Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 AC167192.4-201ENSMUST00000224087 993 ntBASIC0.27□□□□□ -2.37
Nup35Q8R4R6 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
Nup35Q8R4R6 Gm24623-201ENSMUST00000082616 194 ntBASIC0.27□□□□□ -2.37
Nup35Q8R4R6 Gm22884-201ENSMUST00000083127 140 ntBASIC0.27□□□□□ -2.37
Nup35Q8R4R6 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC0.26□□□□□ -2.37
Nup35Q8R4R6 Gm14922-201ENSMUST00000121131 163 ntBASIC0.26□□□□□ -2.37
Nup35Q8R4R6 Gm26152-201ENSMUST00000157427 101 ntBASIC0.26□□□□□ -2.37
Nup35Q8R4R6 Gm23672-201ENSMUST00000157471 107 ntBASIC0.26□□□□□ -2.37
Nup35Q8R4R6 Gm25976-201ENSMUST00000158695 130 ntBASIC0.26□□□□□ -2.37
Nup35Q8R4R6 Gm25750-201ENSMUST00000175483 112 ntBASIC0.26□□□□□ -2.37
Nup35Q8R4R6 Gm22565-201ENSMUST00000175540 69 ntBASIC0.26□□□□□ -2.37
Nup35Q8R4R6 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC0.26□□□□□ -2.37
Nup35Q8R4R6 Gm44282-201ENSMUST00000203199 190 ntBASIC0.26□□□□□ -2.37
Nup35Q8R4R6 Gm44954-201ENSMUST00000208513 227 ntBASIC0.26□□□□□ -2.37
Nup35Q8R4R6 Gm45704-201ENSMUST00000212582 403 ntBASIC0.26□□□□□ -2.37
Nup35Q8R4R6 AC124346.1-201ENSMUST00000218539 364 ntBASIC0.26□□□□□ -2.37
Nup35Q8R4R6 AC156574.2-201ENSMUST00000228023 282 ntBASIC0.26□□□□□ -2.37
Nup35Q8R4R6 Mir350-201ENSMUST00000083639 99 ntBASIC0.26□□□□□ -2.37
Nup35Q8R4R6 Gm11859-201ENSMUST00000118099 455 ntBASIC0.25□□□□□ -2.37
Nup35Q8R4R6 Gm14884-201ENSMUST00000120456 196 ntBASIC0.25□□□□□ -2.37
Nup35Q8R4R6 Gm24630-201ENSMUST00000122768 106 ntBASIC0.25□□□□□ -2.37
Nup35Q8R4R6 Gm22143-201ENSMUST00000157401 203 ntBASIC0.25□□□□□ -2.37
Nup35Q8R4R6 Gm24418-201ENSMUST00000177597 79 ntBASIC0.25□□□□□ -2.37
Nup35Q8R4R6 Gm24639-201ENSMUST00000178518 79 ntBASIC0.25□□□□□ -2.37
Nup35Q8R4R6 Gm23076-201ENSMUST00000179082 79 ntBASIC0.25□□□□□ -2.37
Nup35Q8R4R6 Gm25077-201ENSMUST00000179157 79 ntBASIC0.25□□□□□ -2.37
Nup35Q8R4R6 Gm27289-201ENSMUST00000183341 82 ntBASIC0.25□□□□□ -2.37
Nup35Q8R4R6 Gm27236-201ENSMUST00000184147 442 ntBASIC0.25□□□□□ -2.37
Nup35Q8R4R6 Mir195b-201ENSMUST00000184814 97 ntBASIC0.25□□□□□ -2.37
Nup35Q8R4R6 Gm44921-201ENSMUST00000205290 301 ntBASIC0.25□□□□□ -2.37
Nup35Q8R4R6 Gm24625-201ENSMUST00000082622 130 ntBASIC0.25□□□□□ -2.37
Nup35Q8R4R6 Gm24523-201ENSMUST00000083965 132 ntBASIC0.25□□□□□ -2.37
Nup35Q8R4R6 Gm4746-201ENSMUST00000120395 2406 ntBASIC0.25□□□□□ -2.37
Nup35Q8R4R6 Gm12433-201ENSMUST00000119659 255 ntBASIC0.24□□□□□ -2.37
Nup35Q8R4R6 Gm22281-201ENSMUST00000157198 103 ntBASIC0.24□□□□□ -2.37
Nup35Q8R4R6 Mir3079-201ENSMUST00000175428 90 ntBASIC0.24□□□□□ -2.37
Nup35Q8R4R6 Gm28688-201ENSMUST00000187301 268 ntBASIC0.24□□□□□ -2.37
Nup35Q8R4R6 CT009733.1-203ENSMUST00000224033 451 ntBASIC0.24□□□□□ -2.37
Nup35Q8R4R6 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.24□□□□□ -2.37
Nup35Q8R4R6 Gm22673-201ENSMUST00000104415 131 ntBASIC0.23□□□□□ -2.37
Nup35Q8R4R6 Gm14269-201ENSMUST00000120455 306 ntBASIC0.23□□□□□ -2.37
Nup35Q8R4R6 Gm14846-201ENSMUST00000121868 216 ntBASIC0.23□□□□□ -2.37
Nup35Q8R4R6 Gm23435-201ENSMUST00000157183 156 ntBASIC0.23□□□□□ -2.37
Nup35Q8R4R6 Gm25393-201ENSMUST00000157336 285 ntBASIC0.23□□□□□ -2.37
Nup35Q8R4R6 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC0.23□□□□□ -2.37
Nup35Q8R4R6 Gm22308-201ENSMUST00000177609 107 ntBASIC0.23□□□□□ -2.37
Nup35Q8R4R6 Gm20257-202ENSMUST00000188643 130 ntBASIC0.23□□□□□ -2.37
Nup35Q8R4R6 Gm28848-201ENSMUST00000189984 168 ntBASIC0.23□□□□□ -2.37
Nup35Q8R4R6 Gm28921-201ENSMUST00000190219 378 ntBASIC0.23□□□□□ -2.37
Nup35Q8R4R6 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC0.23□□□□□ -2.37
Nup35Q8R4R6 Gm38333-201ENSMUST00000193608 604 ntBASIC0.23□□□□□ -2.37
Nup35Q8R4R6 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC0.23□□□□□ -2.37
Nup35Q8R4R6 Gm26326-201ENSMUST00000083070 129 ntBASIC0.23□□□□□ -2.37
Nup35Q8R4R6 Gm23969-201ENSMUST00000083324 74 ntBASIC0.23□□□□□ -2.37
Nup35Q8R4R6 Mir101a-201ENSMUST00000083517 83 ntBASIC0.23□□□□□ -2.37
Nup35Q8R4R6 Mir410-201ENSMUST00000083563 81 ntBASIC0.23□□□□□ -2.37
Nup35Q8R4R6 Mir10b-201ENSMUST00000083566 68 ntBASIC0.23□□□□□ -2.37
Nup35Q8R4R6 Mir324-201ENSMUST00000083600 89 ntBASIC0.23□□□□□ -2.37
Nup35Q8R4R6 Gm24258-201ENSMUST00000083739 133 ntBASIC0.23□□□□□ -2.37
Nup35Q8R4R6 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.23□□□□□ -2.37
Nup35Q8R4R6 Mir743b-201ENSMUST00000104751 77 ntBASIC0.22□□□□□ -2.37
Nup35Q8R4R6 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
Nup35Q8R4R6 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC0.22□□□□□ -2.37
Nup35Q8R4R6 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC0.22□□□□□ -2.37
Nup35Q8R4R6 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.22□□□□□ -2.37
Nup35Q8R4R6 AC130821.1-201ENSMUST00000221997 293 ntBASIC0.22□□□□□ -2.37
Nup35Q8R4R6 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.22□□□□□ -2.37
Nup35Q8R4R6 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC0.22□□□□□ -2.37
Nup35Q8R4R6 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.22□□□□□ -2.37
Nup35Q8R4R6 CT009713.9-201ENSMUST00000223604 389 ntBASIC0.22□□□□□ -2.37
Nup35Q8R4R6 Gm22704-201ENSMUST00000083027 137 ntBASIC0.22□□□□□ -2.37
Nup35Q8R4R6 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC0.22□□□□□ -2.37
Nup35Q8R4R6 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
Nup35Q8R4R6 Gm25170-201ENSMUST00000104191 129 ntBASIC0.21□□□□□ -2.38
Nup35Q8R4R6 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.21□□□□□ -2.38
Nup35Q8R4R6 Gm26149-201ENSMUST00000157432 108 ntBASIC0.21□□□□□ -2.38
Nup35Q8R4R6 Gm23008-201ENSMUST00000158946 80 ntBASIC0.21□□□□□ -2.38
Nup35Q8R4R6 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC0.21□□□□□ -2.38
Nup35Q8R4R6 Gm26116-201ENSMUST00000175600 77 ntBASIC0.21□□□□□ -2.38
Nup35Q8R4R6 Gm17906-201ENSMUST00000202480 901 ntBASIC0.21□□□□□ -2.38
Nup35Q8R4R6 Gm44828-201ENSMUST00000203745 106 ntBASIC0.21□□□□□ -2.38
Nup35Q8R4R6 AC134334.1-201ENSMUST00000214277 255 ntBASIC0.21□□□□□ -2.38
Nup35Q8R4R6 AC156790.3-201ENSMUST00000226200 254 ntBASIC0.21□□□□□ -2.38
Nup35Q8R4R6 Gm23055-201ENSMUST00000082805 94 ntBASIC0.21□□□□□ -2.38
Nup35Q8R4R6 Gm24921-201ENSMUST00000083024 107 ntBASIC0.21□□□□□ -2.38
Nup35Q8R4R6 Gm25582-201ENSMUST00000083412 110 ntBASIC0.21□□□□□ -2.38
Nup35Q8R4R6 Mir16-2-201ENSMUST00000083672 95 ntBASIC0.21□□□□□ -2.38
Nup35Q8R4R6 Gm14568-201ENSMUST00000119321 294 ntBASIC0.2□□□□□ -2.38
Nup35Q8R4R6 Gm13729-201ENSMUST00000120328 406 ntBASIC0.2□□□□□ -2.38
Nup35Q8R4R6 Gm26285-201ENSMUST00000177923 107 ntBASIC0.2□□□□□ -2.38
Nup35Q8R4R6 Gm27313-201ENSMUST00000183500 142 ntBASIC0.2□□□□□ -2.38
Nup35Q8R4R6 Mir6389-201ENSMUST00000183661 102 ntBASIC0.2□□□□□ -2.38
Nup35Q8R4R6 Gm29350-201ENSMUST00000189141 541 ntBASIC0.2□□□□□ -2.38
Nup35Q8R4R6 Mir703-201ENSMUST00000197105 109 ntBASIC0.2□□□□□ -2.38
Nup35Q8R4R6 Gm44990-201ENSMUST00000203922 217 ntBASIC0.2□□□□□ -2.38
Nup35Q8R4R6 Gm45315-201ENSMUST00000209283 333 ntBASIC0.2□□□□□ -2.38
Nup35Q8R4R6 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.2□□□□□ -2.38
Nup35Q8R4R6 AC173345.2-201ENSMUST00000222795 153 ntBASIC0.2□□□□□ -2.38
Nup35Q8R4R6 AC183092.1-201ENSMUST00000224301 153 ntBASIC0.2□□□□□ -2.38
Nup35Q8R4R6 Gm23622-201ENSMUST00000082460 107 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 336.8 ms