMUST00000158643 112 ntBASIC-0.15□□□□□ -2.43
Cspg4Q8VHY0 Gm3221-201ENSMUST00000164869 440 ntBASIC-0.15□□□□□ -2.43
Cspg4Q8VHY0 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC-0.15□□□□□ -2.43
Cspg4Q8VHY0 Mir703-201ENSMUST00000197105 109 ntBASIC-0.15□□□□□ -2.43
Cspg4Q8VHY0 Gm44469-201ENSMUST00000198558 79 ntBASIC-0.15□□□□□ -2.43
Cspg4Q8VHY0 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC-0.15□□□□□ -2.43
Cspg4Q8VHY0 AC153864.2-201ENSMUST00000220424 292 ntBASIC-0.15□□□□□ -2.43
Cspg4Q8VHY0 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC-0.15□□□□□ -2.43
Cspg4Q8VHY0 AC138667.2-201ENSMUST00000224880 598 ntBASIC-0.15□□□□□ -2.43
Cspg4Q8VHY0 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC-0.15□□□□□ -2.43
Cspg4Q8VHY0 AC127302.3-201ENSMUST00000215480 2791 ntBASIC-0.15□□□□□ -2.43
Cspg4Q8VHY0 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC-0.15□□□□□ -2.43
Cspg4Q8VHY0 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC-0.15□□□□□ -2.43
Cspg4Q8VHY0 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC-0.15□□□□□ -2.43
Cspg4Q8VHY0 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC-0.15□□□□□ -2.43
Cspg4Q8VHY0 Gm23853-201ENSMUST00000158375 104 ntBASIC-0.15□□□□□ -2.43
Cspg4Q8VHY0 Gm37313-201ENSMUST00000191673 290 ntBASIC-0.15□□□□□ -2.43
Cspg4Q8VHY0 Gm37709-201ENSMUST00000195074 600 ntBASIC-0.15□□□□□ -2.43
Cspg4Q8VHY0 Ighv1-32-201ENSMUST00000195149 351 ntBASIC-0.15□□□□□ -2.43
Cspg4Q8VHY0 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC-0.15□□□□□ -2.43
Cspg4Q8VHY0 AC113305.1-201ENSMUST00000214664 724 ntBASIC-0.15□□□□□ -2.43
Cspg4Q8VHY0 Gm7495-201ENSMUST00000215099 426 ntBASIC-0.15□□□□□ -2.43
Cspg4Q8VHY0 Gm5955-201ENSMUST00000222712 219 ntBASIC-0.15□□□□□ -2.43
Cspg4Q8VHY0 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.15□□□□□ -2.43
Cspg4Q8VHY0 Gm37630-201ENSMUST00000194210 1456 ntBASIC-0.16□□□□□ -2.43
Cspg4Q8VHY0 Gm24833-201ENSMUST00000116775 120 ntBASIC-0.16□□□□□ -2.43
Cspg4Q8VHY0 Gm24141-201ENSMUST00000122776 115 ntBASIC-0.16□□□□□ -2.43
Cspg4Q8VHY0 Atp2b4-208ENSMUST00000167348 243 ntBASIC-0.16□□□□□ -2.43
Cspg4Q8VHY0 Gm24137-201ENSMUST00000180055 79 ntBASIC-0.16□□□□□ -2.43
Cspg4Q8VHY0 Gm22391-201ENSMUST00000180356 79 ntBASIC-0.16□□□□□ -2.43
Cspg4Q8VHY0 Mir7043-201ENSMUST00000184219 70 ntBASIC-0.16□□□□□ -2.43
Cspg4Q8VHY0 AC104832.1-201ENSMUST00000222938 550 ntBASIC-0.16□□□□□ -2.43
Cspg4Q8VHY0 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC-0.16□□□□□ -2.43
Cspg4Q8VHY0 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.16□□□□□ -2.43
Cspg4Q8VHY0 Gm22786-201ENSMUST00000104086 122 ntBASIC-0.16□□□□□ -2.44
Cspg4Q8VHY0 Gm11856-201ENSMUST00000118712 276 ntBASIC-0.16□□□□□ -2.44
Cspg4Q8VHY0 Gm11794-201ENSMUST00000119446 237 ntBASIC-0.16□□□□□ -2.44
Cspg4Q8VHY0 Gm12881-201ENSMUST00000121191 203 ntBASIC-0.16□□□□□ -2.44
Cspg4Q8VHY0 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC-0.16□□□□□ -2.44
Cspg4Q8VHY0 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC-0.16□□□□□ -2.44
Cspg4Q8VHY0 AC167229.1-201ENSMUST00000220057 469 ntBASIC-0.16□□□□□ -2.44
Cspg4Q8VHY0 Gm23628-201ENSMUST00000082464 173 ntBASIC-0.16□□□□□ -2.44
Cspg4Q8VHY0 Mir340-201ENSMUST00000083483 98 ntBASIC-0.16□□□□□ -2.44
Cspg4Q8VHY0 Defa-ps13-201ENSMUST00000120695 204 ntBASIC-0.17□□□□□ -2.44
Cspg4Q8VHY0 Gm24854-201ENSMUST00000158025 98 ntBASIC-0.17□□□□□ -2.44
Cspg4Q8VHY0 Gm18396-201ENSMUST00000177095 361 ntBASIC-0.17□□□□□ -2.44
Cspg4Q8VHY0 Gm20257-202ENSMUST00000188643 130 ntBASIC-0.17□□□□□ -2.44
Cspg4Q8VHY0 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC-0.17□□□□□ -2.44
Cspg4Q8VHY0 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC-0.17□□□□□ -2.44
Cspg4Q8VHY0 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC-0.17□□□□□ -2.44
Cspg4Q8VHY0 AC154552.7-201ENSMUST00000222824 156 ntBASIC-0.17□□□□□ -2.44
Cspg4Q8VHY0 AC139294.2-201ENSMUST00000227159 285 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms